Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,616,532 |
G→A |
T134I (ACC→ATC) |
ydeB ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,616,532 | 0 | G | A | 100.0%
| 792.9
/ NA
| 206 | T134I (ACC→ATC) | ydeB | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (101/105); total (101/105) |
Only 100 of 212 total aligned reads displayed.
AAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTC > NC_000913/1616442‑1616621
|
aaGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGAtt > 1:3078972/1‑93 (MQ=255)
aGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTc > 2:3215738/1‑93 (MQ=255)
gATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTcc < 1:5117857/93‑1 (MQ=255)
gATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTcc > 1:2298859/1‑93 (MQ=255)
aaTCAGCGGCGTCGCAACCATCAGTCCCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTcc < 1:4646538/92‑1 (MQ=255)
tCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCg < 1:3863431/93‑1 (MQ=255)
tCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCg > 1:1266790/1‑93 (MQ=255)
aGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGa > 1:2648028/1‑93 (MQ=255)
gcggcggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGAc > 2:4510398/1‑93 (MQ=255)
gcggcggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGAc < 1:3526297/93‑1 (MQ=255)
gcggcggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGAc < 1:3298574/93‑1 (MQ=255)
ggcggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCg > 1:5007943/1‑93 (MQ=255)
ggcggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCg > 1:3677838/1‑93 (MQ=255)
ggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCa > 1:103647/1‑93 (MQ=255)
ggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCa > 1:5265541/1‑93 (MQ=255)
cgcAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGt < 1:1789506/93‑1 (MQ=255)
cgcAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGt < 1:3621620/93‑1 (MQ=255)
aaCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACt > 1:198433/1‑93 (MQ=255)
aaCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACt > 2:4337084/1‑93 (MQ=255)
aaCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACt < 2:2289618/93‑1 (MQ=255)
aCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACtt > 1:6144807/1‑93 (MQ=255)
aCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACtt < 2:341026/93‑1 (MQ=255)
ccATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTg < 1:2582028/93‑1 (MQ=255)
aTCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGc < 1:973417/93‑1 (MQ=255)
tCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCa < 1:5103771/93‑1 (MQ=255)
aGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCAtt > 1:4873525/1‑93 (MQ=255)
gTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTg < 2:2106881/93‑1 (MQ=255)
aCCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGcc < 1:5546702/93‑1 (MQ=255)
aCCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGcc > 2:3036845/1‑93 (MQ=255)
aCCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGcc < 2:549098/93‑1 (MQ=255)
cccAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCa < 2:1961367/93‑1 (MQ=255)
ccAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAg < 1:5626440/93‑1 (MQ=255)
ccAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAg > 2:3367751/1‑93 (MQ=255)
aTCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCgg < 2:1525847/93‑1 (MQ=255)
tCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGc < 1:1950416/93‑1 (MQ=255)
cAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGca < 1:341480/93‑1 (MQ=255)
gCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGcaca > 2:4644737/1‑93 (MQ=255)
gCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGcaca > 2:4849203/1‑93 (MQ=255)
gCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGcaca > 1:3335266/1‑93 (MQ=255)
cGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACaa < 1:4271335/93‑1 (MQ=255)
gAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACaaa < 2:1858042/93‑1 (MQ=255)
gAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACaaa > 2:2949355/1‑93 (MQ=255)
ggTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGc < 2:2608039/93‑1 (MQ=255)
ggTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGc < 1:3707639/93‑1 (MQ=255)
ggTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGc < 1:1286004/93‑1 (MQ=255)
gTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCa < 1:4028856/93‑1 (MQ=255)
tGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAat < 2:5786553/93‑1 (MQ=255)
taaCTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAata < 1:4472768/92‑1 (MQ=255)
gAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAata > 1:3766576/1‑93 (MQ=255)
aCTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATAtt > 1:4716389/1‑93 (MQ=255)
aCTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATAtt > 2:1196836/1‑93 (MQ=255)
tctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTgg < 2:5876884/93‑1 (MQ=255)
gACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAc > 2:5005537/1‑93 (MQ=255)
gACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAc > 1:2919933/1‑93 (MQ=255)
gACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAc < 2:5692526/93‑1 (MQ=255)
gCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTgg > 1:360597/1‑93 (MQ=255)
