Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,608,034 A→G V224A (GTG→GCG)  uxaB ← altronate oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,608,0340AG99.7% 1148.0 / ‑4.9 330V224A (GTG→GCG) uxaBaltronate oxidoreductase
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (165/164);  total (166/164)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.55e-01

Only 100 of 337 total aligned reads displayed.

GATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCT  >  NC_000913/1607944‑1608123
                                                                                          |                                                                                         
 aTTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCtt                                                                                        >  2:6155844/1‑93 (MQ=255)
   ttCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCa                                                                                      <  1:3851720/93‑1 (MQ=255)
    tCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCAt                                                                                     <  2:2787564/93‑1 (MQ=255)
       gTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATcgc                                                                                  <  1:8677746/93‑1 (MQ=255)
       gTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATcgc                                                                                  >  1:4717674/1‑93 (MQ=255)
        tCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATcgcg                                                                                 >  2:8254682/1‑93 (MQ=255)
        tCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATcgcg                                                                                 >  2:2916511/1‑93 (MQ=255)
         cccTGAATCACAAACAGGTAAAAGTGTTCAGCCGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATcgcgc                                                                                >  2:1375727/1‑93 (MQ=255)
          ccTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATcgcgcg                                                                               <  2:5173609/93‑1 (MQ=255)
          ccTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATcgcgcg                                                                               >  1:3364001/1‑93 (MQ=255)
                   caAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCgg                                                                      >  2:2381072/1‑93 (MQ=255)
                    aaaCAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGt                                                                     >  2:4362055/1‑93 (MQ=255)
                     aaCAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTa                                                                    >  2:3985575/1‑93 (MQ=255)
                       cAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAAc                                                                  <  2:1962582/93‑1 (MQ=255)
                       cAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAAc                                                                  >  1:2632682/1‑93 (MQ=255)
                         ggTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGa                                                                <  1:7892527/93‑1 (MQ=255)
                         ggTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGa                                                                <  2:4031868/93‑1 (MQ=255)
                         ggTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGa                                                                <  2:7559716/93‑1 (MQ=255)
                           tAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATa                                                              <  2:7380256/93‑1 (MQ=255)
                           tAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATa                                                              <  2:4581830/93‑1 (MQ=255)
                           tAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATa                                                              <  2:6078276/93‑1 (MQ=255)
                            aaaaGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATAc                                                             <  2:1164296/93‑1 (MQ=255)
                             aaaGTGTTCAGCGTTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACg                                                            <  1:5715775/93‑1 (MQ=255)
                             aaaGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACg                                                            <  1:2477370/93‑1 (MQ=255)
                              aaGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACgg                                                           <  1:8364960/93‑1 (MQ=255)
                               aGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGt                                                          >  1:3794604/1‑93 (MQ=255)
                               aGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGt                                                          <  2:8075245/93‑1 (MQ=255)
                                gtgtTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTc                                                         <  1:2362630/93‑1 (MQ=255)
                                gtgtTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTc                                                         >  1:2129053/1‑93 (MQ=255)
                                 tgtTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTcc                                                        >  2:709806/1‑93 (MQ=255)
                                 tgtTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTcc                                                        <  2:5961585/93‑1 (MQ=255)
                                 ggtTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTcc                                                        <  1:2984707/92‑1 (MQ=255)
                                  gtTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTccc                                                       >  1:4496088/1‑92 (MQ=255)
                                   ttCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTccac                                                      <  1:4296519/93‑1 (MQ=255)
                                    tCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGGccccc                                                     >  2:4484343/1‑93 (MQ=255)
                                     cAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATCACCGGTAACGATACGGTccacca                                                    >  2:5664466/1‑93 (MQ=255)
                                     cAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTccacca                                                    <  2:2629815/93‑1 (MQ=255)
                                      aGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAg                                                   >  2:4629077/1‑93 (MQ=255)
