Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,607,710 |
A→G |
L332P (CTT→CCT) |
uxaB ← |
altronate oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,607,710 | 0 | A | G | 100.0%
| 869.7
/ NA
| 248 | L332P (CTT→CCT) | uxaB | altronate oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (123/125); total (123/125) |
Only 100 of 252 total aligned reads displayed.
TTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAAGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTA > NC_000913/1607620‑1607799
|
gAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCaa > 1:1291092/1‑93 (MQ=255)
gAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCaa < 1:4078645/93‑1 (MQ=255)
gAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCaa > 1:2880406/1‑93 (MQ=255)
gAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCaa > 2:5761490/1‑93 (MQ=255)
aGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCaaa < 1:5383566/93‑1 (MQ=255)
gcgcGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAAt > 2:659677/1‑93 (MQ=255)
gcgcGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAAt > 1:6187595/1‑93 (MQ=255)
cgcgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATc < 1:1550889/93‑1 (MQ=255)
cgcgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATc < 1:1700370/93‑1 (MQ=255)
gcgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATcc > 2:4158532/1‑93 (MQ=255)
cgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCa > 1:2456201/1‑93 (MQ=255)
cgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCa < 2:4608141/93‑1 (MQ=255)
gATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAGAGATTCCAGTTCATCACGAGGCAAATCCAg < 1:954161/93‑1 (MQ=255)
gATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACGGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAg < 1:716648/93‑1 (MQ=255)
aTAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGt > 2:5332321/1‑93 (MQ=255)
tAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTa > 2:336887/1‑93 (MQ=255)
aGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTAc > 1:46692/1‑93 (MQ=255)
aCAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCg > 1:1049970/1‑93 (MQ=255)
aCAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCg > 2:2682288/1‑93 (MQ=255)
agcagcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGa > 2:2350070/1‑93 (MQ=255)
gcagcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaa < 1:3189332/93‑1 (MQ=255)
gcagcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaa < 2:5487660/93‑1 (MQ=255)
cagcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaat < 2:6246343/93‑1 (MQ=255)
agcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaata > 1:1137369/1‑93 (MQ=255)
agcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaata > 2:4180312/1‑93 (MQ=255)
agcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATACAGTACCGGaata > 1:5094845/1‑93 (MQ=255)
tGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAAtt > 1:5135757/1‑93 (MQ=255)
gATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAAttt > 1:5498073/1‑93 (MQ=255)
aTGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATttc < 2:4366989/93‑1 (MQ=255)
tGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATttct < 2:310136/93‑1 (MQ=255)
cTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATttcttc < 2:5030880/93‑1 (MQ=255)
cTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATttcttc > 1:5430621/1‑93 (MQ=255)
ttAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCg < 1:3763478/93‑1 (MQ=255)
tAATGTACGGGTTACGGAAACGCACGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTCCCGGAATAATTTCTTCGt < 1:4911266/93‑1 (MQ=255)
aaTGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTa < 1:1993715/93‑1 (MQ=255)
aTGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAg < 2:4057451/93‑1 (MQ=255)
tgtgCGGGTTACGGAAACGCCCGAGGACTGCCCTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCGAGTACCGGAATAATTTCTTCGgaga < 1:4733316/93‑1 (MQ=255)
tGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGa > 1:3829377/1‑93 (MQ=255)
gTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGAt > 1:4864789/1‑93 (MQ=255)
tACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATa > 1:1557538/1‑93 (MQ=255)
tACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATa < 1:3067700/93‑1 (MQ=255)
cGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGc > 1:2573650/1‑93 (MQ=255)
gggTTACGGAAACGGCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCt < 2:1752569/93‑1 (MQ=255)
gggTTACGGAAACGCCCGGTGACTGCACTTGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGGATAATTTCTTCGTAGATAGCt > 1:5591942/1‑93 (MQ=255)
gggTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCt < 2:3748229/93‑1 (MQ=255)
ggTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCtt > 2:4649294/1‑93 (MQ=255)
gTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCttt > 1:4351958/1‑93 (MQ=255)