gCACTGTGGACGCCGAGCTAATAATCATCGCTACGATTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTgg < 2:2645482/93‑1 (MQ=255)
cACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTggg > 2:5373975/1‑93 (MQ=255)
cTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGtt > 1:351970/1‑93 (MQ=255)
tgGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCAt > 2:2216889/1‑93 (MQ=255)
ggACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATc > 2:3642039/1‑93 (MQ=255)
gACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCt < 1:273810/93‑1 (MQ=255)
gACGCCGAGCTAATAAACATCGCTATGATTCCCGGCCCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCt < 2:5234844/93‑1 (MQ=255)
aCGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCtt < 2:1090168/93‑1 (MQ=255)
aCGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCtt < 2:1053151/93‑1 (MQ=255)
aCGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCtt < 1:4526410/93‑1 (MQ=255)
aCGCCGAGCTAATAATCATCGCTATGATCCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCCGTGGGTTCATCtt < 1:1236288/93‑1 (MQ=255)
cGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTc < 2:2901207/93‑1 (MQ=255)
gCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTcc < 2:5068004/93‑1 (MQ=255)
gCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTcc < 1:4252021/93‑1 (MQ=255)
ccGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCa < 2:4712619/93‑1 (MQ=255)
cGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAg > 1:4162061/1‑93 (MQ=255)
gAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGc < 2:3331683/93‑1 (MQ=255)
gAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGc < 2:4102367/93‑1 (MQ=255)
gAGCTAATAATCATCGCTATGATTCCCGGACCCGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGc > 2:6465181/1‑93 (MQ=255)
aGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGct < 2:6191227/93‑1 (MQ=255)
gCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGctc < 1:1638295/93‑1 (MQ=255)
gCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGctc < 2:6257247/93‑1 (MQ=255)
gCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGctc < 1:4372006/93‑1 (MQ=255)
gCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGctc < 2:73837/93‑1 (MQ=255)
taataaTCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCtt > 1:835455/1‑93 (MQ=255)
taataaTCATCGCTATGATGCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCtt < 1:785576/93‑1 (MQ=255)
aataatCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTc < 1:1545280/93‑1 (MQ=255)
ataatCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTcc < 2:3422212/93‑1 (MQ=255)
aatCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGa > 1:1398166/1‑93 (MQ=255)
atcatcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGAc > 1:5389441/1‑93 (MQ=255)
atcatcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGAc < 2:4690151/93‑1 (MQ=255)
atcatcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGAc > 1:5833703/1‑93 (MQ=255)
atcatcGCTATGATTCCCGGACCGGCAGAACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTGCAGCTCTTCCGAc > 2:521678/1‑93 (MQ=255)
tcatcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACt < 2:423263/93‑1 (MQ=255)
tcatcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACt < 2:6330664/93‑1 (MQ=255)
atcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTg > 2:880773/1‑93 (MQ=255)
atcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTg > 1:680901/1‑93 (MQ=255)
tcGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGc < 1:5929119/93‑1 (MQ=255)
gCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCtt > 2:2380689/1‑93 (MQ=255)
cTATGATTCCCGGACCGGCCGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCttt < 1:225945/93‑1 (MQ=255)
tATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCtttt > 2:5662917/1‑93 (MQ=255)
tATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCtttt > 1:2685123/1‑93 (MQ=255)
tATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCtttt < 1:3219431/93‑1 (MQ=255)
aTGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTc < 1:1742936/93‑1 (MQ=255)
|
AAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTC > NC_000913/1616442‑1616621
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCG > NC_000913/1616439‑1616622
|
AAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGA > SRR4302534.3242998/1‑94 (MQ=60)
AAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATT > SRR4302534.789561/1‑94 (MQ=60)
AAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATT > SRR4302534.3159862/1‑94 (MQ=60)
AAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTC > SRR4302534.1755245/1‑94 (MQ=60)
AGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCC > SRR4302534.2359877/1‑94 (MQ=60)
AGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCC > SRR4302534.4565573/1‑94 (MQ=60)
AGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCC < SRR4302534.486847/94‑1 (MQ=60)
GATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCC < SRR4302534.3994705/94‑1 (MQ=60)
GATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCC < SRR4302534.5256010/94‑1 (MQ=60)
AATCAGCGGCGTCGCAACCATCAGTCCCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCC < SRR4302534.4772666/94‑1 (MQ=60)
ATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCG > SRR4302534.1300150/1‑94 (MQ=60)
ATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCG > SRR4302534.4778498/1‑94 (MQ=60)
ATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCGATGATTCCCG > SRR4302534.3797710/1‑94 (MQ=60)
TCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGG < SRR4302534.3967168/94‑1 (MQ=60)
TCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGATGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGAATCCCGG > SRR4302534.188047/1‑94 (MQ=60)
CAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGA > SRR4302534.3554545/1‑94 (MQ=60)
CAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGA > SRR4302534.5768490/1‑94 (MQ=60)
CAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGA > SRR4302534.2718051/1‑94 (MQ=60)
GCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACC < SRR4302534.3386601/94‑1 (MQ=60)
GCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACC < SRR4302534.3621148/94‑1 (MQ=60)
GCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACC > SRR4302534.3933417/1‑94 (MQ=60)
GCGCCGGCGCAGCCATCAGTACCCAATCAGCGAAGGTGGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACC < SRR4302534.3621147/94‑1 (MQ=60)
CGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCG > SRR4302534.5143303/1‑94 (MQ=60)
CGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCG > SRR4302534.3776717/1‑94 (MQ=60)
GGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGG < SRR4302534.2776741/94‑1 (MQ=60)
TGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCA > SRR4302534.106418/1‑94 (MQ=60)
CGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCA > SRR4302534.5407794/1‑94 (MQ=60)
GGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAG > SRR4302534.2030315/1‑94 (MQ=60)
CGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTA > SRR4302534.5865549/1‑94 (MQ=60)
CGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTA < SRR4302534.3718986/94‑1 (MQ=60)
CGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTA < SRR4302534.1835982/94‑1 (MQ=60)
CAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACT > SRR4302534.203643/1‑94 (MQ=60)
CAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACT < SRR4302534.1936179/94‑1 (MQ=60)
AACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTT > SRR4302534.2673508/1‑94 (MQ=60)
AACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTT > SRR4302534.3851845/1‑94 (MQ=60)
AACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTT > SRR4302534.6311912/1‑94 (MQ=60)
CCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGG < SRR4302534.2650396/94‑1 (MQ=60)
CCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGG < SRR4302534.3097007/94‑1 (MQ=60)
CCATCACTACCCACTCAGCGAAGGTTGATCTCTGGCGCACTGTGGACGCCGAGCTAATAATCACCGCTATCATTCCCGGACCGGCAGTACTTGG < SRR4302534.2494027/94‑1 (MQ=60)
CATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGCACTTGGC > SRR4302534.4179925/1‑94 (MQ=60)
ATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACTCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCA < SRR4302534.1093341/94‑1 (MQ=60)
ATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCA < SRR4302534.998222/94‑1 (MQ=60)
ATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCA > SRR4302534.2721085/1‑94 (MQ=60)
TCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCAT < SRR4302534.5241518/94‑1 (MQ=60)
CAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATT > SRR4302534.6155429/1‑94 (MQ=60)
CAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATT > SRR4302534.5005709/1‑94 (MQ=60)
CAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATT < SRR4302534.3637707/94‑1 (MQ=60)
TACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCC < SRR4302534.6281828/94‑1 (MQ=60)
ACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCG > SRR4302534.2337026/1‑94 (MQ=60)
ACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCA < SRR4302534.5696425/94‑1 (MQ=60)
cccaatcagcggagggtcagccctggcccaatggggaaggCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAG < SRR4302534.223734/54‑1 (MQ=60)
CCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAG < SRR4302534.4386420/94‑1 (MQ=60)
CCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAG < SRR4302534.4364789/94‑1 (MQ=60)
CCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGC < SRR4302534.5778707/94‑1 (MQ=60)
CCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGC > SRR4302534.3421542/1‑94 (MQ=60)
CAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCG < SRR4302534.4378011/94‑1 (MQ=60)
TCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCA < SRR4302534.2001461/94‑1 (MQ=60)
CAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCAC < SRR4302534.350213/94‑1 (MQ=60)
AGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACA > SRR4302534.3424506/1‑94 (MQ=60)
CGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAA < SRR4302534.4386811/94‑1 (MQ=60)
GAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAG > SRR4302534.5423178/1‑94 (MQ=60)
GAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAG > SRR4302534.4404081/1‑94 (MQ=60)
GAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAG > SRR4302534.6072520/1‑94 (MQ=60)
AGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGC > SRR4302534.461949/1‑94 (MQ=60)
GGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCA < SRR4302534.1319868/94‑1 (MQ=60)
GGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCA < SRR4302534.1516465/94‑1 (MQ=60)
GGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCA < SRR4302534.3807308/94‑1 (MQ=60)
GTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAA < SRR4302534.4136870/94‑1 (MQ=60)
TGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATA > SRR4302534.3867699/1‑94 (MQ=60)
TGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATA > SRR4302534.1629799/1‑94 (MQ=60)
gaccccttaatcacgttggactgcgatgTAATAATCATCGCTAGGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATAT < SRR4302534.643462/66‑1 (MQ=60)
TAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATAT < SRR4302534.4593761/94‑1 (MQ=60)
AACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATT > SRR4302534.4844462/1‑94 (MQ=60)
AACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATT > SRR4302534.3348724/1‑94 (MQ=60)
TCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGC < SRR4302534.1800592/94‑1 (MQ=60)
CTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCA < SRR4302534.3728995/94‑1 (MQ=60)
TGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAC > SRR4302534.2996555/1‑94 (MQ=60)
TGACGCACTGTGGACGCCGAGCTAACAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAC > SRR4302534.289651/1‑94 (MQ=60)
CGCACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGG > SRR4302534.369793/1‑94 (MQ=60)
CACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGT < SRR4302534.5230945/94‑1 (MQ=60)
CACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGT < SRR4302534.997614/94‑1 (MQ=60)
ACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTT > SRR4302534.360980/1‑94 (MQ=60)
ACTGTGGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGCCACTGGGTT < SRR4302534.6452024/94‑1 (MQ=60)
GGACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCT < SRR4302534.3238800/94‑1 (MQ=60)
GACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTT < SRR4302534.280891/94‑1 (MQ=60)
ACGCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTC < SRR4302534.4649035/94‑1 (MQ=60)
ACGCCGAGCTAATAATCATCGCTATGATCCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCCGTGGGTTCATCTTC < SRR4302534.1268872/94‑1 (MQ=60)
GCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCA < SRR4302534.1914414/94‑1 (MQ=60)
GCCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCA < SRR4302534.4366740/94‑1 (MQ=60)
CCGAGCTAATAATGATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAG > SRR4302534.5290028/1‑94 (MQ=60)
CCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAG > SRR4302534.4274472/1‑94 (MQ=60)
CCGAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAG < SRR4302534.504107/94‑1 (MQ=60)
GAGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCT < SRR4302534.5249498/94‑1 (MQ=60)
AGCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTC > SRR4302534.4755339/1‑94 (MQ=60)
GCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCT < SRR4302534.1681025/94‑1 (MQ=60)
GCTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCT < SRR4302534.4489822/94‑1 (MQ=60)
CTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTT > SRR4302534.3660102/1‑94 (MQ=60)
CTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTT < SRR4302534.2927930/94‑1 (MQ=60)
CTAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTT > SRR4302534.856489/1‑94 (MQ=60)
TAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTC > SRR4302534.1390586/1‑94 (MQ=60)
TAATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTC < SRR4302534.5647539/94‑1 (MQ=60)
TAATAATCATCGCTATGATGCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTC < SRR4302534.805218/94‑1 (MQ=60)
AATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCC < SRR4302534.1585777/94‑1 (MQ=60)
AATAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCC < SRR4302534.12873/94‑1 (MQ=60)
TAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGA > SRR4302534.1434950/1‑94 (MQ=60)
TAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGA < SRR4302534.3711660/94‑1 (MQ=60)
TAATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGA > SRR4302534.1302224/1‑94 (MQ=60)
AATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGAC > SRR4302534.5992069/1‑94 (MQ=60)
AATCATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGAC > SRR4302534.5534587/1‑94 (MQ=60)
CATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTG > SRR4302534.697530/1‑94 (MQ=60)
CATCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTG < SRR4302534.5214535/94‑1 (MQ=60)
TCGCTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCT < SRR4302534.6090134/94‑1 (MQ=60)
CTATGATTCCCGGACCGGCCGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTT < SRR4302534.231843/94‑1 (MQ=60)
CTATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTT > SRR4302534.2756094/1‑94 (MQ=60)
TATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTC > SRR4302534.3490756/1‑94 (MQ=60)
TATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTC < SRR4302534.3304900/94‑1 (MQ=60)
ATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCG < SRR4302534.810181/94‑1 (MQ=60)
ATGATTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCG < SRR4302534.1788174/94‑1 (MQ=60)
|
AAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCG > NC_000913/1616439‑1616622
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
