Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,408,072 |
A→G |
T180A (ACG→GCG) |
dbpA → |
ATP‑dependent RNA helicase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,408,072 | 0 | A | G | 99.6%
| 817.8
/ ‑4.6
| 242 | T180A (ACG→GCG) | dbpA | ATP‑dependent RNA helicase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (130/110); total (131/111) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.11e-01 |
Only 100 of 247 total aligned reads displayed.
CTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGACGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCA > NC_000913/1407982‑1408161
|
ggTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCt < 1:4175647/93‑1 (MQ=255)
tGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTc < 1:5011476/93‑1 (MQ=255)
tGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTc > 2:3501032/1‑93 (MQ=255)
tgAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTc < 2:5289106/93‑1 (MQ=255)
tgAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTc < 1:6465715/93‑1 (MQ=255)
tgAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTc > 2:5998262/1‑93 (MQ=255)
aGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCgg > 2:3312984/1‑93 (MQ=255)
ggCCGACCGCATGCTGGATCTGGGATTTAGCGATGCCATTGATGATGTCCTCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCCGc > 1:3039040/1‑93 (MQ=255)
gCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCa > 2:3786499/1‑93 (MQ=255)
gCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCa > 1:5957668/1‑93 (MQ=255)
ccGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCaa < 2:5083728/93‑1 (MQ=255)
cGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAAc < 1:2589185/93‑1 (MQ=255)
gACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAAcc > 2:5748130/1‑93 (MQ=255)
aCCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCt < 1:3413235/93‑1 (MQ=255)
ccGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTg < 2:4538914/93‑1 (MQ=255)
cGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTgg < 1:2227327/93‑1 (MQ=255)
gCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGc < 2:5430978/93‑1 (MQ=255)
aTGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCg > 2:4539776/1‑93 (MQ=255)
tGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCgg > 2:3872721/1‑93 (MQ=255)
tGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCgg > 1:3110855/1‑93 (MQ=255)
tGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCgg < 2:3565887/93‑1 (MQ=255)
tGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCgg > 2:1166098/1‑93 (MQ=255)
cTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGaa < 1:875355/93‑1 (MQ=255)
cTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGaa < 2:1816720/93‑1 (MQ=255)
tGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAg > 2:2320949/1‑93 (MQ=255)
gATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGcc < 1:1292380/93‑1 (MQ=255)
tatGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCAt > 2:4215110/1‑93 (MQ=255)
atGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATc < 2:4402607/93‑1 (MQ=255)
atGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATc < 2:178083/93‑1 (MQ=255)
gggATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGc > 2:6396376/1‑93 (MQ=255)
gggATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGc > 2:3224977/1‑93 (MQ=255)
aTTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGc > 2:269543/1‑93 (MQ=255)
tttAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCa > 1:2473949/1‑93 (MQ=255)
ttAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCaa > 2:762833/1‑93 (MQ=255)
ttAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCaa < 2:3674910/93‑1 (MQ=255)
tAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCCAt > 1:5170276/1‑93 (MQ=255)
tgCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATc < 2:6478736/92‑1 (MQ=255)
aGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATc > 2:4941463/1‑93 (MQ=255)
aGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATc < 1:4237131/93‑1 (MQ=255)
aGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATc < 1:4711281/93‑1 (MQ=255)
gCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCCATCa > 1:3577814/1‑93 (MQ=255)
gCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCa < 1:2674218/93‑1 (MQ=255)
gATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGc > 1:2429232/1‑93 (MQ=255)
gATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGc > 2:2194454/1‑93 (MQ=255)
aTGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCg > 1:717945/1‑93 (MQ=255)
aTGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCg < 2:10294/93‑1 (MQ=255)
aTGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCCGCAATCAGCg > 1:1973398/1‑93 (MQ=255)
tGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCgg > 2:636168/1‑93 (MQ=255)
gCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGa < 1:3859111/93‑1 (MQ=255)
gCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGa > 2:2898316/1‑93 (MQ=255)
tcATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGAc < 2:2434715/92‑1 (MQ=255)
ccATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGAc > 1:3639633/1‑93 (MQ=255)
ccATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGAc > 1:3136665/1‑93 (MQ=255)
cATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACg > 2:4741080/1‑93 (MQ=255)
cATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACg > 1:1138273/1‑93 (MQ=255)
cATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACg < 1:3184795/93‑1 (MQ=255)
cATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACg > 1:4554155/1‑93 (MQ=255)
aTTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGa > 1:2816281/1‑93 (MQ=255)
ttGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAg > 1:6217152/1‑93 (MQ=255)
ttGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAg < 2:838965/93‑1 (MQ=255)
ttGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGACGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAg > 1:5299687/1‑93 (MQ=255)
ttGATGATGTCATCCATTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAg < 1:4932869/93‑1 (MQ=255)
tgatgaTGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGt < 2:6099844/93‑1 (MQ=255)
gatgatGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTg > 1:3282383/1‑93 (MQ=255)
atgatgTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTACTGTTTTCGGCATCCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGc < 2:2996928/93‑1 (MQ=255)
gatgTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCac > 2:2035569/1‑92 (MQ=255)
gatgTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCaa > 1:1781685/1‑93 (MQ=255)
atgTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAAc > 2:5050631/1‑93 (MQ=255)
atgTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAAc < 1:4312062/93‑1 (MQ=255)
atgTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAAc > 1:2207292/1‑93 (MQ=255)
atgTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAAc > 1:1568293/1‑93 (MQ=255)
tgTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAAcg > 1:1055105/1‑93 (MQ=255)
aTCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGAt < 2:1326514/93‑1 (MQ=255)
aTCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGAt < 1:6378590/93‑1 (MQ=255)
tCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATc < 2:587583/93‑1 (MQ=255)
tCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGGTTTTGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATc > 2:4652726/1‑93 (MQ=255)
ccGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATcc < 1:334392/93‑1 (MQ=255)
cGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCt < 2:727812/93‑1 (MQ=255)
cGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGACTGCAACGCGATCCt < 1:5546359/93‑1 (MQ=255)
gTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCtt > 2:517192/1‑93 (MQ=255)
gTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCtt < 2:798059/93‑1 (MQ=255)
gTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCtt < 1:2965524/93‑1 (MQ=255)
ttttGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCttt < 2:1288501/93‑1 (MQ=255)
tttGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTg < 1:3975751/93‑1 (MQ=255)
tGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGc < 1:5625340/93‑1 (MQ=255)
gcCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGAt > 2:1881313/1‑93 (MQ=255)
ccTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGAtt > 2:5355564/1‑93 (MQ=255)
cTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTg > 1:4358567/1‑93 (MQ=255)
tGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGa > 2:1732261/1‑93 (MQ=255)
tGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGa > 1:5441446/1‑93 (MQ=255)
cATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGaaa > 1:4827376/1‑93 (MQ=255)
tctcGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAAtt < 1:6126242/93‑1 (MQ=255)
tctcGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAAtt < 1:6049345/93‑1 (MQ=255)
ctcGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTg > 2:1636319/1‑93 (MQ=255)
tcGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGa > 2:3158687/1‑93 (MQ=255)
tcGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGa < 2:4096367/93‑1 (MQ=255)
cGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGAc > 2:1763943/1‑93 (MQ=255)
cGAAAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGAc < 2:866982/93‑1 (MQ=255)
aCAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTc > 1:100857/1‑93 (MQ=255)
aCAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTc < 2:2599095/93‑1 (MQ=255)
|
CTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGACGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCA > NC_000913/1407982‑1408161
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGACGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACAG > NC_000913/1407979‑1408165
|
ACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGG < SRR4302534.5611213/94‑1 (MQ=60)
ACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGG < SRR4302534.1174472/94‑1 (MQ=60)
ACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGG > SRR4302534.5403804/1‑94 (MQ=60)
ACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCACTGATGACGTCATCCGTTTTGCGCCTGCATCTCGACAGG > SRR4302534.4187378/1‑94 (MQ=60)
CGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGC > SRR4302534.290352/1‑94 (MQ=60)
GCTGGTGATGGATGAGGCCGTCCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCG > SRR4302534.6481003/1‑94 (MQ=60)
GCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCG < SRR4302534.1172074/94‑1 (MQ=60)
GCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCG < SRR4302534.4327478/94‑1 (MQ=60)
TGGTGATGGATGAGGCCGACCGCATTCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCT < SRR4302534.1302841/94‑1 (MQ=60)
GGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTT < SRR4302534.4288437/94‑1 (MQ=60)
GTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTC < SRR4302534.5206590/94‑1 (MQ=60)
GTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTC < SRR4302534.5777388/94‑1 (MQ=60)
TGATGGATGAGGCCTACCGCATGCTGGCTATGGCATTTAGCGATCCAATTGATGATGTCATCCGTTTTGTGCCTGCATCTCGACAGGCGCTTCT < SRR4302534.4791838/94‑1 (MQ=60)
TGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCT < SRR4302534.5146922/94‑1 (MQ=60)
TGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCT > SRR4302534.3673114/1‑94 (MQ=60)
GATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTG < SRR4302534.3193849/94‑1 (MQ=60)
GATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTG > SRR4302534.5719553/1‑94 (MQ=60)
ATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGT > SRR4302534.2183561/1‑94 (MQ=60)
TGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTT > SRR4302534.6341067/1‑94 (MQ=60)
GGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTT > SRR4302534.2621648/1‑94 (MQ=60)
ATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTC < SRR4302534.4564464/94‑1 (MQ=60)
ATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTC > SRR4302534.4782024/1‑94 (MQ=60)
TGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCG < SRR4302534.6639861/94‑1 (MQ=60)
GAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGG < SRR4302534.4946087/94‑1 (MQ=60)
GAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGG > SRR4302534.2363304/1‑94 (MQ=60)
AGGCCGACCGCATGCTGGATCTGGGATTTAGCGATGCCATTGATGATGTCCTCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCCGC > SRR4302534.3118730/1‑94 (MQ=60)
AGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGC > SRR4302534.2278221/1‑94 (MQ=60)
AGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGC < SRR4302534.437453/94‑1 (MQ=60)
GGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCA < SRR4302534.6049237/94‑1 (MQ=60)
GGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCA > SRR4302534.6119432/1‑94 (MQ=60)
GCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAA > SRR4302534.5082261/1‑94 (MQ=60)
CGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACC < SRR4302534.2657724/94‑1 (MQ=60)
CGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACC > SRR4302534.5503132/1‑94 (MQ=60)
CGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACC < SRR4302534.3265628/94‑1 (MQ=60)
CGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACC > SRR4302534.4307237/1‑94 (MQ=60)
GACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCT < SRR4302534.631161/94‑1 (MQ=60)
GACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCT < SRR4302534.1137898/94‑1 (MQ=60)
ACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTG < SRR4302534.3504910/94‑1 (MQ=60)
CCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGG < SRR4302534.4198878/94‑1 (MQ=60)
CCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGG < SRR4302534.4474891/94‑1 (MQ=60)
CGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGC < SRR4302534.248535/94‑1 (MQ=60)
CGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGC < SRR4302534.2286318/94‑1 (MQ=60)
GCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCC < SRR4302534.2660589/94‑1 (MQ=60)
CATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCG > SRR4302534.655843/1‑94 (MQ=60)
ATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGG > SRR4302534.4481635/1‑94 (MQ=60)
ATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGG > SRR4302534.3192662/1‑94 (MQ=60)
CTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAG < SRR4302534.3260393/94‑1 (MQ=60)
CTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAG < SRR4302534.897501/94‑1 (MQ=60)
GGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCC > SRR4302534.6222354/1‑94 (MQ=60)
GATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCA < SRR4302534.691637/94‑1 (MQ=60)
GATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCA < SRR4302534.1326415/94‑1 (MQ=60)
ATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCG > SRR4302534.3177477/1‑94 (MQ=60)
TGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGC < SRR4302534.3983307/94‑1 (MQ=60)
GGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTG > SRR4302534.529808/1‑94 (MQ=60)
GATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGC < SRR4302534.1197163/94‑1 (MQ=60)
ATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCA < SRR4302534.3082433/94‑1 (MQ=60)
ATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCA > SRR4302534.2539688/1‑94 (MQ=60)
TTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAA > SRR4302534.3271501/1‑94 (MQ=60)
TTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCCAT > SRR4302534.5309634/1‑94 (MQ=60)
AGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCCATCA > SRR4302534.3674049/1‑94 (MQ=60)
AGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCA < SRR4302534.4839194/94‑1 (MQ=60)
AGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCA > SRR4302534.2939768/1‑94 (MQ=60)
AGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCA < SRR4302534.4351354/94‑1 (MQ=60)
AGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCA > SRR4302534.4243171/1‑94 (MQ=60)
AGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCA < SRR4302534.4881467/94‑1 (MQ=60)
GCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAG < SRR4302534.2744922/94‑1 (MQ=60)
CGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGC > SRR4302534.2493816/1‑94 (MQ=60)
GATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCG > SRR4302534.735650/1‑94 (MQ=60)
GATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCCGCAATCAGCG > SRR4302534.2025054/1‑94 (MQ=60)
ATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGG > SRR4302534.1576902/1‑94 (MQ=60)
ATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGG < SRR4302534.2534187/94‑1 (MQ=60)
GCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGAC > SRR4302534.3737450/1‑94 (MQ=60)
GCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGAC < SRR4302534.3962727/94‑1 (MQ=60)
GCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGAC > SRR4302534.3219151/1‑94 (MQ=60)
CCTTTGATGATGTCAGCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACG < SRR4302534.221031/94‑1 (MQ=60)
CCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACG > SRR4302534.4677610/1‑94 (MQ=60)
CCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACG > SRR4302534.1168049/1‑94 (MQ=60)
CATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGA > SRR4302534.4979332/1‑94 (MQ=60)
CATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGA > SRR4302534.2890333/1‑94 (MQ=60)
CATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGA < SRR4302534.3269013/94‑1 (MQ=60)
ATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCTGAAGCCATCGCTGCAATCAGCGGACGAG > SRR4302534.1612147/1‑94 (MQ=60)
ATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAG > SRR4302534.6386060/1‑94 (MQ=60)
ATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGACGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAG > SRR4302534.5442701/1‑94 (MQ=60)
TTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGT < SRR4302534.3791336/94‑1 (MQ=60)
TTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGT < SRR4302534.894188/94‑1 (MQ=60)
TTGATGATGTCATCCATTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGT < SRR4302534.5066561/94‑1 (MQ=60)
TGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTG < SRR4302534.2747040/94‑1 (MQ=60)
TGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTG > SRR4302534.3369871/1‑94 (MQ=60)
GATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGC > SRR4302534.1064618/1‑94 (MQ=60)
ATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCA > SRR4302534.1994561/1‑94 (MQ=60)
ATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGCGCA > SRR4302534.5575407/1‑94 (MQ=60)
TGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAA > SRR4302534.1827946/1‑94 (MQ=60)
TGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAA > SRR4302534.5354230/1‑94 (MQ=60)
GATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAAC > SRR4302534.1609367/1‑94 (MQ=60)
GATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAAC > SRR4302534.2265724/1‑94 (MQ=60)
GATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAAC < SRR4302534.5590874/94‑1 (MQ=60)
ATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACG < SRR4302534.4428881/94‑1 (MQ=60)
ATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACG < SRR4302534.4379740/94‑1 (MQ=60)
ATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACG > SRR4302534.1082418/1‑94 (MQ=60)
CATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGAT < SRR4302534.925283/94‑1 (MQ=60)
ATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATC > SRR4302534.2754282/1‑94 (MQ=60)
ATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATC < SRR4302534.6550877/94‑1 (MQ=60)
CCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCT < SRR4302534.342967/94‑1 (MQ=60)
CGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGACTGCAACGCGATCCTT < SRR4302534.5696071/94‑1 (MQ=60)
GTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGGCGAGTGCAACGCGATCCTTT > SRR4302534.5012288/1‑94 (MQ=60)
GTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTT < SRR4302534.3043191/94‑1 (MQ=60)
GTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTGCGGCAACCTGGCCGGAGGCCATCGCTGCAATCAGCGGACGAGTGCAACGCTATCCTTT < SRR4302534.3110842/94‑1 (MQ=60)
TTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGG < SRR4302534.4082154/94‑1 (MQ=60)
TGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCG < SRR4302534.5777578/94‑1 (MQ=60)
CCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTG > SRR4302534.3674266/1‑94 (MQ=60)
CCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTG > SRR4302534.4476163/1‑94 (MQ=60)
CTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGA > SRR4302534.5588023/1‑94 (MQ=60)
CTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGA > SRR4302534.3519618/1‑94 (MQ=60)
CTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGA > SRR4302534.6199005/1‑94 (MQ=60)
CTGCAGCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACACGATCCTTTGGCGATTGA < SRR4302534.1490439/94‑1 (MQ=60)
TGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAA < SRR4302534.839318/94‑1 (MQ=60)
TGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAA > SRR4302534.3377722/1‑94 (MQ=60)
GCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAA > SRR4302534.4958366/1‑94 (MQ=60)
ATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATT < SRR4302534.3482256/94‑1 (MQ=60)
ATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATT < SRR4302534.3426584/94‑1 (MQ=60)
TCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTG > SRR4302534.1767751/1‑94 (MQ=60)
TCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTG < SRR4302534.6292871/94‑1 (MQ=60)
TCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTG < SRR4302534.6213805/94‑1 (MQ=60)
CTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGA > SRR4302534.6597016/1‑94 (MQ=60)
TCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGCGCAACGCGATCCTTTGGCGATTGAAATTGAC > SRR4302534.2585693/1‑94 (MQ=60)
GACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTC > SRR4302534.103548/1‑94 (MQ=60)
ACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCA < SRR4302534.6145989/94‑1 (MQ=60)
ACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGAGCAACGCGTTCCTTTGGCGATTGAAATTGACTCA > SRR4302534.3907684/1‑94 (MQ=60)
CAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAA > SRR4302534.403434/1‑94 (MQ=60)
CAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAA > SRR4302534.1180020/1‑94 (MQ=60)
AGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAAC > SRR4302534.5652227/1‑94 (MQ=60)
AGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAAC < SRR4302534.3720605/94‑1 (MQ=60)
AGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAAC > SRR4302534.1663845/1‑94 (MQ=60)
AGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAAC > SRR4302534.3956418/1‑94 (MQ=60)
AGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAAA > SRR4302534.2222345/1‑94 (MQ=60)
AGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGAGCCTTTGGCGATTGAAATTGACTCAAC > SRR4302534.5344564/1‑94 (MQ=60)
AGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGGGCAACGAGATCCTTTGGCGATTGAAATTGACTCAAC > SRR4302534.3913798/1‑94 (MQ=60)
GGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACA < SRR4302534.2367719/94‑1 (MQ=60)
GCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACAG > SRR4302534.807462/1‑94 (MQ=60)
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ACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGACGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACAG > NC_000913/1407979‑1408165
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
