Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,616,532 |
G→A |
T134I (ACC→ATC) |
ydeB ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,616,532 | 0 | G | A | 99.6%
| 956.3
/ ‑5.3
| 266 | T134I (ACC→ATC) | ydeB | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (119/146); total (120/146) |
| Fisher's exact test for biased strand distribution p-value = 4.51e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.82e-01 |
Only 100 of 280 total aligned reads displayed.
AAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCC > NC_000913/1616440‑1616624
|
aGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTc > 1:3670478/1‑93 (MQ=255)
aTCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTccg > 1:2566781/1‑92 (MQ=255)
aTCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTccc < 1:6226383/93‑1 (MQ=255)
aTCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTccc > 1:8124782/1‑93 (MQ=255)
aTCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTccc < 2:2509828/93‑1 (MQ=255)
aTCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTccc < 2:319127/93‑1 (MQ=255)
cAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCgg > 2:2097709/1‑93 (MQ=255)
aGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGa < 2:3292572/93‑1 (MQ=255)
aGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGa < 1:5358369/93‑1 (MQ=255)
gcggcggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGAc < 1:5818675/93‑1 (MQ=255)
gcggcggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGAc > 2:1016205/1‑93 (MQ=255)
gcggcggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACACCGAGCTAATAATCATCGCTATGATTCCCGGAc < 1:7225222/93‑1 (MQ=255)
cgtcggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGAcc < 1:785159/90‑1 (MQ=255)
cggcggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGAcc < 1:6679265/93‑1 (MQ=255)
cggcggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGAcc < 1:3214344/93‑1 (MQ=255)
cggcggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGAcc < 2:4831532/93‑1 (MQ=255)
gcggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCgg > 1:4816826/1‑93 (MQ=255)
gcgcAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAg > 2:3523686/1‑93 (MQ=255)
gcAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTa > 1:5252252/1‑93 (MQ=255)
gcAACCATCAGTACCCAATCAGCGAAGGCTGAACTCTGACGCACTGCGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTa > 2:5704918/1‑93 (MQ=255)
cAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTAc > 2:1823254/1‑93 (MQ=255)
aaCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACt < 2:8523285/93‑1 (MQ=255)
aaCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACt < 1:4696605/93‑1 (MQ=255)
aCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACtt < 2:2600509/93‑1 (MQ=255)
aCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACtt < 1:8630782/93‑1 (MQ=255)
aCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACtt > 2:5953967/1‑93 (MQ=255)
ccATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTg > 2:1257094/1‑93 (MQ=255)
tCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCa > 2:3671151/1‑93 (MQ=255)
cAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCAt > 2:4477932/1‑93 (MQ=255)
ccAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAg < 1:3628699/93‑1 (MQ=255)
ccAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAg > 2:5841177/1‑93 (MQ=255)
ccAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAg > 2:6977134/1‑93 (MQ=255)
cAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGc < 2:2315279/93‑1 (MQ=255)
cAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGc > 2:3732521/1‑93 (MQ=255)
aaTCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCg > 2:6112231/1‑93 (MQ=255)
aaTCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCg > 2:8685036/1‑93 (MQ=255)
aaTCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCg < 1:171231/93‑1 (MQ=255)
acAGCGAAGGTTGACCTCTGACGCACTGTCGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGc < 2:674031/92‑1 (MQ=255)
acAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGc < 1:6014881/92‑1 (MQ=255)
ggTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGc < 1:6691173/93‑1 (MQ=255)
ggTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGc > 2:1454910/1‑93 (MQ=255)
tGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAat < 2:2387169/93‑1 (MQ=255)
tGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAat > 1:3735228/1‑93 (MQ=255)
gAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAata < 2:7198358/93‑1 (MQ=255)
aCTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATAtt < 2:5426055/93‑1 (MQ=255)
tctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTgg > 2:6564358/1‑93 (MQ=255)
tctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTgg < 2:5300401/93‑1 (MQ=255)
ctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGc < 1:8383534/93‑1 (MQ=255)
tGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCa > 1:701008/1‑93 (MQ=255)
