Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,408,072 A→G T180A (ACG→GCG)  dbpA → ATP‑dependent RNA helicase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,408,0720AG100.0% 1115.2 / NA 326T180A (ACG→GCG) dbpAATP‑dependent RNA helicase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (173/153);  total (173/153)

Only 100 of 343 total aligned reads displayed.

CTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGACGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCA  >  NC_000913/1407982‑1408161
                                                                                          |                                                                                         
 tGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGgcgc                                                                                        <  2:5999828/93‑1 (MQ=255)
  ggTGATGGATGAGGCCGACCGCATGCTGGTTATGGGATTTAGCGCTGCCATTGATGATGTCATCCGTTTTGCGCCTGCCTCTCGACAGGCGCt                                                                                       >  1:1066882/1‑93 (MQ=255)
  ggTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCt                                                                                       <  2:8760029/93‑1 (MQ=255)
   gtggtgGGTGAGGCTGACCTCATGGGCGATATCGGATTGAGCGATTCCATTGATGATTTAATCCGTTTTGCGCCTGCATCTCGACAGGCGCtt                                                                                      <  2:1197577/93‑1 (MQ=255)
    tGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTc                                                                                     <  1:3251871/93‑1 (MQ=255)
    tGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTc                                                                                     <  2:3041206/93‑1 (MQ=255)
      atggatgAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTg                                                                                   <  2:5114134/93‑1 (MQ=255)
      atggatgAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTg                                                                                   >  2:2182196/1‑93 (MQ=255)
       tggatgAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGt                                                                                  <  1:8524207/93‑1 (MQ=255)
       tggatgAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGt                                                                                  >  1:534712/1‑93 (MQ=255)
         gatgAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGttt                                                                                >  1:2200481/1‑93 (MQ=255)
          atgAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGtttt                                                                               >  2:4351400/1‑93 (MQ=255)
          atgAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGtttt                                                                               >  1:7666682/1‑93 (MQ=255)
           tgAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTc                                                                              <  1:6938123/93‑1 (MQ=255)
            gAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCg                                                                             <  2:4525136/93‑1 (MQ=255)
              ggCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGc                                                                           <  1:1281302/93‑1 (MQ=255)
                  gACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAAcc                                                                       >  2:4263727/1‑93 (MQ=255)
                  gACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAAcc                                                                       >  1:3542248/1‑93 (MQ=255)
                  gACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAAcc                                                                       >  1:1759129/1‑93 (MQ=255)
                  gACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAAcc                                                                       >  1:8228398/1‑93 (MQ=255)
                   aCCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCt                                                                      >  2:6550561/1‑93 (MQ=255)
                   aCCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCt                                                                      <  2:6715627/93‑1 (MQ=255)
                   aCCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCt                                                                      >  2:7265872/1‑93 (MQ=255)
                   aCCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCt                                                                      >  1:75517/1‑93 (MQ=255)
                    ccGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTg                                                                     <  2:6277865/93‑1 (MQ=255)
                    ccGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTg                                                                     <  1:4808483/93‑1 (MQ=255)
                    ccGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTg                                                                     <  1:8191569/93‑1 (MQ=255)
                    ccGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTg                                                                     <  1:8722464/93‑1 (MQ=255)
                    ccGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTg                                                                     >  2:4881021/1‑93 (MQ=255)
                      gCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAATCTGGc                                                                   >  2:1775429/1‑93 (MQ=255)
                      gCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGc                                                                   <  1:3335429/93‑1 (MQ=255)
                        aTGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCg                                                                 <  1:5854085/93‑1 (MQ=255)
                         tGCTGGTTATGGGATTTAGCGAAGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTGTCGGCAACCTGGCCgg                                                                >  2:8089239/1‑93 (MQ=255)
                          gCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGa                                                               >  1:7264218/1‑93 (MQ=255)
                          gCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGa                                                               <  2:3563827/93‑1 (MQ=255)
                          gCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGa                                                               >  2:5220891/1‑93 (MQ=255)
                           cTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGaa                                                              <  1:386871/93‑1 (MQ=255)
                            tGGATATGGTATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAg                                                             <  2:1249431/93‑1 (MQ=255)
                             ggATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGGCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTCGCCGGAAGc                                                            >  2:4958387/1‑93 (MQ=255)
                             ggATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGc                                                            >  2:8434415/1‑93 (MQ=255)