ttACGGAAACGCCCGGTGACTGCACTGTCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCtttt < 2:1059218/93‑1 (MQ=255)
ttACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCtttt < 1:3076235/93‑1 (MQ=255)
aCGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTc > 1:814732/1‑93 (MQ=255)
ggAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCaa > 1:3536977/1‑93 (MQ=255)
ggAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCaa > 2:2525660/1‑93 (MQ=255)
ggAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCaa > 1:338693/1‑93 (MQ=255)
ggAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCaa < 1:5443055/93‑1 (MQ=255)
ggAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCaa < 1:3609009/93‑1 (MQ=255)
gAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAAc < 1:906146/93‑1 (MQ=255)
gAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAAc < 2:3323960/93‑1 (MQ=255)
gAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAAc > 2:559699/1‑93 (MQ=255)
gAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAAc > 2:1528634/1‑93 (MQ=255)
aaaCGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAATTCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACg < 2:4537807/93‑1 (MQ=255)
aaaCGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACg > 2:5851156/1‑93 (MQ=255)
aaCGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGa > 1:6007557/1‑93 (MQ=255)
aCGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGaa > 1:2544054/1‑93 (MQ=255)
aCGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGaa < 2:6410335/93‑1 (MQ=255)
aCGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGaa > 1:13747/1‑93 (MQ=255)
aCGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGaa > 2:5713477/1‑93 (MQ=255)
cGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAAt < 1:1090611/93‑1 (MQ=255)
cGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAAt < 1:451073/93‑1 (MQ=255)
cGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAAt < 2:3808608/93‑1 (MQ=255)
cccGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATgc > 1:4333800/1‑93 (MQ=255)
cGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATgcgc > 2:2058240/1‑93 (MQ=255)
gTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCaa > 2:5076435/1‑93 (MQ=255)
tgccTGCACCCGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGTAATAATTTCTTCTTATATTGCTTTTTCAACGAATGCGCaaa < 1:2776545/90‑1 (MQ=255)
tGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCaaa < 2:5219876/93‑1 (MQ=255)
agtGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAAtt > 1:4054643/3‑93 (MQ=255)
tGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTc < 1:2234533/93‑1 (MQ=255)
tGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTc > 2:6092607/1‑93 (MQ=255)
tGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTc > 2:6344267/1‑93 (MQ=255)
tGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTc < 2:1583718/93‑1 (MQ=255)
cACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAg < 1:19363/93‑1 (MQ=255)
ggCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATc < 1:2853500/93‑1 (MQ=255)
cGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGt < 2:1832551/93‑1 (MQ=255)
gAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCCGCATCGtt < 1:6304222/93‑1 (MQ=255)
aaaGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTc < 2:1321773/93‑1 (MQ=255)
aaGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCa > 2:1224656/1‑93 (MQ=255)
aaGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCa > 1:5810659/1‑93 (MQ=255)
gATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATc > 1:341781/1‑93 (MQ=255)
gATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATc > 1:5329941/1‑93 (MQ=255)
ttCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGc > 2:1928822/1‑93 (MQ=255)
tCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCt < 1:249182/93‑1 (MQ=255)
tCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCt < 2:5997723/93‑1 (MQ=255)
ccAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCtt > 1:4549301/1‑93 (MQ=255)
aGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCa > 1:2254938/1‑93 (MQ=255)
aGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCa > 1:2729889/1‑93 (MQ=255)
aGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGAGCAAATTTCAGCATCGTTCATCGCTTCa > 2:6211758/1‑93 (MQ=255)
catcaCTAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTa < 2:5900845/93‑1 (MQ=255)
atcaCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTAc > 2:3082466/1‑93 (MQ=255)
caCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACgg < 1:1608464/93‑1 (MQ=255)
aCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCCCCTACGGt < 2:2245141/93‑1 (MQ=255)
cGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTa > 1:1419008/1‑93 (MQ=255)
|
TTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAAGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTA > NC_000913/1607620‑1607799
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAAGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCA > NC_000913/1607617‑1607803