gccGCACTGTGGACGCCGAGCTAATAAGCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAc < 1:7751573/91‑1 (MQ=255)
gACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAc < 1:3126996/93‑1 (MQ=255)
gACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAc > 2:4932169/1‑93 (MQ=255)
cGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTg < 2:3085379/93‑1 (MQ=255)
gCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTgg < 1:5126482/93‑1 (MQ=255)
gCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTgg > 1:5781678/1‑93 (MQ=255)
cACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTggg < 1:3104114/93‑1 (MQ=255)
cTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGtt > 1:7104191/1‑93 (MQ=255)
gtgGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCa > 1:8321379/1‑93 (MQ=255)
gACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCt < 2:5320931/93‑1 (MQ=255)
gACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCt < 1:2202996/93‑1 (MQ=255)
aCGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCtt > 2:7959501/1‑93 (MQ=255)
cGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGAAATATTGGCACTGGGTTCATCTTc < 2:6885070/93‑1 (MQ=255)
gCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTcc < 2:4980765/93‑1 (MQ=255)
gCCGAGATAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTcc < 2:1146369/93‑1 (MQ=255)
ccGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCa < 1:4253353/93‑1 (MQ=255)
cGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAg > 2:6197936/1‑93 (MQ=255)
cGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAg > 1:6634912/1‑93 (MQ=255)
gAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGc < 1:753559/93‑1 (MQ=255)
gAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGc > 2:820250/1‑93 (MQ=255)
gAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGc > 1:2492400/1‑93 (MQ=255)
gAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGc > 2:2024381/1‑93 (MQ=255)
gAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGc < 1:5477758/93‑1 (MQ=255)
aGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGct < 1:2844587/93‑1 (MQ=255)
gCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGctc > 1:8019250/1‑93 (MQ=255)
gCTAATAACCATCGCGATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGctc < 2:7563224/93‑1 (MQ=255)
taataaTCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCtt > 2:2751103/1‑93 (MQ=255)
taataaTCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCtt > 2:2184916/1‑93 (MQ=255)
aataatCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTc < 2:2806637/93‑1 (MQ=255)
ataatCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTcc < 1:4867523/93‑1 (MQ=255)
ataatCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTcc < 1:1902690/93‑1 (MQ=255)
taatCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCg > 2:6454586/1‑93 (MQ=255)
aatCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGa < 1:5633741/93‑1 (MQ=255)
atcatcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGAc > 2:5096560/1‑93 (MQ=255)
atcatcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGAc > 2:5492748/1‑93 (MQ=255)
tccgcGCTATGATTACCGGACCGGCAGTACTTTGCATTGCCAGCGCAACAAAGGCAATATTGGCACGAGGTTCATCTTCCAGCTCTTCCGACt < 1:1749808/89‑1 (MQ=255)
catcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACtt < 2:1660295/93‑1 (MQ=255)
catcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACtt < 1:1355453/93‑1 (MQ=255)
atcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTg > 1:3413144/1‑93 (MQ=255)
atcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTg > 2:2913228/1‑93 (MQ=255)
tcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCTACTTGc > 2:7922236/1‑93 (MQ=255)
tcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGc > 1:3823767/1‑93 (MQ=255)
gCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCtt < 1:4316517/93‑1 (MQ=255)
gCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCtt < 1:5873010/93‑1 (MQ=255)
gCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCtt < 1:7660329/93‑1 (MQ=255)
gCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCtt < 1:1049832/93‑1 (MQ=255)
cTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCttt > 2:3945784/1‑93 (MQ=255)
tATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCtttt < 2:7017642/93‑1 (MQ=255)
tATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCtttt < 1:4088944/93‑1 (MQ=255)
tATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCtttt > 1:4394158/1‑93 (MQ=255)
tATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCtttt > 1:6401235/1‑93 (MQ=255)
|
AAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCC > NC_000913/1616440‑1616624
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCT > NC_000913/1616439‑1616625
|
AAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGA < SRR4302541.1847215/94‑1 (MQ=60)
AAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGA < SRR4302541.3477944/94‑1 (MQ=60)
AAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGAT < SRR4302541.4671061/94‑1 (MQ=60)
AAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGAT < SRR4302541.820879/94‑1 (MQ=60)
AAAGATCAGCGGCGGCGCAGCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATT < SRR4302541.5860895/94‑1 (MQ=60)
AAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATT > SRR4302541.1130062/1‑94 (MQ=60)
AAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATT < SRR4302541.3912912/94‑1 (MQ=60)
AAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATT < SRR4302541.7844732/94‑1 (MQ=60)
AAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATT < SRR4302541.388904/94‑1 (MQ=60)
AAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATT < SRR4302541.5860894/94‑1 (MQ=60)
AAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTC > SRR4302541.3963608/1‑94 (MQ=60)
AAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTC > SRR4302541.3707693/1‑94 (MQ=60)
AGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCC > SRR4302541.6505770/1‑94 (MQ=60)
AGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCC > SRR4302541.4072180/1‑94 (MQ=60)
GATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCG > SRR4302541.2592511/1‑94 (MQ=60)
GATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCC > SRR4302541.8213752/1‑94 (MQ=60)
GATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCC < SRR4302541.2422584/94‑1 (MQ=60)
ATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCG < SRR4302541.6290001/94‑1 (MQ=60)
ATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCG > SRR4302541.8080218/1‑94 (MQ=60)
ATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCG < SRR4302541.756112/94‑1 (MQ=60)
TCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGG > SRR4302541.3802979/1‑94 (MQ=60)
CAGCGCCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGA < SRR4302541.5548059/94‑1 (MQ=60)
AGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGAC < SRR4302541.5413404/94‑1 (MQ=60)
AGCGGCCGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGAC < SRR4302541.1796096/94‑1 (MQ=60)
GCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACC < SRR4302541.4495083/94‑1 (MQ=60)
GCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACC < SRR4302541.5877813/94‑1 (MQ=60)
GCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACACCGAGCTAATAATCATCGCTATGATTCCCGGACC < SRR4302541.7302304/94‑1 (MQ=60)
GCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACACCGAGCTAATAATCATCGCTATGATTCCCGGACC < SRR4302541.7302305/94‑1 (MQ=60)
ACGGCGGCGCAACCATCAGTACCCAATCAGCTAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACC < SRR4302541.5698731/94‑1 (MQ=60)
CGTCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCG < SRR4302541.792451/94‑1 (MQ=60)
CGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCG < SRR4302541.6748245/94‑1 (MQ=60)
CGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCG < SRR4302541.4868808/94‑1 (MQ=60)
CGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCG < SRR4302541.3246817/94‑1 (MQ=60)
GGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGG > SRR4302541.4865934/1‑94 (MQ=60)
GGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGG > SRR4302541.5763529/1‑94 (MQ=60)
GGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGG < SRR4302541.5868/94‑1 (MQ=60)
CGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCA > SRR4302541.3330489/1‑94 (MQ=60)
CGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCA < SRR4302541.8829489/94‑1 (MQ=60)
GGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAG < SRR4302541.2948592/94‑1 (MQ=60)
gccgagtcatacggtgccaaccagcgaaggtgtcactccGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGT < SRR4302541.4857310/55‑1 (MQ=60)
GCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGT < SRR4302541.6289723/94‑1 (MQ=60)
CGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTA > SRR4302541.4867887/1‑94 (MQ=60)
CGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTA > SRR4302541.5306380/1‑94 (MQ=60)
CGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTA > SRR4302541.674450/1‑94 (MQ=60)
CAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATT‑CCGGACCGGCAGTACTT > SRR4302541.2579697/1‑94 (MQ=60)
AACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTT > SRR4302541.7073383/1‑94 (MQ=60)
AACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTT < SRR4302541.4744472/94‑1 (MQ=60)
ACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTG < SRR4302541.8723269/94‑1 (MQ=60)
ACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTG > SRR4302541.281441/1‑94 (MQ=60)
ATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCA > SRR4302541.174475/1‑94 (MQ=60)
CAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATT < SRR4302541.791724/94‑1 (MQ=60)
AGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTG < SRR4302541.1769421/94‑1 (MQ=60)
GTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGC < SRR4302541.4219895/94‑1 (MQ=60)
ACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCA < SRR4302541.5312314/94‑1 (MQ=60)
ACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCA > SRR4302541.1545274/1‑94 (MQ=60)
CCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAG > SRR4302541.5587232/1‑94 (MQ=60)
CCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGG > SRR4302541.1498138/1‑94 (MQ=60)
CCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGC < SRR4302541.3142797/94‑1 (MQ=60)
CCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGC < SRR4302541.3641152/94‑1 (MQ=60)
CCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGC < SRR4302541.3665484/94‑1 (MQ=60)
CCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGC < SRR4302541.725230/94‑1 (MQ=60)
CAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCG < SRR4302541.4244615/94‑1 (MQ=60)
CAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCG < SRR4302541.503826/94‑1 (MQ=60)
CAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCG > SRR4302541.2113169/1‑94 (MQ=60)
AATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGG < SRR4302541.172508/94‑1 (MQ=60)
ACAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCA < SRR4302541.6076516/94‑1 (MQ=60)
CAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCAC > SRR4302541.4421546/1‑94 (MQ=60)
AGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACA < SRR4302541.694536/94‑1 (MQ=60)
GAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAG < SRR4302541.2868379/94‑1 (MQ=60)
GAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAG < SRR4302541.4313473/94‑1 (MQ=60)
GAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAG < SRR4302541.3706815/94‑1 (MQ=60)
GAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAG < SRR4302541.3706816/94‑1 (MQ=60)
AAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGG > SRR4302541.5870674/1‑94 (MQ=60)
AGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGC < SRR4302541.5193059/94‑1 (MQ=60)
AGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGC < SRR4302541.5193060/94‑1 (MQ=60)
GGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCA < SRR4302541.2576264/94‑1 (MQ=60)
GGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCA < SRR4302541.5068801/94‑1 (MQ=60)
GGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCA < SRR4302541.6760743/94‑1 (MQ=60)
GTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAA > SRR4302541.5866404/1‑94 (MQ=60)
GTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAA < SRR4302541.4304969/94‑1 (MQ=60)
TTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAAT > SRR4302541.3772833/1‑94 (MQ=60)
TTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAAT < SRR4302541.8614750/94‑1 (MQ=60)
GAACTCAGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATAT < SRR4302541.7820852/94‑1 (MQ=60)
ACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTG > SRR4302541.3145963/1‑94 (MQ=60)
CTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGG < SRR4302541.4852265/94‑1 (MQ=60)
CTCTGACCCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGG < SRR4302541.6641497/94‑1 (MQ=60)
CGCTGACGCCCTGTGGACGCCGAGCTAATGAGCATCTGTATGGTTCCCGGAGCTGCAGTTGTTGGCATTTCCAGCGGCAAAAAGGAAATATTGG < SRR4302541.2906939/94‑1 (MQ=19)
CTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCA > SRR4302541.707598/1‑94 (MQ=60)
CTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCA > SRR4302541.6266199/1‑94 (MQ=60)
CTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCA > SRR4302541.3611976/1‑94 (MQ=60)
CTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCA < SRR4302541.8474332/94‑1 (MQ=60)
GCCGCACTGTGGACGCCGAGCTAATAAGCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACT < SRR4302541.7834041/94‑1 (MQ=60)
GACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACT < SRR4302541.3158617/94‑1 (MQ=60)
GACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACT > SRR4302541.4431732/1‑94 (MQ=60)
CGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGG > SRR4302541.5840456/1‑94 (MQ=60)
GCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGG < SRR4302541.5179177/94‑1 (MQ=60)
CACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGT > SRR4302541.8430998/1‑94 (MQ=60)
CACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGT < SRR4302541.3135558/94‑1 (MQ=60)
CACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGT > SRR4302541.5422862/1‑94 (MQ=60)
ACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTT > SRR4302541.7179808/1‑94 (MQ=60)
ACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTT < SRR4302541.5935865/94‑1 (MQ=60)
CTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTC < SRR4302541.8111848/94‑1 (MQ=60)
CTGTGGACACCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTC < SRR4302541.8610505/94‑1 (MQ=60)
TGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCA > SRR4302541.8411777/1‑94 (MQ=60)
TGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATC > SRR4302541.6351550/1‑94 (MQ=60)
TGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATC > SRR4302541.8404187/1‑94 (MQ=60)
GACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTT < SRR4302541.2224338/94‑1 (MQ=60)
GCGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTC < SRR4302541.6749606/94‑1 (MQ=60)
ACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTC < SRR4302541.214802/94‑1 (MQ=60)
CGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCC > SRR4302541.717005/1‑94 (MQ=60)
GCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCA < SRR4302541.4793706/94‑1 (MQ=60)
GCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCA > SRR4302541.3721759/1‑94 (MQ=60)
GCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCA < SRR4302541.7706315/94‑1 (MQ=60)
CCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAG > SRR4302541.714858/1‑94 (MQ=60)
CCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAG > SRR4302541.6702933/1‑94 (MQ=60)
CCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAG < SRR4302541.4295857/94‑1 (MQ=60)
CGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGC > SRR4302541.8093231/1‑94 (MQ=60)
CGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGC > SRR4302541.2517517/1‑94 (MQ=60)
GAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCT < SRR4302541.760666/94‑1 (MQ=60)
GAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCT < SRR4302541.5428633/94‑1 (MQ=60)
GAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCT < SRR4302541.5533927/94‑1 (MQ=60)
AGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTC < SRR4302541.2873192/94‑1 (MQ=60)
AGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTC > SRR4302541.8107419/1‑94 (MQ=60)
AGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTC > SRR4302541.908950/1‑94 (MQ=60)
AGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTC > SRR4302541.3766575/1‑94 (MQ=60)
GCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCT < SRR4302541.2920756/94‑1 (MQ=60)
CTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTT > SRR4302541.3291146/1‑94 (MQ=60)
CTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTT > SRR4302541.8332302/1‑94 (MQ=60)
AATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCC > SRR4302541.7897535/1‑94 (MQ=60)
ATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCG < SRR4302541.8435362/94‑1 (MQ=60)
ATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCG < SRR4302541.1920965/94‑1 (MQ=60)
ATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCG < SRR4302541.4917180/94‑1 (MQ=60)
AATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGAC < SRR4302541.5691353/94‑1 (MQ=60)
tccgCGCTATGATTACCGGACCGGCAGTACTTTGCATTGCCAGCGCAACAAAGGCAATATTGGCACGAGGTTCATCTTCCAGCTCTTCCGACTT < SRR4302541.1766879/90‑1 (MQ=60)
TCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTT < SRR4302541.1766878/94‑1 (MQ=60)
ACATCGCTACGATTCCCCGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTT < SRR4302541.5953806/94‑1 (MQ=60)
CATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTG < SRR4302541.1368846/94‑1 (MQ=60)
CATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTG > SRR4302541.3447219/1‑94 (MQ=60)
ATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGC > SRR4302541.3862290/1‑94 (MQ=60)
CGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTT < SRR4302541.6302785/94‑1 (MQ=60)
GCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTT < SRR4302541.7741864/94‑1 (MQ=60)
GCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTT < SRR4302541.1059583/94‑1 (MQ=60)
GCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTT < SRR4302541.4359623/94‑1 (MQ=60)
GCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTT > SRR4302541.3167676/1‑94 (MQ=60)
GCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTT < SRR4302541.5932767/94‑1 (MQ=60)
CTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTT > SRR4302541.4438113/1‑94 (MQ=60)
CTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTT > SRR4302541.6466558/1‑94 (MQ=60)
CTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTT < SRR4302541.7650134/94‑1 (MQ=60)
TATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTC < SRR4302541.4129315/94‑1 (MQ=60)
ATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCG > SRR4302541.6177687/1‑94 (MQ=60)
ATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCG < SRR4302541.7777268/94‑1 (MQ=60)
ATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCG > SRR4302541.1428821/1‑94 (MQ=60)
TGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGC < SRR4302541.3060194/94‑1 (MQ=60)
GTTCCCGGACCGCCAGTACTGGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCT < SRR4302541.6742035/94‑1 (MQ=60)
ATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCT < SRR4302541.3297582/94‑1 (MQ=60)
|
AAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCT > NC_000913/1616439‑1616625
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