                              gATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGcc                                                           <  1:1519062/93‑1 (MQ=255)
                              gATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGcc                                                           <  1:4279803/93‑1 (MQ=255)
                                tatGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCAt                                                         >  1:4450862/1‑93 (MQ=255)
                                tatGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCAt                                                         >  1:248226/1‑93 (MQ=255)
                                 atGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATc                                                        >  2:5600465/1‑93 (MQ=255)
                                 atGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATc                                                        <  1:293234/93‑1 (MQ=255)
                                   gggATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGc                                                      <  1:5086670/93‑1 (MQ=255)
                                     gATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTg                                                    >  2:3303368/1‑93 (MQ=255)
                                       tttAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCa                                                  >  2:4024386/1‑93 (MQ=255)
                                             gATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGc                                            <  2:8627512/93‑1 (MQ=255)
                                              aTGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCg                                           >  2:160175/1‑93 (MQ=255)
                                              aTGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCg                                           <  1:1141370/93‑1 (MQ=255)
                                                gCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGa                                         >  1:4616053/1‑93 (MQ=255)
                                                  cATTTATGATGTCATCCGCTTTCCGCCGGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACg                                       <  1:6303973/93‑1 (MQ=255)
                                                  cATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACg                                       >  1:976261/1‑93 (MQ=255)
                                                  cATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACg                                       >  1:6137573/1‑93 (MQ=255)
                                                   aTTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGa                                      >  2:2691678/1‑93 (MQ=255)
                                                   aTTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGa                                      >  1:2619626/1‑93 (MQ=255)
                                                    ttGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAg                                     <  1:4731623/93‑1 (MQ=255)
                                                    ttGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAg                                     >  2:6079959/1‑93 (MQ=255)
                                                    ttGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAg                                     >  2:3841178/1‑93 (MQ=255)
                                                    ttGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAg                                     >  1:8004420/1‑93 (MQ=255)
                                                      gatgatGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTg                                   >  2:2714359/1‑93 (MQ=255)
                                                        tgatgTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCa                                 >  1:1971399/1‑93 (MQ=255)
                                                         gatgTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCaa                                <  1:6642911/93‑1 (MQ=255)
                                                          atgTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCacc                               >  2:1918898/1‑91 (MQ=255)
                                                          atgTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAAc                               <  2:5277201/93‑1 (MQ=255)
                                                           tgTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGCAGCCATCGCTGCAATCAGCGGACGAGTGCCAcg                              >  2:227859/1‑93 (MQ=255)
                                                           tgTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAAcg                              >  1:7738886/1‑93 (MQ=255)
                                                             tCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGGAATCAGCGGACGAGTGCAAcgcg                            >  2:5927761/1‑93 (MQ=255)
                                                             tCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAAcgcg                            >  1:6799774/1‑93 (MQ=255)
                                                              cATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGa                           >  2:4083718/1‑93 (MQ=255)
                                                               ctCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGAt                          <  1:2283220/92‑1 (MQ=255)
                                                               aTCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAGTCAGCGGACGAGTGCAACGCGAt                          >  2:4741486/1‑93 (MQ=255)
                                                               aTCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGAt                          >  1:7024452/1‑93 (MQ=255)
                                                                tCCGTTTTGCGCCTGGATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATc                         <  2:681106/93‑1 (MQ=255)
                                                                tCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATc                         >  2:2063227/1‑93 (MQ=255)
                                                                tCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATc                         >  2:5698276/1‑93 (MQ=255)
                                                                   gTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCtt                      >  2:3203518/1‑93 (MQ=255)
                                                                    ttttGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCttt                     >  2:1483465/1‑93 (MQ=255)
                                                                    ttttGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCttt                     <  2:7988218/93‑1 (MQ=255)
                                                                      ttGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTgg                   >  1:6416158/1‑93 (MQ=255)
                                                                       tGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGc                  >  1:7862505/1‑93 (MQ=255)
                                                                         cgcCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGa                <  2:7019799/93‑1 (MQ=255)
