Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,497,509 |
A→G |
L322P (CTG→CCG) |
b1428 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,497,509 | 0 | A | G | 99.6%
| 828.3
/ ‑4.4
| 239 | L322P (CTG→CCG) | b1428 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (136/102); total (136/103) |
| Fisher's exact test for biased strand distribution p-value = 4.31e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.45e-01 |
Only 100 of 248 total aligned reads displayed.
AAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCAGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCG > NC_000913/1497419‑1497598
|
aaGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGgc > 1:3609097/1‑93 (MQ=255)
aGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGgcg < 1:4255401/93‑1 (MQ=255)
ggTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCcggcgg > 1:3487861/1‑93 (MQ=255)
gTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCggcggc > 2:454993/1‑93 (MQ=255)
tGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGt < 1:5707440/93‑1 (MQ=255)
gCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGtt > 2:1401738/1‑93 (MQ=255)
tGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTcgc < 1:4318762/93‑1 (MQ=255)
aaaCAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGt > 2:3401701/1‑93 (MQ=255)
aaaCAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGt < 1:2489269/93‑1 (MQ=255)
aaCAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTa > 2:2762314/1‑93 (MQ=255)
aCAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTaa > 1:3843110/1‑93 (MQ=255)
aGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATg < 1:3688404/93‑1 (MQ=255)
aGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATg > 2:847837/1‑93 (MQ=255)
ggCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATgc < 2:4049807/93‑1 (MQ=255)
ggCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATgc > 2:1794128/1‑93 (MQ=255)
gCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATgcg > 2:5807521/1‑93 (MQ=255)
tGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGct > 1:5953509/1‑93 (MQ=255)
tGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGct > 2:2605987/1‑93 (MQ=255)
tGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGct > 1:4836015/1‑93 (MQ=255)
tGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGct > 1:4494723/1‑93 (MQ=255)
tGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGACGTTCGCGTAATGCGct > 1:5983695/1‑93 (MQ=255)
gAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGctc > 2:6395832/1‑93 (MQ=255)
aGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGctcc < 1:2200177/93‑1 (MQ=255)
gTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGGTCGCGTAATGCGctcct > 2:4430887/1‑93 (MQ=255)
ttCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGctcctc > 2:2999232/1‑93 (MQ=255)
ttCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGctcctc < 1:2055657/93‑1 (MQ=255)
ttCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGctcctc > 2:7261/1‑93 (MQ=255)
tCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGctcctct > 2:3766896/1‑92 (MQ=255)
tCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCg > 1:3935532/1‑93 (MQ=255)
cTGAATGATGCATATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGcc < 1:5411747/93‑1 (MQ=255)
gAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGt < 1:2893570/93‑1 (MQ=255)
gAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGt < 1:2773395/93‑1 (MQ=255)
gAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGt > 2:1615904/1‑93 (MQ=255)
aaTGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGtt < 1:4237932/93‑1 (MQ=255)
aaTGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGtt > 2:2083999/1‑93 (MQ=255)
aaTGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGtt > 2:4749952/1‑93 (MQ=255)
atgatgCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTa > 2:4959880/1‑93 (MQ=255)
atgatgCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTa > 1:3508054/1‑93 (MQ=255)
tgatgCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTaa > 1:872458/1‑93 (MQ=255)
gatgCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAAt > 2:3228184/1‑93 (MQ=255)
gCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGAc > 1:4847799/1‑93 (MQ=255)
cTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACtt > 1:3409936/1‑93 (MQ=255)
tATGATGAGGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACttt < 1:5020066/93‑1 (MQ=255)
tgatgatgTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTg > 2:1989151/1‑93 (MQ=255)
atgTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCa < 2:885060/93‑1 (MQ=255)
atgTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCa > 1:5571260/1‑93 (MQ=255)
tgtgAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAGTGCGCTACTCGCCGTTGATGACTTTTGGACCAc > 2:5662780/1‑93 (MQ=255)
tgtgAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCAc > 2:583097/1‑93 (MQ=255)
tgtgAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCCGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCAc > 1:4551201/1‑93 (MQ=255)
gtgAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACg < 2:227133/93‑1 (MQ=255)
gtgAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACg > 1:5204117/1‑93 (MQ=255)
tgAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACgg < 2:4256315/93‑1 (MQ=255)
gAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGa > 2:5163228/1‑93 (MQ=255)
aaCTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCAAGGAc > 1:5346293/1‑93 (MQ=255)
aCTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACa > 1:4938626/1‑93 (MQ=255)
cTTATACGCGCGTATTATCGATGCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACAt < 2:3394406/93‑1 (MQ=255)
ttATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATg > 1:5143768/1‑93 (MQ=255)
ttATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATg > 1:1927577/1‑93 (MQ=255)
ttATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATg < 1:4214529/93‑1 (MQ=255)
tataCGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGa < 1:3563996/93‑1 (MQ=255)
tataCGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTCGACCACGGACATGa > 2:5729692/1‑93 (MQ=255)
taCGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAAc > 2:2415829/1‑93 (MQ=255)
taCGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAAc > 1:1131371/1‑93 (MQ=255)
taCGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAAc < 1:5629501/93‑1 (MQ=255)
aCGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAAcc < 1:835281/93‑1 (MQ=255)
cgcgTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCgtg > 2:1081698/1‑93 (MQ=255)
gcgTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCgtgt > 1:1270724/1‑93 (MQ=255)
cgTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTc < 2:6338473/93‑1 (MQ=255)
gTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCg > 2:1321796/1‑93 (MQ=255)
gTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCg > 2:5366109/1‑93 (MQ=255)
tgtatCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGcc < 2:292298/91‑1 (MQ=255)
attatCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGcc > 2:3514393/1‑93 (MQ=255)
ttatCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCa > 2:3238464/1‑93 (MQ=255)
ttatCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCa > 1:294099/1‑93 (MQ=255)
tatCGATTCACAATACCCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCAt < 1:1848757/93‑1 (MQ=255)
atCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATc > 2:4359554/1‑93 (MQ=255)
tCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCa > 1:1220862/1‑93 (MQ=255)
gATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCaaa > 1:3289876/1‑93 (MQ=255)
aTTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAg < 2:4508308/93‑1 (MQ=255)
aTTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAg > 2:3530588/1‑93 (MQ=255)
ttCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAgg > 2:6263274/1‑93 (MQ=255)
ttCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAgg < 2:5541002/93‑1 (MQ=255)
tCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGc < 1:558761/93‑1 (MQ=255)
cacaATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCt < 2:5581499/93‑1 (MQ=255)
acaATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCtt > 1:4116951/1‑93 (MQ=255)
caATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTc > 1:3890919/1‑93 (MQ=255)
caATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTc < 1:2712681/93‑1 (MQ=255)
caATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTc < 1:2622190/93‑1 (MQ=255)
aaTAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCa < 1:3071814/93‑1 (MQ=255)
aTAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCaa < 2:6581/93‑1 (MQ=255)
aTAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCaa > 2:591844/1‑93 (MQ=255)
aTAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCaa < 1:700471/93‑1 (MQ=255)
aaCCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAacg > 1:1499983/1‑93 (MQ=255)
aCCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAAGCTTCAacga > 1:979209/1‑93 (MQ=255)
cccTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAacgac < 1:1606257/93‑1 (MQ=255)
ccatGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAacgac < 1:3034382/90‑1 (MQ=255)
ccTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAacgacg > 2:1245085/1‑93 (MQ=255)
cTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACgg > 1:2223923/1‑93 (MQ=255)
cTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACgg < 1:633505/93‑1 (MQ=255)
gCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCg > 1:1000781/1‑93 (MQ=255)
|
AAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCAGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCG > NC_000913/1497419‑1497598
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTGAAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCAGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGTGGT > NC_000913/1497416‑1497602
|
TTGAAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCG < SRR4302534.4325270/94‑1 (MQ=60)
TTGAAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCG > SRR4302534.6397314/1‑94 (MQ=60)
TGAAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGG < SRR4302534.5527762/94‑1 (MQ=60)
GAAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGC > SRR4302534.3706147/1‑94 (MQ=60)
GAAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGC > SRR4302534.4585296/1‑94 (MQ=60)
AAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCG < SRR4302534.5256602/94‑1 (MQ=60)
AAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCG > SRR4302534.2819432/1‑94 (MQ=60)
AAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCG > SRR4302534.5835677/1‑94 (MQ=60)
AAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCG < SRR4302534.2490439/94‑1 (MQ=60)
AGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGG > SRR4302534.3581600/1‑94 (MQ=60)
AGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGG < SRR4302534.4370253/94‑1 (MQ=60)
TGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTT > SRR4302534.2275461/1‑94 (MQ=60)
TGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTT < SRR4302534.5862051/94‑1 (MQ=60)
CTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGC > SRR4302534.222072/1‑94 (MQ=60)
TGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCG < SRR4302534.4435681/94‑1 (MQ=60)
GAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGT < SRR4302534.3848089/94‑1 (MQ=60)
AAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTA < SRR4302534.2555394/94‑1 (MQ=60)
AAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTA > SRR4302534.1121181/1‑94 (MQ=60)
AACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAA < SRR4302534.3078831/94‑1 (MQ=60)
AACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAA > SRR4302534.3132433/1‑94 (MQ=60)
AACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAA > SRR4302534.3946335/1‑94 (MQ=60)
CAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATG > SRR4302534.298383/1‑94 (MQ=60)
CAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATG > SRR4302534.4853028/1‑94 (MQ=60)
AGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGC > SRR4302534.2915526/1‑94 (MQ=60)
AGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGC < SRR4302534.3787573/94‑1 (MQ=60)
GCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGC < SRR4302534.3606135/94‑1 (MQ=60)
CTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCT < SRR4302534.524501/94‑1 (MQ=60)
CTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCT > SRR4302534.4967217/1‑94 (MQ=60)
CTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCT > SRR4302534.4616369/1‑94 (MQ=60)
CTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCT > SRR4302534.6115169/1‑94 (MQ=60)
CTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCT > SRR4302534.3459958/1‑94 (MQ=60)
CTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGACGTTCGCGTAATGCGCT > SRR4302534.6146232/1‑94 (MQ=60)
TGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTC > SRR4302534.3322852/1‑94 (MQ=60)
AGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCT < SRR4302534.2258399/94‑1 (MQ=60)
GTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTC < SRR4302534.652717/94‑1 (MQ=60)
GTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTC < SRR4302534.1196182/94‑1 (MQ=60)
TTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCG < SRR4302534.2109358/94‑1 (MQ=60)
TTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCG > SRR4302534.4040950/1‑94 (MQ=60)
TTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCG < SRR4302534.2777101/94‑1 (MQ=60)
CCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCC < SRR4302534.3547052/94‑1 (MQ=60)
CTGAATGATGCCTATTATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCG < SRR4302534.4361124/94‑1 (MQ=60)
CTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCG < SRR4302534.5748183/94‑1 (MQ=60)
CTGAATGATGCATATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCG < SRR4302534.5557331/94‑1 (MQ=60)
TAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTT < SRR4302534.5949828/94‑1 (MQ=60)
GAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTT < SRR4302534.2846372/94‑1 (MQ=60)
GAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTT < SRR4302534.2969527/94‑1 (MQ=60)
AATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTA < SRR4302534.864586/94‑1 (MQ=60)
AATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTA > SRR4302534.3602426/1‑94 (MQ=60)
AATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTA < SRR4302534.4352184/94‑1 (MQ=60)
ATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAA > SRR4302534.1588608/1‑94 (MQ=60)
ATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAA > SRR4302534.894502/1‑94 (MQ=60)
TGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGAC > SRR4302534.4979319/1‑94 (MQ=60)
CCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTT > SRR4302534.3954793/1‑94 (MQ=60)
CCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTT > SRR4302534.3501524/1‑94 (MQ=60)
CTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTT > SRR4302534.4025556/1‑94 (MQ=60)
TATGATGAGGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTT < SRR4302534.5155695/94‑1 (MQ=60)
ATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTG < SRR4302534.2219932/94‑1 (MQ=60)
ATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTG > SRR4302534.5129339/1‑94 (MQ=60)
TGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGG > SRR4302534.3716612/1‑94 (MQ=60)
GATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGA < SRR4302534.5445192/94‑1 (MQ=60)
TGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACC < SRR4302534.3703757/94‑1 (MQ=60)
GATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCA > SRR4302534.5721706/1‑94 (MQ=60)
ATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCCGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCAC > SRR4302534.4674568/1‑94 (MQ=60)
TGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGGGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACG > SRR4302534.4040316/1‑94 (MQ=60)
TGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACG > SRR4302534.5344521/1‑94 (MQ=60)
TGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGA > SRR4302534.1535056/1‑94 (MQ=60)
TGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGA > SRR4302534.5730092/1‑94 (MQ=60)
GAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGAC > SRR4302534.4216292/1‑94 (MQ=60)
GAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGAC < SRR4302534.3072116/94‑1 (MQ=60)
GAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCAAGGAC > SRR4302534.5490441/1‑94 (MQ=60)
AACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACA > SRR4302534.5072439/1‑94 (MQ=60)
ACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTtgaccccggagaa > SRR4302534.128230/1‑81 (MQ=60)
ACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACAT > SRR4302534.939698/1‑94 (MQ=60)
CTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATG > SRR4302534.5282570/1‑94 (MQ=60)
CTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATG > SRR4302534.1977968/1‑94 (MQ=60)
TTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGA < SRR4302534.4328204/94‑1 (MQ=60)
TTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTCCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGA < SRR4302534.4277448/94‑1 (MQ=60)
TATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAA < SRR4302534.2942586/94‑1 (MQ=60)
TATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAA < SRR4302534.3659868/94‑1 (MQ=60)
ATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAAC > SRR4302534.1160942/1‑94 (MQ=60)
TACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACC < SRR4302534.2758626/94‑1 (MQ=60)
TACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACC < SRR4302534.5781860/94‑1 (MQ=60)
ACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCG < SRR4302534.856310/94‑1 (MQ=60)
GCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTG > SRR4302534.1936739/1‑94 (MQ=60)
CGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGT > SRR4302534.4265363/1‑94 (MQ=60)
CGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGT > SRR4302534.2099051/1‑94 (MQ=60)
CGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGT > SRR4302534.1304192/1‑94 (MQ=60)
GCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTC > SRR4302534.2436393/1‑94 (MQ=60)
CGTATTATCGATTCACAATACCCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCG < SRR4302534.5039616/94‑1 (MQ=60)
CGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCG < SRR4302534.5305462/94‑1 (MQ=60)
CGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCG > SRR4302534.551330/1‑94 (MQ=60)
TATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCC < SRR4302534.3349466/94‑1 (MQ=60)
TATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCC < SRR4302534.258218/94‑1 (MQ=60)
ATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCA > SRR4302534.301704/1‑94 (MQ=60)
TATCGATTCACAATACCCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATC < SRR4302534.1896854/94‑1 (MQ=60)
TATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATC > SRR4302534.4842991/1‑94 (MQ=60)
TATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATC < SRR4302534.723466/94‑1 (MQ=60)
ATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCA > SRR4302534.4661759/1‑94 (MQ=60)
ATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCA > SRR4302534.1252997/1‑94 (MQ=60)
CGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAA > SRR4302534.1020989/1‑94 (MQ=60)
CGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAA > SRR4302534.3377592/1‑94 (MQ=60)
ATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGG > SRR4302534.5457234/1‑94 (MQ=60)
ATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGG < SRR4302534.6436241/94‑1 (MQ=60)
TCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCT < SRR4302534.572535/94‑1 (MQ=60)
TCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCT < SRR4302534.1579628/94‑1 (MQ=60)
CACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTT > SRR4302534.5028800/1‑94 (MQ=60)
CACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTT > SRR4302534.4227722/1‑94 (MQ=60)
ACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTC > SRR4302534.3995371/1‑94 (MQ=60)
CAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCA < SRR4302534.2691568/94‑1 (MQ=60)
CAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCA < SRR4302534.2784301/94‑1 (MQ=60)
AATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAA > SRR4302534.3600135/1‑94 (MQ=60)
AATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAA < SRR4302534.3152515/94‑1 (MQ=60)
AATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAA > SRR4302534.4359265/1‑94 (MQ=60)
ATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAAC < SRR4302534.717634/94‑1 (MQ=60)
ATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAAC < SRR4302534.374954/94‑1 (MQ=60)
ATAACCCTGCCGGCGGCGTGCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGTCTTCAAC < SRR4302534.4432068/94‑1 (MQ=60)
TAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACG > SRR4302534.1539454/1‑94 (MQ=60)
TAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACG < SRR4302534.1696287/94‑1 (MQ=60)
TAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACG < SRR4302534.6352138/94‑1 (MQ=60)
TAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACG > SRR4302534.1291199/1‑94 (MQ=60)
AACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAAGCTTCAACGA > SRR4302534.1004200/1‑94 (MQ=60)
CCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACG < SRR4302534.1648208/94‑1 (MQ=60)
CCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACG < SRR4302534.5653247/94‑1 (MQ=60)
CCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACG < SRR4302534.6122459/94‑1 (MQ=60)
CCATGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACG < SRR4302534.3113953/94‑1 (MQ=60)
CCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGG > SRR4302534.2282818/1‑94 (MQ=60)
CCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGG < SRR4302534.1914645/94‑1 (MQ=60)
CCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGG > SRR4302534.5695110/1‑94 (MQ=60)
CCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGG < SRR4302534.3572731/94‑1 (MQ=60)
CCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGG > SRR4302534.4332291/1‑94 (MQ=60)
CCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGG > SRR4302534.4541469/1‑94 (MQ=60)
CCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGG > SRR4302534.878882/1‑94 (MQ=60)
CCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGG > SRR4302534.4976743/1‑94 (MQ=60)
CTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGG > SRR4302534.5740704/1‑94 (MQ=60)
CTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGC < SRR4302534.5865777/94‑1 (MQ=60)
CTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGC < SRR4302534.648878/94‑1 (MQ=60)
CTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGC < SRR4302534.3654209/94‑1 (MQ=60)
TGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCG > SRR4302534.1026428/1‑94 (MQ=60)
CCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGCGTCGCCATCAAAGGCTTCAACGACGGCGTG < SRR4302534.3053028/94‑1 (MQ=60)
CGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGTGG > SRR4302534.2786639/1‑94 (MQ=60)
GGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGTGGT > SRR4302534.4431719/1‑94 (MQ=60)
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TTGAAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCAGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCGTGGT > NC_000913/1497416‑1497602
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