                                       gCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGc                                                  >  2:6580754/1‑93 (MQ=255)
                                        cGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCg                                                 <  2:1552593/93‑1 (MQ=255)
                                         ggTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGt                                                >  2:3535319/1‑93 (MQ=255)
                                         ggTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGt                                                <  1:5300092/93‑1 (MQ=255)
                                         ggTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGt                                                >  2:8621385/1‑93 (MQ=255)
                                          gtgtCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTa                                               <  2:4745374/93‑1 (MQ=255)
                                          gtgtCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTa                                               <  1:1571456/93‑1 (MQ=255)
                                           tgtCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAg                                              >  1:8119862/1‑93 (MQ=255)
                                            gtCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGa                                             >  1:5024946/1‑93 (MQ=255)
                                             tCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGaa                                            >  1:7373099/1‑93 (MQ=255)
                                                agaAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGCACAg                                         >  1:5617248/1‑93 (MQ=255)
                                                agaAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAg                                         <  2:2470995/93‑1 (MQ=255)
                                                agaAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAg                                         >  1:3307315/1‑93 (MQ=255)
                                                  aaaaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGaa                                       <  1:82229/93‑1 (MQ=255)
                                                  aaaaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGaa                                       <  2:7032884/93‑1 (MQ=255)
                                                  aaaaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGAGTAGAACAGaa                                       >  1:1791871/1‑93 (MQ=255)
                                                    aaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGACCAGAAGc                                     >  1:1218004/1‑93 (MQ=255)
                                                    aaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGc                                     <  2:1138779/93‑1 (MQ=255)
                                                    aaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGc                                     <  2:1078673/93‑1 (MQ=255)
                                                    aaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGc                                     >  1:934750/1‑93 (MQ=255)
                                                    aaCCATCGTGATAACCCAGTGCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGc                                     <  2:3382783/93‑1 (MQ=255)
                                                     aCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCt                                    <  1:5949263/93‑1 (MQ=255)
                                                       cATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGt                                  >  1:3465879/1‑93 (MQ=255)
                                                       cATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGt                                  <  1:5200784/93‑1 (MQ=255)
                                                       cATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGt                                  <  2:2692981/93‑1 (MQ=255)
                                                        aTCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGtt                                 >  1:2785865/1‑93 (MQ=255)
                                                        aTCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGtt                                 >  1:3932513/1‑93 (MQ=255)
                                                         tCGTGATAAGACAGTACTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTa                                <  2:6338367/93‑1 (MQ=255)
                                                         tCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTa                                >  1:1301266/1‑93 (MQ=255)
                                                         tCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTa                                <  1:1447879/93‑1 (MQ=255)
                                                         tCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTa                                <  2:3856568/93‑1 (MQ=255)
                                                         tCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTa                                >  1:7529655/1‑93 (MQ=255)
                                                           gTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGc                              <  1:7093950/93‑1 (MQ=255)
                                                           gTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCATAGAACAGAAGCTGTTAGc                              >  1:3137652/1‑93 (MQ=255)
                                                            tGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGcc                             >  2:880608/1‑93 (MQ=255)
                                                            tGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGcc                             >  1:4103028/1‑93 (MQ=255)
                                                             gATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCt                            <  2:2036711/93‑1 (MQ=255)
                                                               tAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGa                          >  1:3643924/1‑93 (MQ=255)
                                                                aaCCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGAt                         <  1:6346388/93‑1 (MQ=255)
                                                                 aCCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATc                        >  2:8752413/1‑93 (MQ=255)
                                                                     aGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGc                    >  2:6658903/1‑93 (MQ=255)
                                                                        tcttcttcCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCAt                 <  1:537906/93‑1 (MQ=255)
                                                                          ttcttcCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTg               >  2:4146719/1‑93 (MQ=255)