                                                                          gcCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGAt               <  1:8771086/93‑1 (MQ=255)
                                                                          gcCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGAt               <  1:7128546/93‑1 (MQ=255)
                                                                          gcCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGAt               <  1:7449906/93‑1 (MQ=255)
                                                                          gcCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGAt               >  1:3838810/1‑93 (MQ=255)
                                                                           ccTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGAtt              <  2:5854981/93‑1 (MQ=255)
                                                                           ccTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGAtt              <  2:7730124/93‑1 (MQ=255)
                                                                             tGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTTGCGATTGa            <  2:2485809/93‑1 (MQ=255)
                                                                             tGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGa            >  1:1620991/1‑93 (MQ=255)
                                                                                 tctcGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAAtt        <  1:790407/93‑1 (MQ=255)
                                                                                   tcGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTgc      >  2:7592908/1‑92 (MQ=255)
                                                                                    cGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGAc     >  1:2967612/1‑93 (MQ=255)
                                                                                    cGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGAc     <  2:8299572/93‑1 (MQ=255)
                                                                                    cGACAGGCGCTTCTGTTTGCGGCAACCTGGCGGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGAc     <  2:346400/93‑1 (MQ=255)
                                                                                     gACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGaat    >  1:6051316/1‑91 (MQ=255)
                                                                                      aCAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTc   <  1:2118079/93‑1 (MQ=255)
                                                                                       cAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCa  <  1:5783097/93‑1 (MQ=255)
                                                                                          |                                                                                         
CTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGACGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCA  >  NC_000913/1407982‑1408161

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGACGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACAG  >  NC_000913/1407979‑1408165
                                                                                             |                                                                                             
ACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGG                                                                                               <  SRR4302541.2769961/94‑1 (MQ=60)
 CGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGC                                                                                              <  SRR4302541.3840331/94‑1 (MQ=60)
 CGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGC                                                                                              >  SRR4302541.7806710/1‑94 (MQ=60)
 CGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGC                                                                                              <  SRR4302541.3313593/94‑1 (MQ=60)
  GCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCG                                                                                             >  SRR4302541.2021709/1‑94 (MQ=60)
   CTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGC                                                                                            <  SRR4302541.5875505/94‑1 (MQ=60)
   CTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGC                                                                                            >  SRR4302541.7833886/1‑94 (MQ=60)
   CTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGC                                                                                            >  SRR4302541.7833887/1‑94 (MQ=60)
    TGGTGATGGATGAGGCCGACCGCATGCTGGTTATGGGATTTAGCGCTGCCATTGATGATGTCATCCGTTTTGCGCCTGCCTCTCGACAGGCGCT                                                                                           >  SRR4302541.1076808/1‑94 (MQ=60)
    TGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCT                                                                                           >  SRR4302541.1195719/1‑94 (MQ=60)
     GGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTT                                                                                          >  SRR4302541.6048122/1‑94 (MQ=60)
       TGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCT                                                                                        <  SRR4302541.3284695/94‑1 (MQ=60)
        GATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTG                                                                                       <  SRR4302541.2567124/94‑1 (MQ=60)
         ATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGTGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGT                                                                                      >  SRR4302541.3402912/1‑94 (MQ=60)
         ATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGT                                                                                      >  SRR4302541.539728/1‑94 (MQ=60)
          TGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTT                                                                                     >  SRR4302541.2987524/1‑94 (MQ=60)
          TGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTT                                                                                     <  SRR4302541.8615931/94‑1 (MQ=60)
           GGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTT                                                                                    >  SRR4302541.2221783/1‑94 (MQ=60)
           GGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTT                                                                                    >  SRR4302541.7746270/1‑94 (MQ=60)
           GGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTT                                                                                    <  SRR4302541.2180173/94‑1 (MQ=60)
           GGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATCCCATTGATGATGTCATCCGCTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTT                                                                                    >  SRR4302541.7988373/1‑94 (MQ=60)
            GATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTT                                                                                   >  SRR4302541.1680275/1‑94 (MQ=60)
            GATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTT                                                                                   >  SRR4302541.7748242/1‑94 (MQ=60)
            GATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTT                                                                                   <  SRR4302541.1689957/94‑1 (MQ=60)
             ATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTC                                                                                  <  SRR4302541.8548706/94‑1 (MQ=60)
             ATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTC                                                                                  <  SRR4302541.3580708/94‑1 (MQ=60)
             ATGAGGCCGACCGCATGCTGGATATGGGAGTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTC                                                                                  <  SRR4302541.542941/94‑1 (MQ=60)
              TGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCG                                                                                 <  SRR4302541.8412352/94‑1 (MQ=60)
              TGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCG                                                                                 <  SRR4302541.7806033/94‑1 (MQ=60)
              TGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCG                                                                                 <  SRR4302541.4790220/94‑1 (MQ=60)
              TGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCG                                                                                 <  SRR4302541.8077036/94‑1 (MQ=60)
              TGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCG                                                                                 <  SRR4302541.2658473/94‑1 (MQ=60)
              TGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCG                                                                                 <  SRR4302541.7012136/94‑1 (MQ=60)
              TGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCG                                                                                 <  SRR4302541.3808197/94‑1 (MQ=60)
                AGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGC                                                                               >  SRR4302541.7246486/1‑94 (MQ=60)
                 GGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCA                                                                              <  SRR4302541.1294010/94‑1 (MQ=60)
                 GGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCA                                                                              <  SRR4302541.7534864/94‑1 (MQ=60)
                 GGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTACTGTTTTCGGCA                                                                              >  SRR4302541.8299729/1‑94 (MQ=60)
                  GCCGACCGCATGCTGGATATGGGATTTCGCGATGCCATTGATGATGTCATCCGTTGTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAA                                                                             <  SRR4302541.1138637/94‑1 (MQ=60)
                  GCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAA                                                                             <  SRR4302541.1138638/94‑1 (MQ=60)
                    CGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACC                                                                           >  SRR4302541.3577992/1‑94 (MQ=60)
                    CGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACC                                                                           <  SRR4302541.3889091/94‑1 (MQ=60)
                    CGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACC                                                                           >  SRR4302541.8318117/1‑94 (MQ=60)
                    CGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACC                                                                           <  SRR4302541.1564169/94‑1 (MQ=60)
                    CGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACC                                                                           >  SRR4302541.1776265/1‑94 (MQ=60)
                    CGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACC                                                                           <  SRR4302541.7682355/94‑1 (MQ=60)
                     GACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCT                                                                          <  SRR4302541.6790481/94‑1 (MQ=60)
                     GACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCT                                                                          >  SRR4302541.76160/1‑94 (MQ=60)
                     GACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCT                                                                          >  SRR4302541.7056449/1‑94 (MQ=60)
                      ACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTG                                                                         >  SRR4302541.2355522/1‑94 (MQ=60)
                      ACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTG                                                                         <  SRR4302541.147456/94‑1 (MQ=60)
                      ACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTG                                                                         <  SRR4302541.637288/94‑1 (MQ=60)
                      ACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTG                                                                         >  SRR4302541.8651132/1‑94 (MQ=60)
                       CCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGG                                                                        >  SRR4302541.8088031/1‑94 (MQ=60)
                       CCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGG                                                                        <  SRR4302541.8280975/94‑1 (MQ=60)
                       CCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGG                                                                        <  SRR4302541.5107011/94‑1 (MQ=60)
                       CCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGG                                                                        <  SRR4302541.4857520/94‑1 (MQ=60)
                       CCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGG                                                                        <  SRR4302541.4758990/94‑1 (MQ=60)
                       CCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGG                                                                        <  SRR4302541.8815736/94‑1 (MQ=60)
                        CGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGC                                                                       >  SRR4302541.7561661/1‑94 (MQ=60)
                         GCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCC                                                                      <  SRR4302541.3368812/94‑1 (MQ=60)
                          CATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCG                                                                     <  SRR4302541.525670/94‑1 (MQ=60)
                          CATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCG                                                                     >  SRR4302541.6429472/1‑94 (MQ=60)
