Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,609,760 |
G→A |
A40V (GCC→GTC) |
b1522 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,609,760 | 0 | G | A | 100.0%
| 932.4
/ NA
| 239 | A40V (GCC→GTC) | b1522 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (127/112); total (127/112) |
Only 100 of 243 total aligned reads displayed.
GCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGGCGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGTTGAG > NC_000913/1609670‑1609849
|
gCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACg > 2:4741157/1‑93 (MQ=255)
gCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACg < 2:2240554/93‑1 (MQ=255)
gCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACg > 2:1396260/1‑93 (MQ=255)
gCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACg > 2:5957034/1‑93 (MQ=255)
gCACACCAGATTAATGCAGGCAGCGCGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACg < 1:1197097/93‑1 (MQ=255)
cacaCCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACgg > 2:1578214/1‑93 (MQ=255)
cacaCCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACgg > 1:3951258/1‑93 (MQ=255)
cacCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGc > 1:2226078/1‑93 (MQ=255)
cacCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGc > 1:2517991/1‑93 (MQ=255)
ccAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGcat > 1:5804968/1‑93 (MQ=255)
cAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGcatc > 1:1059925/1‑93 (MQ=255)
aGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAGGGGCGCTGAAGGGcatga > 2:6011624/1‑91 (MQ=255)
aTTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCatcatc > 2:2550190/1‑93 (MQ=255)
tAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTg > 1:3136737/1‑93 (MQ=255)
tAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTg < 2:3574448/93‑1 (MQ=255)
aaTGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGt < 1:6449873/93‑1 (MQ=255)
aTGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGtt > 2:1301837/1‑93 (MQ=255)
tGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTc < 2:4367871/93‑1 (MQ=255)
tGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTc < 2:5404944/93‑1 (MQ=255)
ggcagCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCt < 1:558980/93‑1 (MQ=255)
ggcagCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCt > 2:4851150/1‑93 (MQ=255)
gcagCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCtt < 1:4057545/93‑1 (MQ=255)
gcagCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCtt < 1:2034079/93‑1 (MQ=255)
agCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTa < 1:857941/93‑1 (MQ=255)
gCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTaa > 2:3506783/1‑93 (MQ=255)
gggAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAg > 2:4515501/1‑93 (MQ=255)
ggAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAgc < 1:4345667/93‑1 (MQ=255)
ggAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAgc > 1:4634245/1‑93 (MQ=255)
ggAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAgc < 2:4421317/93‑1 (MQ=255)
ggAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAgc > 2:1937437/1‑93 (MQ=255)
gAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAgcg > 2:5969933/1‑93 (MQ=255)
aaCGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAgcgc > 1:1351930/1‑93 (MQ=255)
aaCGCCAGACTCCCCGCTCCGCCAATAACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAgcgc < 1:6103340/93‑1 (MQ=255)
aCGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGcgcg < 1:4214939/93‑1 (MQ=255)
aCGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGcgcg > 2:5501481/1‑93 (MQ=255)
aCGCCAGACTCCCCGCTCAGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGcgcg > 2:134729/1‑93 (MQ=255)
cGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCgg < 1:347835/93‑1 (MQ=255)
cGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCgg < 2:195471/93‑1 (MQ=255)
ccAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGgca < 2:6409239/93‑1 (MQ=255)
cAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGgcag > 1:4563489/1‑93 (MQ=255)
aGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGgcagc < 2:5175441/93‑1 (MQ=255)
aGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGgcagc > 2:6452056/1‑93 (MQ=255)
aGACTCCCCGCTCCGCCAAAGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGgcagc > 1:6275527/1‑93 (MQ=255)
gACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGgcagca > 1:4958690/1‑93 (MQ=255)
gACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGgcagca > 1:3729371/1‑93 (MQ=255)
aCTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCAc < 2:4048040/93‑1 (MQ=255)
aCTCCCCGCACCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCAc < 2:5806905/93‑1 (MQ=255)
tCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTc > 1:5190056/1‑93 (MQ=255)
tCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTc > 1:2796218/1‑93 (MQ=255)
tCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTc > 2:313886/1‑93 (MQ=255)
ccccGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTcc < 1:3077053/93‑1 (MQ=255)
cccGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTcct < 2:6089972/93‑2 (MQ=255)
cccGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCa < 2:663286/93‑1 (MQ=255)
ccGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAg > 1:3236441/1‑93 (MQ=255)
ccGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAg < 1:767131/93‑1 (MQ=255)
tCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAAt < 2:1452624/93‑1 (MQ=255)
ccGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATa > 2:4278887/1‑93 (MQ=255)
ccGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATa < 2:2566045/93‑1 (MQ=255)
ccGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATa > 2:2140591/1‑93 (MQ=255)
cGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACTGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAg > 2:2809740/1‑93 (MQ=255)
cGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAg < 1:4898990/93‑1 (MQ=255)
cGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAg > 1:2292923/1‑93 (MQ=255)
ccAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGcc < 2:3742389/93‑1 (MQ=255)
aaTGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCaa > 2:1075524/1‑93 (MQ=255)
aTGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAAc < 1:3426926/93‑1 (MQ=255)
gACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGt < 2:3000864/93‑1 (MQ=255)
gACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGt > 1:2956033/1‑93 (MQ=255)
cTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCa > 1:3584183/1‑93 (MQ=255)
ccGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCa > 1:3307298/1‑93 (MQ=255)
aGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATAc > 1:1824845/1‑93 (MQ=255)
aGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATAc > 2:6231408/1‑93 (MQ=255)
aGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATAc < 2:2706095/93‑1 (MQ=255)
ggCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACa > 2:5882043/1‑93 (MQ=255)
ggCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACa > 1:4797517/1‑93 (MQ=255)
cAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAg > 1:2367662/1‑93 (MQ=255)
aaTAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAgg > 1:3758492/1‑93 (MQ=255)
aTAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGc < 1:4868027/93‑1 (MQ=255)
ccGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGa < 2:779880/93‑1 (MQ=255)
ccGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGa < 1:5942740/93‑1 (MQ=255)
cGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGAt < 2:1214900/93‑1 (MQ=255)
cacaATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCaa > 2:2024140/1‑93 (MQ=255)
acaATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAac < 1:1223442/93‑1 (MQ=255)
caATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAaca > 1:1143997/1‑93 (MQ=255)
caATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAaca > 1:5705207/1‑93 (MQ=255)
caATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAaca < 2:5250241/93‑1 (MQ=255)
aaTAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAacac > 1:1682426/1‑93 (MQ=255)
aaGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCGAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGcc < 2:3432394/93‑1 (MQ=255)
aaGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGcc < 2:3696279/93‑1 (MQ=255)
aGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGACTAGCCAACGTCAGCATACAAGGCACGATCAACACGccc > 2:2621571/1‑93 (MQ=255)
aGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGccc < 2:5287733/93‑1 (MQ=255)
aGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGccc < 2:4453077/93‑1 (MQ=255)
aGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGccc > 1:5657087/1‑93 (MQ=255)
aGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGccc < 1:2426058/93‑1 (MQ=255)
gcgcGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCg > 2:3007611/1‑93 (MQ=255)
cgcgATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGt < 2:2162484/93‑1 (MQ=255)
gcgATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGtt < 2:3297264/93‑1 (MQ=255)
gcgATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGtt > 1:5557393/1‑93 (MQ=255)
gcgATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGtt > 2:3865539/1‑93 (MQ=255)
cgATGACGGGCATCATCTGTTCTGCTTTACAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGTTg < 2:2493742/93‑1 (MQ=255)
gATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCTCGATCAACACGCCCGTTga < 1:6325127/93‑1 (MQ=255)
|
GCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGGCGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGTTGAG > NC_000913/1609670‑1609849
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGGCGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGTTGAGAATT > NC_000913/1609667‑1609853
|
ACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGA > SRR4302534.2733164/1‑94 (MQ=60)
ACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGA < SRR4302534.4101066/94‑1 (MQ=60)
TGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACG < SRR4302534.5039798/94‑1 (MQ=60)
TGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACG < SRR4302534.326823/94‑1 (MQ=60)
TGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACG < SRR4302534.2544937/94‑1 (MQ=60)
GCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGG > SRR4302534.341651/1‑94 (MQ=60)
GCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGG > SRR4302534.4057034/1‑94 (MQ=60)
GCACACCAGATTAATGCAGGCAGCGCGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGG < SRR4302534.1228599/94‑1 (MQ=60)
ACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGC > SRR4302534.2584847/1‑94 (MQ=60)
ACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGC > SRR4302534.2285040/1‑94 (MQ=60)
ACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCAT > SRR4302534.5962517/1‑94 (MQ=60)
ACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCAT > SRR4302534.2395927/1‑94 (MQ=60)
CCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATC > SRR4302534.1087393/1‑94 (MQ=60)
AGATTAATGCAGGCAGCGGGAACGCCAGCCTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGCTGACGGGCATCAT < SRR4302534.5289140/94‑1 (MQ=60)
GATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACAAATTAAGCGGGATGACGGGCATCATC > SRR4302534.1249994/1‑94 (MQ=60)
TTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTG > SRR4302534.3219227/1‑94 (MQ=60)
TTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTG < SRR4302534.6645288/94‑1 (MQ=60)
AATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTT < SRR4302534.5010560/94‑1 (MQ=60)
AATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTT < SRR4302534.6623689/94‑1 (MQ=60)
TGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCT < SRR4302534.2528075/94‑1 (MQ=60)
GCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTG < SRR4302534.598671/94‑1 (MQ=60)
CAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAAT‑ACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCT > SRR4302534.4129179/1‑94 (MQ=60)
GGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTT < SRR4302534.572754/94‑1 (MQ=60)
GGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTT > SRR4302534.5715218/1‑94 (MQ=60)
GCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTT < SRR4302534.2087269/94‑1 (MQ=60)
GCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTT < SRR4302534.4166386/94‑1 (MQ=60)
CAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTA > SRR4302534.6413037/1‑94 (MQ=60)
AGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAA < SRR4302534.879597/94‑1 (MQ=60)
AGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAA > SRR4302534.3524620/1‑94 (MQ=60)
AGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAA > SRR4302534.4817966/1‑94 (MQ=60)
AGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAA < SRR4302534.1731819/94‑1 (MQ=60)
CGGGAACGCCAGACTCCCCGCTCCGCCAATGCCTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTACAG > SRR4302534.2853688/1‑94 (MQ=60)
GGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGNGCATCATCTGTTCNGCTTTAAAGC > SRR4302534.2333583/1‑94 (MQ=60)
GGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGC > SRR4302534.2026101/1‑94 (MQ=60)
GGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGC > SRR4302534.3279330/1‑94 (MQ=60)
GGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGC > SRR4302534.4760003/1‑94 (MQ=60)
GGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGC < SRR4302534.4472000/94‑1 (MQ=60)
GGAAACGCCCCACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACACTAAGCGCGATGACGGGCATCATCCGTTCTGCTTTAAAGC < SRR4302534.2448643/94‑1 (MQ=60)
GGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCG < SRR4302534.4463023/94‑1 (MQ=60)
GGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATAATCTGTTCTGCTTTAAAGCG > SRR4302534.3854751/1‑94 (MQ=60)
GGAACGCCAGACACCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCG < SRR4302534.3280850/94‑1 (MQ=60)
GAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGC > SRR4302534.1387569/1‑94 (MQ=60)
GAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGC < SRR4302534.807325/94‑1 (MQ=60)
AACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCG > SRR4302534.6249825/1‑94 (MQ=60)
AACGCCAGACTCCCCGCTCCGCCAATAACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCG < SRR4302534.6269301/94‑1 (MQ=60)
ACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGG < SRR4302534.4328621/94‑1 (MQ=60)
CGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGC < SRR4302534.356758/94‑1 (MQ=60)
GCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCA > SRR4302534.4429824/1‑94 (MQ=60)
GCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCA > SRR4302534.4307112/1‑94 (MQ=60)
CCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAG > SRR4302534.4687211/1‑94 (MQ=60)
CAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGC > SRR4302534.2038073/1‑94 (MQ=60)
CAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGC > SRR4302534.1605595/1‑94 (MQ=60)
CAGACTCCCCGCTCCGCCAAAGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGC > SRR4302534.6445407/1‑94 (MQ=60)
AGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCA > SRR4302534.5092971/1‑94 (MQ=60)
AGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCA < SRR4302534.3641479/94‑1 (MQ=60)
AGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCA > SRR4302534.3829586/1‑94 (MQ=60)
ACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACT > SRR4302534.3962181/1‑94 (MQ=60)
CTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTC < SRR4302534.4977522/94‑1 (MQ=60)
CTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTC > SRR4302534.5329971/1‑94 (MQ=60)
CTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTC > SRR4302534.2985140/1‑94 (MQ=60)
CTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTC > SRR4302534.2869756/1‑94 (MQ=60)
CCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCA < SRR4302534.3157888/94‑1 (MQ=60)
CCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCA > SRR4302534.5516800/1‑94 (MQ=60)
CCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAG > SRR4302534.3322534/1‑94 (MQ=60)
CCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGG < SRR4302534.1648441/94‑1 (MQ=60)
CCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGG < SRR4302534.786198/94‑1 (MQ=60)
CCGCTCCGCCAATCACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGG < SRR4302534.1145628/94‑1 (MQ=60)
CTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAAT > SRR4302534.5684795/1‑94 (MQ=60)
CTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAAT > SRR4302534.4742239/1‑94 (MQ=60)
CTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAAT < SRR4302534.1192637/94‑1 (MQ=60)
CTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAAT > SRR4302534.3459327/1‑94 (MQ=60)
TCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATA < SRR4302534.2182463/94‑1 (MQ=60)
TCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATA < SRR4302534.3362050/94‑1 (MQ=60)
TCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATA < SRR4302534.3630357/94‑1 (MQ=60)
TCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATA > SRR4302534.4982940/1‑94 (MQ=60)
CCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAG > SRR4302534.2353780/1‑94 (MQ=60)
CGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGC < SRR4302534.5031808/94‑1 (MQ=60)
CAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAA > SRR4302534.3018704/1‑94 (MQ=60)
ATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACG < SRR4302534.3518990/94‑1 (MQ=60)
TGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGT > SRR4302534.3033509/1‑94 (MQ=60)
ACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCA > SRR4302534.5846329/1‑94 (MQ=60)
ACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCA > SRR4302534.3680598/1‑94 (MQ=60)
TACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGC > SRR4302534.2543258/1‑94 (MQ=60)
ACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCA > SRR4302534.3395616/1‑94 (MQ=60)
CGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATA > SRR4302534.311934/1‑94 (MQ=60)
GAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATAC > SRR4302534.1872303/1‑94 (MQ=60)
AGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACA > SRR4302534.4927782/1‑94 (MQ=60)
AGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACA > SRR4302534.579691/1‑94 (MQ=60)
AGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACA > SRR4302534.1372759/1‑94 (MQ=60)
GCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAG > SRR4302534.2430524/1‑94 (MQ=60)
CAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGG > SRR4302534.3859416/1‑94 (MQ=60)
ATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCA < SRR4302534.5000076/94‑1 (MQ=60)
TAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCAC < SRR4302534.3769881/94‑1 (MQ=60)
AACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACG < SRR4302534.3162044/94‑1 (MQ=60)
CCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGAT < SRR4302534.6615592/94‑1 (MQ=60)
CCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGAT < SRR4302534.6104090/94‑1 (MQ=60)
GACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCA > SRR4302534.6467343/1‑94 (MQ=60)
CACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAAC < SRR4302534.5091324/94‑1 (MQ=60)
ACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACA > SRR4302534.5859753/1‑94 (MQ=60)
ACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACA > SRR4302534.1173946/1‑94 (MQ=60)
ACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACA < SRR4302534.1255657/94‑1 (MQ=60)
CAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACAC < SRR4302534.574963/94‑1 (MQ=60)
CAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACAC > SRR4302534.4506494/1‑94 (MQ=60)
CAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACAC > SRR4302534.1726185/1‑94 (MQ=60)
AATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACG < SRR4302534.5968878/94‑1 (MQ=60)
TAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCC > SRR4302534.6629115/1‑94 (MQ=60)
TAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCC > SRR4302534.5078548/1‑94 (MQ=60)
AAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCC > SRR4302534.5810230/1‑94 (MQ=60)
AAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCC < SRR4302534.1242374/94‑1 (MQ=60)
AAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCC < SRR4302534.627966/94‑1 (MQ=60)
AGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCG < SRR4302534.4021491/94‑1 (MQ=60)
AGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCG < SRR4302534.2410103/94‑1 (MQ=60)
AGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCG < SRR4302534.2490564/94‑1 (MQ=60)
CGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGTT > SRR4302534.5707429/1‑94 (MQ=60)
GCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGTTG < SRR4302534.4214706/94‑1 (MQ=60)
GATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCTCGATCAACACGCCCGTTGAG < SRR4302534.6496013/94‑1 (MQ=60)
GATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGTTGAG > SRR4302534.5933011/1‑94 (MQ=60)
ATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGTTGAGA > SRR4302534.5055724/1‑94 (MQ=60)
ACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGTTGAGAATT < SRR4302534.4983251/94‑1 (MQ=60)
ACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGTTGAGAATT < SRR4302534.4759536/94‑1 (MQ=60)
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ACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGGCGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGTTGAGAATT > NC_000913/1609667‑1609853
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