                                                                          ttcttcCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTg               >  2:4901787/1‑93 (MQ=255)
                                                                           tcttcCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGa              <  2:1794569/93‑1 (MQ=255)
                                                                            cttcCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGaa             >  2:5055814/1‑93 (MQ=255)
                                                                             ttcCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAAt            <  2:3320518/93‑1 (MQ=255)
                                                                             ttcCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAAt            >  1:389001/1‑93 (MQ=255)
                                                                              tcCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAATGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATa           >  1:1085817/1‑93 (MQ=255)
                                                                              tcCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATa           >  1:8723114/1‑93 (MQ=255)
                                                                               ccAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAATAGAAGCTGTTAGCCTGATCCAGCCATTGAATaa          >  1:8471324/1‑93 (MQ=255)
                                                                                 aGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAAt        >  1:7825/1‑93 (MQ=255)
                                                                                 aGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAAt        <  2:3029795/93‑1 (MQ=255)
                                                                                 aGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAAt        <  2:2533015/93‑1 (MQ=255)
                                                                                  gTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATg       <  2:8477353/93‑1 (MQ=255)
                                                                                   tttAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGc      <  1:6537105/93‑1 (MQ=255)
                                                                                   tttAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGc      <  1:2024175/93‑1 (MQ=255)
                                                                                     tAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCtt    >  2:5381218/1‑93 (MQ=255)
                                                                                      aGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTc   >  2:6435380/1‑93 (MQ=255)
                                                                                      aGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTc   >  1:6861112/1‑93 (MQ=255)
                                                                                       gCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCt  <  1:6266135/93‑1 (MQ=255)
                                                                                       gCCGCTTAATCGCGCGGATAACCGGTAAAGATACGGTCCACGAGCGTAGAACAGAAGCTGCTAGCCTGATCCAGCCATTGAATAAATGCTTCt  >  2:7878638/1‑93 (MQ=255)
                                                                                          |                                                                                         
GATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCT  >  NC_000913/1607944‑1608123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AAGGATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGC  >  NC_000913/1607941‑1608126
                                                                                             |                                                                                            
AAGGATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCG                                                                                              >  SRR4302541.5260696/1‑94 (MQ=60)
  GGATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAGCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCT                                                                                            <  SRR4302541.5823032/94‑1 (MQ=60)
  GGATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCT                                                                                            <  SRR4302541.449905/94‑1 (MQ=60)
   GATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTT                                                                                           >  SRR4302541.5759543/1‑94 (MQ=60)
    ATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTC                                                                                          >  SRR4302541.4381872/1‑94 (MQ=60)
      TTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCAT                                                                                        <  SRR4302541.387994/94‑1 (MQ=60)
      TTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCAT                                                                                        <  SRR4302541.3890488/94‑1 (MQ=60)
       TCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATC                                                                                       <  SRR4302541.8652509/94‑1 (MQ=60)
       TCGGTACCTGAATCACAAACAAGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATC                                                                                       <  SRR4302541.4530300/94‑1 (MQ=60)
        CGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCG                                                                                      <  SRR4302541.7201954/94‑1 (MQ=60)
         GGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGC                                                                                     <  SRR4302541.3117582/94‑1 (MQ=60)
         GGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGC                                                                                     >  SRR4302541.4765774/1‑94 (MQ=60)
         GGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGC                                                                                     >  SRR4302541.4765775/1‑94 (MQ=60)
         GGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGC                                                                                     >  SRR4302541.1405841/1‑94 (MQ=60)
          GTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCG                                                                                    <  SRR4302541.7752934/94‑1 (MQ=60)
          GTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCG                                                                                    <  SRR4302541.8557518/94‑1 (MQ=60)
          GTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCG                                                                                    <  SRR4302541.8770598/94‑1 (MQ=60)
          GTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCG                                                                                    >  SRR4302541.979225/1‑94 (MQ=60)
          GTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGGGTCGCGAAAACAATCGTGATAAACCAGTTATTCTGCCAGTTTAGACGCTTCATCGCG                                                                                    >  SRR4302541.5438963/1‑94 (MQ=60)
           TCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCTTGATAACCCAGTTCTTCTTCTAGTTTAGCCGCTTCATCGCGC                                                                                   >  SRR4302541.6442592/1‑94 (MQ=60)
           TCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGC                                                                                   >  SRR4302541.6442593/1‑94 (MQ=60)
           TCCCTGAATCACAAACAGGTAAAAGGGTTCAGCGGGGTCGAGAGAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTCCACCGCGC                                                                                   >  SRR4302541.3286466/1‑94 (MQ=60)
            CCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCG                                                                                  <  SRR4302541.1234663/94‑1 (MQ=60)
            CCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCG                                                                                  >  SRR4302541.3397563/1‑94 (MQ=60)
            CCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCG                                                                                  >  SRR4302541.922274/1‑94 (MQ=60)
               TGAATCACAAGCAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGAT                                                                               <  SRR4302541.5195327/94‑1 (MQ=60)
               TGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGAT                                                                               >  SRR4302541.5480636/1‑94 (MQ=60)
               TGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGAT                                                                               >  SRR4302541.3443392/1‑94 (MQ=60)
                GAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATA                                                                              <  SRR4302541.3806224/94‑1 (MQ=60)
                 AATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAA                                                                             >  SRR4302541.1362495/1‑94 (MQ=60)
                    CACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCG                                                                          <  SRR4302541.5618659/94‑1 (MQ=60)
                      CAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGT                                                                        >  SRR4302541.210543/1‑94 (MQ=60)
                       AAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTA                                                                       >  SRR4302541.316288/1‑94 (MQ=60)
                       AAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTA                                                                       >  SRR4302541.2708460/1‑94 (MQ=60)
                       AAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTA                                                                       >  SRR4302541.6312431/1‑94 (MQ=60)
                       AAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTA                                                                       >  SRR4302541.2072286/1‑94 (MQ=60)
                       AAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGGA                                                                       >  SRR4302541.855579/1‑94 (MQ=60)
                        AACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAA                                                                      <  SRR4302541.4067840/94‑1 (MQ=60)
                         ACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAAC                                                                     <  SRR4302541.3945341/94‑1 (MQ=60)
                         ACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAAC                                                                     <  SRR4302541.1292475/94‑1 (MQ=60)
                         ACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAAC                                                                     >  SRR4302541.7567777/1‑94 (MQ=60)
                         ACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAAC                                                                     >  SRR4302541.2658936/1‑94 (MQ=60)
                          CAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACG                                                                    >  SRR4302541.2415606/1‑94 (MQ=60)
                           AGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGA                                                                   <  SRR4302541.2402650/94‑1 (MQ=60)
                           AGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGA                                                                   <  SRR4302541.7528817/94‑1 (MQ=60)
                           AGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGA                                                                   >  SRR4302541.7954370/1‑94 (MQ=60)
                            GGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGAT                                                                  <  SRR4302541.241121/94‑1 (MQ=60)
                            GGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGAT                                                                  <  SRR4302541.7979303/94‑1 (MQ=60)
                             GTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATA                                                                 >  SRR4302541.8277565/1‑94 (MQ=60)
                             GTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATA                                                                 <  SRR4302541.8810709/94‑1 (MQ=60)
                               AAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACG                                                               >  SRR4302541.6768185/1‑94 (MQ=60)
                                AAAGTGTTCAGCGTTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGG                                                              <  SRR4302541.5774054/94‑1 (MQ=60)
                                AAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGG                                                              <  SRR4302541.2502205/94‑1 (MQ=60)
                                 AAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGT                                                             <  SRR4302541.356162/94‑1 (MQ=60)
                                 AAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGT                                                             >  SRR4302541.3832780/1‑94 (MQ=60)
                                 AAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGT                                                             >  SRR4302541.3832781/1‑94 (MQ=60)
                                 AAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGT                                                             <  SRR4302541.8455664/94‑1 (MQ=60)
                                 AAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGT                                                             <  SRR4302541.8761940/94‑1 (MQ=60)