                           ATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGG                                                                    <  SRR4302541.5913617/94‑1 (MQ=60)
                           ATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGG                                                                    <  SRR4302541.3119174/94‑1 (MQ=60)
                            TGCTGGATATGGGATTTAGCGATTCCATTGATGATGTCATCCGTGTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGA                                                                   <  SRR4302541.3327399/94‑1 (MQ=60)
                            TGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGA                                                                   >  SRR4302541.3764344/1‑94 (MQ=60)
                            TGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGA                                                                   >  SRR4302541.7341711/1‑94 (MQ=60)
                            TGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGA                                                                   >  SRR4302541.477945/1‑94 (MQ=60)
                             GCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAA                                                                  <  SRR4302541.7038101/94‑1 (MQ=60)
                              CTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAG                                                                 <  SRR4302541.390440/94‑1 (MQ=60)
                              CTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAG                                                                 <  SRR4302541.390441/94‑1 (MQ=60)
                              CTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAG                                                                 >  SRR4302541.881331/1‑94 (MQ=60)
                               TGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGCCAACCTGGCCGGAAGC                                                                >  SRR4302541.5313746/1‑94 (MQ=60)
                                GGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCC                                                               <  SRR4302541.6095722/94‑1 (MQ=60)
                                 GATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCA                                                              <  SRR4302541.3518061/94‑1 (MQ=60)
                                 GATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCA                                                              <  SRR4302541.4322553/94‑1 (MQ=60)
                                 GATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCA                                                              <  SRR4302541.1534230/94‑1 (MQ=60)
                                  ATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCAT                                                             >  SRR4302541.4495628/1‑94 (MQ=60)
                                  ATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCAT                                                             >  SRR4302541.250207/1‑94 (MQ=60)
                                    ATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCG                                                           <  SRR4302541.295779/94‑1 (MQ=60)
                                    ATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCG                                                           <  SRR4302541.76186/94‑1 (MQ=60)
                                      GGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCT                                                         <  SRR4302541.5138925/94‑1 (MQ=60)
                                        GATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGC                                                       >  SRR4302541.7826227/1‑94 (MQ=60)
                                         ATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCA                                                      >  SRR4302541.2026898/1‑94 (MQ=60)
                                           TTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAAT                                                    <  SRR4302541.2233240/94‑1 (MQ=60)
                                           TTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAAT                                                    >  SRR4302541.6512021/1‑94 (MQ=60)
                                           TTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAAT                                                    >  SRR4302541.4162959/1‑94 (MQ=60)
                                            TAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATC                                                   <  SRR4302541.8862397/94‑1 (MQ=60)
                                            TAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATC                                                   <  SRR4302541.2565780/94‑1 (MQ=60)
                                            TAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATC                                                   <  SRR4302541.8862396/94‑1 (MQ=60)
                                             AGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCA                                                  >  SRR4302541.4344458/1‑94 (MQ=60)
                                             AGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCA                                                  <  SRR4302541.7290704/94‑1 (MQ=60)
                                             AGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCA                                                  >  SRR4302541.5853710/1‑94 (MQ=60)
                                               CGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGC                                                >  SRR4302541.4749816/1‑94 (MQ=60)
                                                 ATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGG                                              <  SRR4302541.6214734/94‑1 (MQ=60)
                                                 ATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGG                                              <  SRR4302541.1152227/94‑1 (MQ=60)
                                                  TGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGA                                             >  SRR4302541.8445133/1‑94 (MQ=60)
                                                  TGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGA                                             >  SRR4302541.4662960/1‑94 (MQ=60)
                                                   GCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGAC                                            >  SRR4302541.1267812/1‑94 (MQ=60)
                                                   GCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGAC                                            <  SRR4302541.6857376/94‑1 (MQ=60)
                                                   GCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATAAGCGGAC                                            <  SRR4302541.7140688/94‑1 (MQ=60)
                                                    CCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACG                                           >  SRR4302541.661187/1‑94 (MQ=60)
                                                    CCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACG                                           >  SRR4302541.6200253/1‑94 (MQ=60)
                                                    CCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACG                                           >  SRR4302541.985413/1‑94 (MQ=60)