|
ccntgnannnnGATAGACAGCNGNNNNTNNTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCNTCACGAG < SRR4302534.1329662/83‑1 (MQ=60)
CCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAG < SRR4302534.4870549/94‑1 (MQ=60)
CCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAG > SRR4302534.6166162/1‑94 (MQ=60)
GTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGC > SRR4302534.2304646/1‑94 (MQ=60)
TTGAGCGCGATAGACAGCATCTGATGCTTAATGTGCGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCA < SRR4302534.3293922/94‑1 (MQ=60)
TGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAA > SRR4302534.1325086/1‑94 (MQ=60)
TGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAA > SRR4302534.2956004/1‑94 (MQ=60)
GAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAA < SRR4302534.4188116/94‑1 (MQ=60)
GAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAA < SRR4302534.823053/94‑1 (MQ=60)
AGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAAT < SRR4302534.5528580/94‑1 (MQ=60)
AGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAAT > SRR4302534.6355997/1‑94 (MQ=60)
CGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCC > SRR4302534.3776219/1‑94 (MQ=60)
CGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCC > SRR4302534.4224422/1‑94 (MQ=60)
CGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCC < SRR4302534.1744549/94‑1 (MQ=60)
CGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCC < SRR4302534.1471377/94‑1 (MQ=60)
CGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCC < SRR4302534.1591523/94‑1 (MQ=60)
GCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCA > SRR4302534.2521458/1‑94 (MQ=60)
CGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAG > SRR4302534.3256046/1‑94 (MQ=60)
CGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAG < SRR4302534.933436/94‑1 (MQ=60)
CGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAG < SRR4302534.432648/94‑1 (MQ=60)
CGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAG > SRR4302534.3139705/1‑94 (MQ=60)
CGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAG > SRR4302534.69747/1‑94 (MQ=60)
CGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAG > SRR4302534.2142404/1‑94 (MQ=60)
CGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAG < SRR4302534.277917/94‑1 (MQ=60)
GATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAGAGATTCCAGTTCATCACGAGGCAAATCCAGT < SRR4302534.978456/94‑1 (MQ=60)
GATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGTCAACTCCAGT > SRR4302534.5897240/1‑94 (MQ=60)
GATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACGGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGT < SRR4302534.734306/94‑1 (MQ=60)
ATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTA > SRR4302534.170437/1‑94 (MQ=60)
ATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTA > SRR4302534.2837627/1‑94 (MQ=60)
TAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTAC > SRR4302534.47941/1‑94 (MQ=60)
AGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACC > SRR4302534.5334175/1‑94 (MQ=60)
GACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCG > SRR4302534.1077159/1‑94 (MQ=60)
GACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCG < SRR4302534.316394/94‑1 (MQ=60)
AGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAA < SRR4302534.530921/94‑1 (MQ=60)
GCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAAT > SRR4302534.5646910/1‑94 (MQ=60)
GCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAAT < SRR4302534.2884084/94‑1 (MQ=60)
GCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAAT > SRR4302534.3995846/1‑94 (MQ=60)
GCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAAT < SRR4302534.3273751/94‑1 (MQ=60)
CAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATA > SRR4302534.1167108/1‑94 (MQ=60)
CAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATA < SRR4302534.3506734/94‑1 (MQ=60)
CAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATACAGTACCGGAATA > SRR4302534.5232369/1‑94 (MQ=60)
AGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAA > SRR4302534.2063087/1‑94 (MQ=60)
AGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAA > SRR4302534.641245/1‑94 (MQ=60)
AGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAA > SRR4302534.5240096/1‑94 (MQ=60)
AGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAA < SRR4302534.3638732/94‑1 (MQ=60)
CTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATT > SRR4302534.3603746/1‑94 (MQ=60)
CTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATT > SRR4302534.5274390/1‑94 (MQ=60)
TGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTT > SRR4302534.4539786/1‑94 (MQ=60)
TGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTT > SRR4302534.5646333/1‑94 (MQ=60)
TGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTT < SRR4302534.1629295/94‑1 (MQ=60)
ATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCT < SRR4302534.1780349/94‑1 (MQ=60)
TGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTT < SRR4302534.6029617/94‑1 (MQ=60)
GCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTC < SRR4302534.2618945/94‑1 (MQ=60)
GCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTC > SRR4302534.5576806/1‑94 (MQ=60)
TTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGT < SRR4302534.3864514/94‑1 (MQ=60)
TTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGT < SRR4302534.3152551/94‑1 (MQ=60)
TAATGTACGGGTTACGGAAACGCACGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTCCCGGAATAATTTCTTCGTA < SRR4302534.5044373/94‑1 (MQ=60)
AATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAG < SRR4302534.2045937/94‑1 (MQ=60)
AATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAG > SRR4302534.4844249/1‑94 (MQ=60)
AATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAG < SRR4302534.288000/94‑1 (MQ=60)
AATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAG < SRR4302534.4655672/94‑1 (MQ=60)
ATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGA > SRR4302534.3932226/1‑94 (MQ=60)
TGTGCGGGTTACGGAAACGCCCGAGGACTGCCCTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCGAGTACCGGAATAATTTCTTCGgagag < SRR4302534.4861846/94‑6 (MQ=60)
TGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGAT > SRR4302534.4996753/1‑94 (MQ=60)
GTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATA < SRR4302534.2410775/94‑1 (MQ=60)
GTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATA < SRR4302534.5612735/94‑1 (MQ=60)
GTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATA > SRR4302534.1598314/1‑94 (MQ=60)
GTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATA < SRR4302534.487653/94‑1 (MQ=60)
TACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAG < SRR4302534.5164494/94‑1 (MQ=60)
TACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAG < SRR4302534.3023875/94‑1 (MQ=60)
TACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAG < SRR4302534.3148269/94‑1 (MQ=60)
ACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGC > SRR4302534.2641833/1‑94 (MQ=60)
CGGGTTACGGAAACGCCCGGTGACTGCACTTGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGGATAATTTCTTCGTAGATAGCT > SRR4302534.5743120/1‑94 (MQ=60)
CGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCT > SRR4302534.1512763/1‑94 (MQ=60)
CGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCT < SRR4302534.1390926/94‑1 (MQ=60)
GGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTT < SRR4302534.2547744/94‑1 (MQ=60)
GGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTT > SRR4302534.4469434/1‑94 (MQ=60)
GGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTT > SRR4302534.944029/1‑94 (MQ=60)
TTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTT < SRR4302534.1095117/94‑1 (MQ=60)
TTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTT < SRR4302534.3157046/94‑1 (MQ=60)
TACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTC > SRR4302534.5910554/1‑94 (MQ=60)
TACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTC > SRR4302534.835207/1‑94 (MQ=60)
TACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTC > SRR4302534.5981725/1‑94 (MQ=60)
ACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCA < SRR4302534.1143069/94‑1 (MQ=60)
CGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAA > SRR4302534.3632119/1‑94 (MQ=60)
CGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAA > SRR4302534.347360/1‑94 (MQ=60)
GGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAAC < SRR4302534.5589678/94‑1 (MQ=60)
GGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAAC < SRR4302534.3706056/94‑1 (MQ=60)
GAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACG < SRR4302534.929169/94‑1 (MQ=60)
GAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACG < SRR4302534.5596488/94‑1 (MQ=60)
AAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGA > SRR4302534.6170774/1‑94 (MQ=60)
AACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAA > SRR4302534.2611526/1‑94 (MQ=60)
AACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAA < SRR4302534.1633582/94‑1 (MQ=60)
AACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAA > SRR4302534.14111/1‑94 (MQ=60)
AACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAA > SRR4302534.268375/1‑94 (MQ=60)
ACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAAT > SRR4302534.491859/1‑94 (MQ=60)
ACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAAT < SRR4302534.328927/94‑1 (MQ=60)
CGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATG < SRR4302534.1118984/94‑1 (MQ=60)
CGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATG > SRR4302534.6377525/1‑94 (MQ=60)
CGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATG < SRR4302534.462499/94‑1 (MQ=60)
CGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATG < SRR4302534.1202310/94‑1 (MQ=60)
GCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGC > SRR4302534.4450967/1‑94 (MQ=60)
GCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGC < SRR4302534.2570826/94‑1 (MQ=60)
CCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCG < SRR4302534.4456574/94‑1 (MQ=60)
CCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGA > SRR4302534.5544073/1‑94 (MQ=60)
CGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCA < SRR4302534.4102299/94‑1 (MQ=60)
TGCCTGCACCCGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGTAATAATTTCTTCTTATATTGCTTTTTCAACGAATGCGCAAAT < SRR4302534.2849590/94‑1 (MQ=60)
TGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAAT > SRR4302534.5520706/1‑94 (MQ=60)
GAGTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATT > SRR4302534.4163392/1‑94 (MQ=60)
ACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTT > SRR4302534.6243174/1‑94 (MQ=60)
ACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTT < SRR4302534.3534169/94‑1 (MQ=60)
TGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCA < SRR4302534.1904485/94‑1 (MQ=60)
TGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCA < SRR4302534.2293733/94‑1 (MQ=60)
GCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAG > SRR4302534.2375208/1‑94 (MQ=60)
CACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGC < SRR4302534.19873/94‑1 (MQ=60)
ACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCA < SRR4302534.3854774/94‑1 (MQ=60)
ACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCA < SRR4302534.5562685/94‑1 (MQ=60)
ACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCA > SRR4302534.1357203/1‑94 (MQ=60)
ACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTGCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCA < SRR4302534.774619/94‑1 (MQ=60)
cgaagaaattATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCAT > SRR4302534.3134508/11‑94 (MQ=60)
GGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCG < SRR4302534.2928456/94‑1 (MQ=60)
GGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCG > SRR4302534.5090934/1‑94 (MQ=60)
CGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTT < SRR4302534.3864636/94‑1 (MQ=60)
CGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTT < SRR4302534.5578925/94‑1 (MQ=60)
GAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCCGCATCGTTC < SRR4302534.6474702/94‑1 (MQ=60)
AAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCA < SRR4302534.2009420/94‑1 (MQ=60)
AAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCA > SRR4302534.4684467/1‑94 (MQ=60)
AAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCA > SRR4302534.5968365/1‑94 (MQ=60)
AAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCAT < SRR4302534.1136962/94‑1 (MQ=60)
AGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATC > SRR4302534.350521/1‑94 (MQ=60)
AGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATC > SRR4302534.5473684/1‑94 (MQ=60)
GATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCG > SRR4302534.2939337/1‑94 (MQ=60)
TTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCT > SRR4302534.2570429/1‑94 (MQ=60)
TCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTT < SRR4302534.255680/94‑1 (MQ=60)
TCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTT > SRR4302534.4672632/1‑94 (MQ=60)
CAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCA < SRR4302534.4713148/94‑1 (MQ=60)
CAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCA > SRR4302534.2314711/1‑94 (MQ=60)
CAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCA > SRR4302534.2801872/1‑94 (MQ=60)
CAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCA < SRR4302534.890738/94‑1 (MQ=60)
TTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCT < SRR4302534.4564377/94‑1 (MQ=60)
TCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTA > SRR4302534.500524/1‑94 (MQ=60)
CACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGT < SRR4302534.1650459/94‑1 (MQ=60)
ACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTA > SRR4302534.1456345/1‑94 (MQ=60)
ACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTA < SRR4302534.1437099/94‑1 (MQ=60)
CGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTAT < SRR4302534.1596400/94‑1 (MQ=60)
CGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTAT < SRR4302534.417332/94‑1 (MQ=60)
GAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATC < SRR4302534.4576449/94‑1 (MQ=60)
GAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATC > SRR4302534.1729748/1‑94 (MQ=60)
AGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCC > SRR4302534.3767114/1‑94 (MQ=60)
GGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCA < SRR4302534.3172162/94‑1 (MQ=60)
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CCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAAGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCA > NC_000913/1607617‑1607803
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