                                  AGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGCTAACCGGTAACGATACGGTC                                                            >  SRR4302541.7718554/1‑94 (MQ=60)
                                  AGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTC                                                            >  SRR4302541.3380007/1‑94 (MQ=60)
                                  AGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTC                                                            <  SRR4302541.3969886/94‑1 (MQ=60)
                                  AGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTC                                                            >  SRR4302541.2149638/1‑94 (MQ=60)
                                   GTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCC                                                           <  SRR4302541.2385665/94‑1 (MQ=60)
                                    TGTTCAGCGGTGTCGAGAAAACCATCGTGATAACGCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCA                                                          >  SRR4302541.6094630/1‑94 (MQ=60)
                                    TGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCC                                                          >  SRR4302541.4541428/1‑94 (MQ=60)
                                    TGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCA                                                          <  SRR4302541.8422749/94‑1 (MQ=60)
                                    TGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCA                                                          <  SRR4302541.5691163/94‑1 (MQ=60)
                                    GGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCA                                                          <  SRR4302541.3014827/94‑1 (MQ=60)
                                     GTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCAC                                                         <  SRR4302541.1711390/94‑1 (MQ=60)
                                      TTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACC                                                        <  SRR4302541.823865/94‑1 (MQ=60)
                                      TTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACC                                                        <  SRR4302541.4339434/94‑1 (MQ=60)
                                       TCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCA                                                       >  SRR4302541.3212441/1‑94 (MQ=60)
                                         AGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGC                                                     <  SRR4302541.6936461/94‑1 (MQ=60)
                                          GCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCG                                                    >  SRR4302541.2189030/1‑94 (MQ=60)
                                          GCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATAAGGTCCACCAGCG                                                    <  SRR4302541.3212057/94‑1 (MQ=60)
                                            GGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTA                                                  <  SRR4302541.5354645/94‑1 (MQ=60)
                                            GGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTA                                                  <  SRR4302541.8419323/94‑1 (MQ=60)
                                             ggtcCGAGAAAACCATCGAGATAACCCATTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAG                                                 <  SRR4302541.6971971/90‑1 (MQ=60)
                                             GTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAG                                                 <  SRR4302541.3250325/94‑1 (MQ=60)
                                             GTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAG                                                 >  SRR4302541.8208793/1‑94 (MQ=60)
                                             GTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAG                                                 >  SRR4302541.7104526/1‑94 (MQ=60)
                                             GTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAG                                                 <  SRR4302541.8059592/94‑1 (MQ=60)
                                             GTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAG                                                 <  SRR4302541.1587182/94‑1 (MQ=60)
                                              TGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGA                                                >  SRR4302541.5076612/1‑94 (MQ=60)
                                              TGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGGAACGATACGGTCCACCAGCGTAGA                                                >  SRR4302541.8416657/1‑94 (MQ=60)
                                               GTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAA                                               >  SRR4302541.7451906/1‑94 (MQ=60)
                                                TCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAAC                                              >  SRR4302541.390894/1‑94 (MQ=60)
                                                 CGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAAAA                                             >  SRR4302541.1574949/1‑94 (MQ=60)
                                                  GAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGCACAG                                            >  SRR4302541.5674735/1‑94 (MQ=60)
                                                  GAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAG                                            <  SRR4302541.5935223/94‑1 (MQ=60)
                                                  GAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAG                                            >  SRR4302541.3340538/1‑94 (MQ=60)
                                                  GAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAA                                            >  SRR4302541.3919361/1‑94 (MQ=60)
                                                   AGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGA                                           <  SRR4302541.7173242/94‑1 (MQ=60)
                                                    GAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGAGTAGAACAGAA                                          >  SRR4302541.1809275/1‑94 (MQ=60)
                                                     AAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAG                                         <  SRR4302541.82937/94‑1 (MQ=60)
                                                      AAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGACCAGAAGC                                        >  SRR4302541.1229906/1‑94 (MQ=60)
                                                      AAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGC                                        >  SRR4302541.943595/1‑94 (MQ=60)
