Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,608,034 |
A→G |
V224A (GTG→GCG) |
uxaB ← |
altronate oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,608,034 | 0 | A | G | 100.0%
| 886.0
/ NA
| 250 | V224A (GTG→GCG) | uxaB | altronate oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (131/119); total (131/119) |
Only 100 of 255 total aligned reads displayed.
GATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCT > NC_000913/1607944‑1608123
|
aTTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCtt > 2:6292975/1‑93 (MQ=255)
aTTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCtt < 1:261978/93‑1 (MQ=255)
tttCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTc < 2:5135757/93‑1 (MQ=255)
ttCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCa > 1:6137710/1‑93 (MQ=255)
cGGTCCCTGAATCACAAACAGGTAAAAGTGTTCATCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATc < 2:6105813/93‑1 (MQ=255)
gTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATcgc < 1:3853025/93‑1 (MQ=255)
gTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATcgc > 1:3093109/1‑93 (MQ=255)
ccTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATcgcgcg > 2:227926/1‑93 (MQ=255)
tGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGa > 2:3775569/1‑93 (MQ=255)
gAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGAt > 2:929426/1‑93 (MQ=255)
aaTCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATa > 1:3013998/1‑93 (MQ=255)
acaAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCg > 2:1872060/1‑93 (MQ=255)
acaAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCg > 1:5695538/1‑93 (MQ=255)
caAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCgg > 1:6457602/1‑93 (MQ=255)
caAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCgg > 2:6394903/1‑93 (MQ=255)
caAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCgg > 1:4149225/1‑93 (MQ=255)
aaaCAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGt > 1:2870009/1‑93 (MQ=255)
aaCAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTa > 2:462384/1‑93 (MQ=255)
aaCAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTa > 2:3830836/1‑93 (MQ=255)
aCAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTaa < 1:1012599/93‑1 (MQ=255)
aGGTAAAATTGTTCAGCGGGGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACg > 1:6323625/1‑93 (MQ=255)
aGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACg > 1:2126269/1‑93 (MQ=255)
aGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACg > 2:1681457/1‑93 (MQ=255)
ggTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGa > 2:5364447/1‑93 (MQ=255)
gTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGAt < 2:3123125/93‑1 (MQ=255)
aaaaGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAATCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATAc < 1:555868/93‑1 (MQ=255)
aaaaGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATAc < 2:3486297/93‑1 (MQ=255)
aaaaGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATAc > 2:5764979/1‑93 (MQ=255)
aaaaGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATAc < 1:548036/93‑1 (MQ=255)
aaaGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACg > 2:3235987/1‑93 (MQ=255)
aaaGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACg > 1:4553009/1‑93 (MQ=255)
aaaGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACg > 1:4498910/1‑93 (MQ=255)
aaaGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACg < 2:3607338/93‑1 (MQ=255)
aaGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACgg > 1:2768280/1‑93 (MQ=255)
aaGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACgg > 2:1496315/1‑93 (MQ=255)
aGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGt > 2:217621/1‑93 (MQ=255)
aGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGt > 2:5917662/1‑93 (MQ=255)
aGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGt > 1:2227486/1‑93 (MQ=255)
aGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGAGGATAACCGGTAACGATACggc > 2:1998855/1‑92 (MQ=255)
aGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTGCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGt < 2:5860899/93‑1 (MQ=255)
gtgtTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTc > 2:2357930/1‑93 (MQ=255)
gtgtTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTc < 2:4772055/93‑1 (MQ=255)
tgtTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTcc > 1:2497098/1‑93 (MQ=255)
ttCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTccac < 2:5249848/93‑1 (MQ=255)
ttCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTccaa > 2:1843312/1‑92 (MQ=255)
cAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTccacca < 2:5668367/93‑1 (MQ=255)
aGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTGATCGCGCGGATAACCGGTAACGATACGGTccacaac > 2:1590744/1‑90 (MQ=255)
gCGGTGTCGAGAAAACCATCGTGATAACCCGGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGc > 2:705329/1‑93 (MQ=255)
gCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGc < 2:2781801/93‑1 (MQ=255)
ggTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGt < 2:3370427/93‑1 (MQ=255)
gtgtCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTa > 1:1052614/1‑93 (MQ=255)
cGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAAc < 2:2521680/93‑1 (MQ=255)
gagaAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACa > 2:3176050/1‑93 (MQ=255)
agaAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAg > 2:726514/1‑93 (MQ=255)
agaAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAg > 1:4192531/1‑93 (MQ=255)
aaaaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGaa > 2:1461625/1‑93 (MQ=255)
aaaaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGaa < 2:623132/93‑1 (MQ=255)
aaaaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCAGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGaa < 2:1702121/93‑1 (MQ=255)
aaaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAg > 2:1013608/1‑93 (MQ=255)
aaaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAg < 1:17135/93‑1 (MQ=255)
aaaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAg < 2:4958522/93‑1 (MQ=255)
aaaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAg > 1:3876/1‑93 (MQ=255)
aaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGc < 2:1432446/93‑1 (MQ=255)
aCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCt < 1:5316478/93‑1 (MQ=255)
aCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCt > 1:159604/1‑93 (MQ=255)
aCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCt < 1:2054871/93‑1 (MQ=255)
aCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCt > 1:4857837/1‑93 (MQ=255)
ccATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTg < 1:6469868/93‑1 (MQ=255)
ccATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTg < 1:6343315/93‑1 (MQ=255)
ccATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTg > 2:4457839/1‑93 (MQ=255)
cATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGt < 2:4215596/93‑1 (MQ=255)
cATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGt < 1:1528634/93‑1 (MQ=255)
aTCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGtt > 1:3418614/1‑93 (MQ=255)
gTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGc > 2:1079177/1‑93 (MQ=255)
tGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGcc < 1:1195144/93‑1 (MQ=255)
gATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCt > 2:4376973/1‑93 (MQ=255)
gATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCt < 1:2547815/93‑1 (MQ=255)
aaCCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGAt < 2:5398727/93‑1 (MQ=255)
aaCCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGAt < 1:3647477/93‑1 (MQ=255)
cccAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATcc < 2:5621935/93‑1 (MQ=255)
cAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAg > 2:1315239/1‑93 (MQ=255)
cAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAg > 2:4721454/1‑93 (MQ=255)
cAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAg > 2:5822669/1‑93 (MQ=255)
aGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGc < 1:283054/93‑1 (MQ=255)
gTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGcc > 2:2686789/1‑93 (MQ=255)
gTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGcc < 2:4103430/93‑1 (MQ=255)
tcttcttcCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCAt < 1:3292280/93‑1 (MQ=255)
cttcttcCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCAtt < 1:1896657/93‑1 (MQ=255)
cttcCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGaa > 1:1317290/1‑93 (MQ=255)
tcCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATa < 2:4006595/93‑1 (MQ=255)
ccAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATaa > 1:3622612/1‑93 (MQ=255)
cAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATaaa < 1:3529391/93‑1 (MQ=255)
cAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATaaa < 1:1724451/93‑1 (MQ=255)
cAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATaaa < 1:1682458/93‑1 (MQ=255)
tttAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGc < 1:3796795/93‑1 (MQ=255)
ttAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCt < 2:2990210/93‑1 (MQ=255)
tAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCtt < 2:503632/93‑1 (MQ=255)
aGCCGCTTCATCGCGCGGATAACCGGTAAGGATACGGTCCACCAGCGTAGAACAGAAGCTGTTTGCCTGATCCAGCCATTGAATAAATGCTTc > 2:687349/1‑93 (MQ=255)
aGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTc < 2:3015760/93‑1 (MQ=255)
gCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCt > 1:5880384/1‑93 (MQ=255)
|
GATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCT > NC_000913/1607944‑1608123
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCA > NC_000913/1607943‑1608127
|
GGATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCT < SRR4302534.4293262/94‑1 (MQ=60)
GATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTT < SRR4302534.1866341/94‑1 (MQ=60)
GATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTT > SRR4302534.2080127/1‑94 (MQ=60)
ATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTC < SRR4302534.268778/94‑1 (MQ=60)
TTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCA > SRR4302534.6519122/1‑94 (MQ=60)
TTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCA > SRR4302534.6304656/1‑94 (MQ=60)
TCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATC > SRR4302534.90051/1‑94 (MQ=60)
TCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATC > SRR4302534.4194968/1‑94 (MQ=60)
CGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCG < SRR4302534.3963786/94‑1 (MQ=60)
GGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGC > SRR4302534.3174473/1‑94 (MQ=60)
GGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGC > SRR4302534.3174472/1‑94 (MQ=60)
GGTCCCTGAATCACAAACAGGAAAAATTGGTCAGCGGTGTCGAGAAAAACATCGTGATAACCCAGTTCTTCTTCCCGTTTAGCCGCTTCATCGC > SRR4302534.3174471/1‑94 (MQ=60)
GTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCG < SRR4302534.3956470/94‑1 (MQ=60)
TCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGC > SRR4302534.173826/1‑94 (MQ=60)
CCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCG > SRR4302534.284903/1‑94 (MQ=60)
GAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATA > SRR4302534.3092884/1‑94 (MQ=60)
AATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAA > SRR4302534.5246729/1‑94 (MQ=60)
ATCACAAACAGGTAAAAGTGTTCAGCGGGGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAAC > SRR4302534.3653191/1‑94 (MQ=60)
TCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACC < SRR4302534.1759302/94‑1 (MQ=60)
CACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCG > SRR4302534.4263786/1‑94 (MQ=60)
CACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCG > SRR4302534.5849829/1‑94 (MQ=60)
ACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGG > SRR4302534.4261229/1‑94 (MQ=60)
ACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGG > SRR4302534.6631570/1‑94 (MQ=60)
CAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGT > SRR4302534.2945371/1‑94 (MQ=60)
AACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAA < SRR4302534.4287342/94‑1 (MQ=60)
AACAGGTAAAAGTGCTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATAGCGCGGATAACCGGCAA > SRR4302534.6185200/1‑94 (MQ=60)
ACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAAC < SRR4302534.1038654/94‑1 (MQ=60)
CAGGTAAAATTGTTCAGCGGGGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACG > SRR4302534.6494482/1‑94 (MQ=60)
CAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACG > SRR4302534.2182261/1‑94 (MQ=60)
GGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTACCGAT < SRR4302534.6129621/94‑1 (MQ=60)
TAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATAC < SRR4302534.1256898/94‑1 (MQ=60)
AAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAATCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACG < SRR4302534.569572/94‑1 (MQ=60)
AAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACG < SRR4302534.561558/94‑1 (MQ=60)
AAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACG > SRR4302534.4620679/1‑94 (MQ=60)
AAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACG > SRR4302534.4676428/1‑94 (MQ=60)
AAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGATCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTTACGATACG > SRR4302534.4889531/1‑94 (MQ=60)
AAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGG < SRR4302534.4804698/94‑1 (MQ=60)
AAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGG > SRR4302534.2841142/1‑94 (MQ=60)
AAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGT < SRR4302534.2154932/94‑1 (MQ=60)
AAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGT > SRR4302534.2286483/1‑94 (MQ=60)
AGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTC > SRR4302534.2966128/1‑94 (MQ=60)
GTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCC > SRR4302534.2563417/1‑94 (MQ=60)
TGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCA < SRR4302534.2435440/94‑1 (MQ=60)
GTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCAC < SRR4302534.2188922/94‑1 (MQ=60)
TTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACA < SRR4302534.5782395/94‑1 (MQ=60)
TCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCA > SRR4302534.2617907/1‑94 (MQ=60)
TCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCA > SRR4302534.1186636/1‑94 (MQ=60)
CAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAG < SRR4302534.1657853/94‑1 (MQ=60)
CGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGT < SRR4302534.3846253/94‑1 (MQ=60)
CGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGT > SRR4302534.5741450/1‑94 (MQ=60)
GGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTA > SRR4302534.1079860/1‑94 (MQ=60)
GGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTA < SRR4302534.3962690/94‑1 (MQ=60)
GTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAG < SRR4302534.656521/94‑1 (MQ=60)
CGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACA < SRR4302534.4544262/94‑1 (MQ=60)
CGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACA > SRR4302534.3486840/1‑94 (MQ=60)
GAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAG > SRR4302534.4305792/1‑94 (MQ=60)
AAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAG > SRR4302534.3988/1‑94 (MQ=60)
AAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGC > SRR4302534.1486260/1‑94 (MQ=60)
AAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGC < SRR4302534.17590/94‑1 (MQ=60)
AACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCT > SRR4302534.4989636/1‑94 (MQ=60)
AACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCT > SRR4302534.369285/1‑94 (MQ=60)
AACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCT > SRR4302534.1634580/1‑94 (MQ=60)
AACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCT > SRR4302534.163778/1‑94 (MQ=60)
ACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTG < SRR4302534.5459892/94‑1 (MQ=60)
ACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTG < SRR4302534.2108556/94‑1 (MQ=60)
ACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTG < SRR4302534.6446475/94‑1 (MQ=60)
CCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGT < SRR4302534.6514631/94‑1 (MQ=60)
CCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGT < SRR4302534.6644137/94‑1 (MQ=60)
CATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTT > SRR4302534.3510468/1‑94 (MQ=60)
CATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTT < SRR4302534.1568751/94‑1 (MQ=60)
CATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTT > SRR4302534.1169708/1‑94 (MQ=60)
ATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTA < SRR4302534.546149/94‑1 (MQ=60)
ATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTA < SRR4302534.1074503/94‑1 (MQ=60)
ATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTA < SRR4302534.1465848/94‑1 (MQ=60)
TCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAG < SRR4302534.6378452/94‑1 (MQ=60)
GTGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCC > SRR4302534.5599971/1‑94 (MQ=60)
TGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCT < SRR4302534.1763393/94‑1 (MQ=60)
TGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCT < SRR4302534.5668524/94‑1 (MQ=60)
TGATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCT < SRR4302534.1226588/94‑1 (MQ=60)
GATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTG < SRR4302534.2615373/94‑1 (MQ=60)
ATAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGA < SRR4302534.3211286/94‑1 (MQ=60)
TAACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGAT > SRR4302534.882120/1‑94 (MQ=60)
TAACCCAGTTCTTCTTCCAGGTTAGCCGCTTCATCGCGCGGATAACCGGGAACGAGACGGTCCACCAGCGTAGAACAGAAGCTGTTAGtacgac > SRR4302534.789379/1‑88 (MQ=60)
AACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATC < SRR4302534.3745483/94‑1 (MQ=60)
AACCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATC > SRR4302534.648009/1‑94 (MQ=60)
CCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCA < SRR4302534.2170180/94‑1 (MQ=60)
CCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCA > SRR4302534.256639/1‑94 (MQ=60)
CCCAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGGCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCA < SRR4302534.2670899/94‑1 (MQ=60)
CAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGC > SRR4302534.2058215/1‑94 (MQ=60)
CAGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGC > SRR4302534.3087915/1‑94 (MQ=60)
AGTTCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCC < SRR4302534.290365/94‑1 (MQ=60)
TCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATT > SRR4302534.3841262/1‑94 (MQ=60)
TCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATT < SRR4302534.3380071/94‑1 (MQ=60)
TCTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATT > SRR4302534.5980043/1‑94 (MQ=60)
CTTCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTG < SRR4302534.1946120/94‑1 (MQ=60)
TCTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAA > SRR4302534.1352027/1‑94 (MQ=60)
CTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAAT < SRR4302534.6633842/94‑1 (MQ=60)
CTTCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGAGCCAGCCATTGAAT < SRR4302534.4195015/94‑1 (MQ=60)
TGCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGTCTGATCCAGCCATTGAATA < SRR4302534.1686750/94‑1 (MQ=60)
TCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAA < SRR4302534.2917807/94‑1 (MQ=60)
TCCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAA > SRR4302534.3720003/1‑94 (MQ=60)
CCAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAA > SRR4302534.3912004/1‑94 (MQ=60)
CAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAAT < SRR4302534.1769239/94‑1 (MQ=60)
CAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAAT < SRR4302534.1726218/94‑1 (MQ=60)
CAGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAAT < SRR4302534.3624318/94‑1 (MQ=60)
AGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATG < SRR4302534.2891615/94‑1 (MQ=60)
AGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATG > SRR4302534.4515622/1‑94 (MQ=60)
AGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATG > SRR4302534.2483503/1‑94 (MQ=60)
AGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATG > SRR4302534.4667353/1‑94 (MQ=60)
AGTTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATG > SRR4302534.3557596/1‑94 (MQ=60)
TTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCT < SRR4302534.3898737/94‑1 (MQ=60)
TTTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCT < SRR4302534.3405732/94‑1 (MQ=60)
TTAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTT < SRR4302534.2772796/94‑1 (MQ=60)
TAGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTC < SRR4302534.3740584/94‑1 (MQ=60)
AGCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCT > SRR4302534.6040044/1‑94 (MQ=60)
GCCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTG > SRR4302534.1340840/1‑94 (MQ=60)
CCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGG < SRR4302534.6317615/94‑1 (MQ=60)
CCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGG > SRR4302534.2802706/1‑94 (MQ=60)
CCGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGG > SRR4302534.4180744/1‑94 (MQ=60)
CCGCTGCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGG < SRR4302534.3789112/94‑1 (MQ=60)
CGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGC > SRR4302534.4430079/1‑94 (MQ=60)
CGCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGC > SRR4302534.3939894/1‑94 (MQ=60)
GCTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCA < SRR4302534.4635378/94‑1 (MQ=60)
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GGATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTCAGCGGTGTCGAGAAAACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCA > NC_000913/1607943‑1608127
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