                                                     CATTTATGATGTCATCCGCTTTCCGCCGGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGA                                          <  SRR4302541.6368411/94‑1 (MQ=60)
                                                     CATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGA                                          >  SRR4302541.5090869/1‑94 (MQ=60)
                                                     CATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGA                                          >  SRR4302541.2645776/1‑94 (MQ=60)
                                                      ATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAG                                         >  SRR4302541.8092479/1‑94 (MQ=60)
                                                       TTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGT                                        <  SRR4302541.4779908/94‑1 (MQ=60)
                                                       TTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGG                                        >  SRR4302541.4603815/1‑94 (MQ=60)
                                                        TGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTG                                       <  SRR4302541.924009/94‑1 (MQ=60)
                                                        TGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTG                                       >  SRR4302541.1774946/1‑94 (MQ=60)
                                                        TGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTG                                       >  SRR4302541.3046581/1‑94 (MQ=60)
                                                        TGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTG                                       <  SRR4302541.4574261/94‑1 (MQ=60)
                                                        TGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTG                                       <  SRR4302541.924008/94‑1 (MQ=60)
                                                        TGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTG                                       <  SRR4302541.2282664/94‑1 (MQ=60)
                                                         GATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGGGC                                      >  SRR4302541.1483299/1‑94 (MQ=60)
                                                          ATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCA                                     >  SRR4302541.1990417/1‑94 (MQ=60)
                                                          ATGATCTCATCCGGTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCA                                     <  SRR4302541.6440976/94‑1 (MQ=60)
                                                           TGATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAA                                    <  SRR4302541.4208493/94‑1 (MQ=60)
                                                            GATGTCATCCGTTTTGCGCCTGCTTCTCGACAGGCGCTTCTGTTTTCTGCAACCTGGCCGGAAGCTATCTCTGGAATCAGTGGACGtgtggaag                                   >  SRR4302541.6750842/1‑86 (MQ=60)
                                                            GATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAAC                                   <  SRR4302541.6711041/94‑1 (MQ=60)
                                                             ATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACG                                  <  SRR4302541.4426810/94‑1 (MQ=60)
                                                             ATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACG                                  >  SRR4302541.7821220/1‑94 (MQ=60)
                                                             ATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACG                                  >  SRR4302541.2678592/1‑94 (MQ=60)
                                                             ATGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACG                                  <  SRR4302541.70031/94‑1 (MQ=60)
                                                              TGTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGC                                 <  SRR4302541.2351327/94‑1 (MQ=60)
                                                               GTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCG                                >  SRR4302541.2984537/1‑94 (MQ=60)
                                                               GTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCG                                >  SRR4302541.1845589/1‑94 (MQ=60)
                                                               GTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCG                                >  SRR4302541.6872502/1‑94 (MQ=60)
                                                               GTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCG                                <  SRR4302541.7154200/94‑1 (MQ=60)
                                                               GTCATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCG                                >  SRR4302541.220130/1‑94 (MQ=60)
                                                                 CATCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGAT                              >  SRR4302541.7099135/1‑94 (MQ=60)
                                                                  CTCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATC                             <  SRR4302541.2305304/94‑1 (MQ=60)
                                                                   TCCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCC                            <  SRR4302541.1612077/94‑1 (MQ=60)
                                                                    CCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCT                           <  SRR4302541.8196922/94‑1 (MQ=60)
                                                                    CCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCT                           <  SRR4302541.5777174/94‑1 (MQ=60)
                                                                    CCGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCT                           <  SRR4302541.733451/94‑1 (MQ=60)
                                                                     CGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGTAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGAGCCTT                          >  SRR4302541.6193445/1‑94 (MQ=60)
                                                                     CGTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTT                          >  SRR4302541.6193444/1‑94 (MQ=60)
                                                                      GTTTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTT                         >  SRR4302541.3253744/1‑94 (MQ=60)
                                                                        TTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGG                       <  SRR4302541.1410639/94‑1 (MQ=60)
                                                                        TTTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGG                       >  SRR4302541.6481588/1‑94 (MQ=60)
                                                                         TTGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGC                      >  SRR4302541.7948869/1‑94 (MQ=60)
                                                                          TGCGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCCACGCGATCCTTTGGCG                     >  SRR4302541.2665079/1‑94 (MQ=60)