                                                      AAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGC                                        >  SRR4302541.5580703/1‑94 (MQ=60)
                                                       AACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCT                                       <  SRR4302541.5365716/94‑1 (MQ=60)
                                                       AACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCT                                       <  SRR4302541.5054078/94‑1 (MQ=60)
                                                        ACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTG                                      <  SRR4302541.6009888/94‑1 (MQ=60)
                                                         CCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGT                                     <  SRR4302541.1431487/94‑1 (MQ=60)
                                                         CCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGT                                     >  SRR4302541.3500536/1‑94 (MQ=60)
                                                          CATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTT                                    <  SRR4302541.5254337/94‑1 (MQ=60)
                                                          CATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTT                                    <  SRR4302541.5254336/94‑1 (MQ=60)
                                                          CATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTT                                    >  SRR4302541.3971683/1‑94 (MQ=60)
                                                          CATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTT                                    <  SRR4302541.2697991/94‑1 (MQ=60)
                                                          CATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTT                                    >  SRR4302541.4750937/1‑94 (MQ=60)
                                                          CATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTT                                    >  SRR4302541.2813965/1‑94 (MQ=60)
                                                          CATCGTGATAACCAAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTT                                    >  SRR4302541.2590306/1‑94 (MQ=60)
                                                           ATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTA                                   >  SRR4302541.4297517/1‑94 (MQ=60)
                                                           ATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTA                                   >  SRR4302541.1314096/1‑94 (MQ=60)
                                                           ATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTA                                   >  SRR4302541.7610129/1‑94 (MQ=60)
                                                            TCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAG                                  <  SRR4302541.1461965/94‑1 (MQ=60)
                                                             CGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGC                                 <  SRR4302541.527524/94‑1 (MQ=60)
                                                             CGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCATAGAACAGAAGCTGTTAGC                                 >  SRR4302541.3169353/1‑94 (MQ=60)
                                                              GTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCC                                >  SRR4302541.5417570/1‑94 (MQ=60)
                                                              GTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCC                                <  SRR4302541.7169432/94‑1 (MQ=60)
                                                              GTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCC                                >  SRR4302541.4143528/1‑94 (MQ=60)
                                                              GTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGGAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCC                                >  SRR4302541.4143527/1‑94 (MQ=60)
                                                               TGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCT                               <  SRR4302541.6669613/94‑1 (MQ=60)
                                                               TGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCT                               <  SRR4302541.5049570/94‑1 (MQ=60)
                                                               TGATAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCT                               >  SRR4302541.1486192/1‑94 (MQ=60)
                                                               TGATAACCCAGTTCTTCTTACAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGCAGAACAGAAGCTGTTAGCCT                               >  SRR4302541.4764500/1‑94 (MQ=60)
                                                                GATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTG                              >  SRR4302541.7378196/1‑94 (MQ=60)
                                                                GATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTG                              <  SRR4302541.2206174/94‑1 (MQ=60)
                                                                 ATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGA                             >  SRR4302541.3680886/1‑94 (MQ=60)
                                                                  TAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGAT                            <  SRR4302541.3491735/94‑1 (MQ=60)
                                                                  TAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGAT                            <  SRR4302541.1166434/94‑1 (MQ=60)
                                                                   AACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATC                           <  SRR4302541.6411266/94‑1 (MQ=60)
                                                                   AACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATC                           >  SRR4302541.933352/1‑94 (MQ=60)
                                                                     CCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCA                         <  SRR4302541.5871265/94‑1 (MQ=60)
                                                                     CCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCA                         <  SRR4302541.1972111/94‑1 (MQ=60)
                                                                     CCCAGTTCTTCTTCCAGTTTAGCCGCTTCACCGCGCGGATAACCGGTAACGACACGGTCCTCCAGTGTAGAACAGAATCTGTTAGCCTGATCCA                         >  SRR4302541.7923754/1‑94 (MQ=60)
                                                                       CAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGC                       >  SRR4302541.8790918/1‑94 (MQ=60)
                                                                        AGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCC                      <  SRR4302541.3341717/94‑1 (MQ=60)
                                                                         GTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCT                     >  SRR4302541.3819286/1‑94 (MQ=60)
                                                                         GTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCA                     >  SRR4302541.2017574/1‑94 (MQ=60)
                                                                           TCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATT                   <  SRR4302541.542949/94‑1 (MQ=60)
                                                                            CTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTG                  >  SRR4302541.1684005/1‑94 (MQ=60)
                                                                               CTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAAT               <  SRR4302541.8465702/94‑1 (MQ=60)
                                                                               CTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAAT               >  SRR4302541.392595/1‑94 (MQ=60)
                                                                               CTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAAT               >  SRR4302541.8062925/1‑94 (MQ=60)
                                                                                TTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAATGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATA              >  SRR4302541.1095963/1‑94 (MQ=60)
                                                                                TTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATA              >  SRR4302541.8816386/1‑94 (MQ=60)
                                                                                TTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATA              >  SRR4302541.1095964/1‑94 (MQ=60)
                                                                                TTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATA              >  SRR4302541.5325187/1‑94 (MQ=60)
                                                                                 TCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAATAGAAGCTGTTAGCCTGATCCAGCCATTGAATAA             >  SRR4302541.8562675/1‑94 (MQ=60)
                                                                                 TCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAA             <  SRR4302541.3855985/94‑1 (MQ=60)
                                                                                  CCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAA            >  SRR4302541.95813/1‑94 (MQ=60)
                                                                                   CAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAGCGATAAGTTCCTCCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAAT           <  SRR4302541.6377642/94‑1 (MQ=60)
                                                                                   CAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAAT           <  SRR4302541.405061/94‑1 (MQ=60)
                                                                                   CAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAAT           <  SRR4302541.2571355/94‑1 (MQ=60)
                                                                                   CAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAAT           <  SRR4302541.6685054/94‑1 (MQ=60)
                                                                                   CAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAAT           >  SRR4302541.7878/1‑94 (MQ=60)
                                                                                   CAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTACAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAAT           <  SRR4302541.5140485/94‑1 (MQ=60)
                                                                                    cggTTAGCCGCTTCAGCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATG          <  SRR4302541.2945572/91‑1 (MQ=60)
                                                                                    AGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATG          >  SRR4302541.3585641/1‑94 (MQ=60)
                                                                                     GTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGC         >  SRR4302541.2899240/1‑94 (MQ=60)
                                                                                      TTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCT        <  SRR4302541.1872518/94‑1 (MQ=60)
                                                                                      TTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCT        <  SRR4302541.6603862/94‑1 (MQ=60)
                                                                                      TTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCT        <  SRR4302541.2043747/94‑1 (MQ=60)
                                                                                        TAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTC      >  SRR4302541.3541165/1‑94 (MQ=60)
                                                                                        TAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTC      >  SRR4302541.6934425/1‑94 (MQ=60)
                                                                                         AGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCT     >  SRR4302541.6331438/1‑94 (MQ=60)
                                                                                         AGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCT     >  SRR4302541.4189460/1‑94 (MQ=60)
                                                                                          GCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTG    <  SRR4302541.6059086/94‑1 (MQ=60)
                                                                                          GCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTG    <  SRR4302541.7955624/94‑1 (MQ=60)
                                                                                          GCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTG    <  SRR4302541.6330122/94‑1 (MQ=60)
                                                                                          GCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTG    <  SRR4302541.2676395/94‑1 (MQ=60)
                                                                                           CCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGG   <  SRR4302541.5883060/94‑1 (MQ=60)
                                                                                           CCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGG   >  SRR4302541.2676738/1‑94 (MQ=60)
                                                                                            CGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGC  >  SRR4302541.5949988/1‑94 (MQ=60)
                                                                                            CGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGACTGATCCAGCCATTGAATAAATGCTTCTGGC  >  SRR4302541.5185553/1‑94 (MQ=60)
                                                                                             |                                                                                            
AAGGATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGC  >  NC_000913/1607941‑1608126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