                                                                            CGCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGAT                   >  SRR4302541.3877476/1‑94 (MQ=60)
                                                                             GCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATT                  <  SRR4302541.8255664/94‑1 (MQ=60)
                                                                             GCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATT                  <  SRR4302541.7529484/94‑1 (MQ=60)
                                                                             GCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATT                  <  SRR4302541.8864851/94‑1 (MQ=60)
                                                                             GCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATT                  >  SRR4302541.6943350/1‑94 (MQ=60)
                                                                             GCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATT                  <  SRR4302541.210511/94‑1 (MQ=60)
                                                                             GCCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATT                  <  SRR4302541.7204491/94‑1 (MQ=60)
                                                                              CCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTG                 >  SRR4302541.1846730/1‑94 (MQ=60)
                                                                              CCTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTG                 <  SRR4302541.8713673/94‑1 (MQ=60)
                                                                               CTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGA                <  SRR4302541.624393/94‑1 (MQ=60)
                                                                               CTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGA                >  SRR4302541.7989627/1‑94 (MQ=60)
                                                                               CTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGA                >  SRR4302541.1637063/1‑94 (MQ=60)
                                                                               CTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGA                >  SRR4302541.5991430/1‑94 (MQ=60)
                                                                               CTGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGA                >  SRR4302541.4622094/1‑94 (MQ=60)
                                                                                TGCATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAA               <  SRR4302541.2498233/94‑1 (MQ=60)
                                                                                  CATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAAT             <  SRR4302541.4217457/94‑1 (MQ=60)
                                                                                  CATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAAT             >  SRR4302541.8292092/1‑94 (MQ=60)
                                                                                   ATCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATT            <  SRR4302541.8224788/94‑1 (MQ=60)
                                                                                    TCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTG           <  SRR4302541.797722/94‑1 (MQ=60)
                                                                                    TCTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTG           <  SRR4302541.775317/94‑1 (MQ=60)
                                                                                     CTCGACAGGTGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGA          <  SRR4302541.7418390/94‑1 (MQ=60)
                                                                                     CTCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGA          >  SRR4302541.4862291/1‑94 (MQ=60)
                                                                                      TCGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGAC         >  SRR4302541.2997504/1‑94 (MQ=60)
                                                                                       CGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACT        >  SRR4302541.6928174/1‑94 (MQ=60)
                                                                                       CGACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGAAT        >  SRR4302541.6113185/1‑94 (MQ=60)
                                                                                        GACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTC       >  SRR4302541.5475007/1‑94 (MQ=60)
                                                                                        GACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTC       >  SRR4302541.7472588/1‑94 (MQ=60)
                                                                                         ACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCA      <  SRR4302541.3321104/94‑1 (MQ=60)
                                                                                         ACAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCA      <  SRR4302541.2138588/94‑1 (MQ=60)
                                                                                          CAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAA     <  SRR4302541.5841886/94‑1 (MQ=60)
                                                                                          CAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAA     >  SRR4302541.2559587/1‑94 (MQ=60)
                                                                                          CAGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAA     >  SRR4302541.6337254/1‑94 (MQ=60)
                                                                                           AGGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAAC    <  SRR4302541.1278771/94‑1 (MQ=60)
                                                                                            GGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACA   <  SRR4302541.2699628/94‑1 (MQ=60)
                                                                                            GGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACA   >  SRR4302541.4663331/1‑94 (MQ=60)
                                                                                            GGCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACA   <  SRR4302541.7728607/94‑1 (MQ=60)
                                                                                             GCGCTTCTGTTTTCGGCACCCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACAG  <  SRR4302541.4220783/94‑1 (MQ=60)
                                                                                             GCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACAG  <  SRR4302541.1185665/94‑1 (MQ=60)
                                                                                             GCGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACAG  <  SRR4302541.7969490/94‑1 (MQ=60)
                                                                                             |                                                                                             
ACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGACGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACAG  >  NC_000913/1407979‑1408165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: