Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,672,529 |
T→C |
V198A (GTG→GCG) |
b1601 → |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,672,529 | 0 | T | C | 99.5%
| 628.5
/ ‑4.4
| 182 | V198A (GTG→GCG) | b1601 | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (97/84); total (97/85) |
| Fisher's exact test for biased strand distribution p-value = 4.67e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.76e-01 |
Only 100 of 191 total aligned reads displayed.
TGCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAT > NC_000913/1672439‑1672618
|
tGCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGgcgc > 1:4835132/1‑93 (MQ=255)
gCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCt < 2:5667368/93‑1 (MQ=255)
gCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCt > 2:2267653/1‑93 (MQ=255)
gCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCt > 2:6214811/1‑93 (MQ=255)
ggAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGaaa > 2:3391534/1‑93 (MQ=255)
ggAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGaaa > 2:6203102/1‑93 (MQ=255)
aaaaTTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGaaaaa > 1:5443594/1‑92 (MQ=255)
aaaTTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACa > 2:5839478/1‑93 (MQ=255)
aTTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGc > 1:1442693/1‑93 (MQ=255)
aTTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGc > 2:341387/1‑93 (MQ=255)
aTTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGc < 2:5796574/93‑1 (MQ=255)
tCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCAt < 1:3081476/93‑1 (MQ=255)
tCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCAt > 2:2814362/1‑93 (MQ=255)
cAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATc > 1:2993698/1‑93 (MQ=255)
aGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCa < 2:4871614/93‑1 (MQ=255)
gCAAATGATGGCGCGTCGGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAg < 2:1748270/93‑1 (MQ=255)
gCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAg < 2:5597657/93‑1 (MQ=255)
gCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAg < 2:3827977/93‑1 (MQ=255)
cAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGc < 2:3334680/93‑1 (MQ=255)
atgatgGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGcatc > 2:4792548/1‑93 (MQ=255)
atgatgGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGcatc > 1:5545459/1‑93 (MQ=255)
tgatgGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGcatca < 2:3822490/93‑1 (MQ=255)
gatgGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGcatcat < 2:4410018/93‑1 (MQ=255)
gatgGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGcatcat < 2:2991124/93‑1 (MQ=255)
atgGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCatcatc < 2:677207/93‑1 (MQ=255)
tgGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCAtcatca > 2:5075977/1‑93 (MQ=255)
tgGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCACATTATCTGGCGCTGAAAACAGCCATCAGCAtcatca < 2:211201/93‑1 (MQ=255)
ggCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCAc > 2:3990042/1‑93 (MQ=255)
gcgcGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCAcc < 1:3500030/93‑1 (MQ=255)
cgcgTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCg < 2:4641523/93‑1 (MQ=255)
gcgTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCgg < 2:421302/93‑1 (MQ=255)
cgTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGc > 2:6265398/1‑93 (MQ=255)
cgTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGc < 1:5171486/93‑1 (MQ=255)
cgTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGc < 1:3092108/93‑1 (MQ=255)
ttCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGcc < 2:5283001/92‑1 (MQ=255)
gTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGcc < 1:887171/93‑1 (MQ=255)
tCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCt < 1:4895724/93‑1 (MQ=255)
tCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCt > 1:221936/1‑93 (MQ=255)
cGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTgg > 2:817726/1‑93 (MQ=255)
gTTGAAGGGATGGCGGCGATTCAACGGGGGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTc < 1:5333962/93‑1 (MQ=255)
ttGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCg > 1:4783175/1‑93 (MQ=255)
tGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGc > 1:3775318/1‑93 (MQ=255)
gAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGcc > 2:2936400/1‑93 (MQ=255)
gAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGcc < 1:322397/93‑1 (MQ=255)
gAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGcc < 2:2392193/93‑1 (MQ=255)
aaGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCt > 1:2710802/1‑93 (MQ=255)
aGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTg < 1:4794309/93‑1 (MQ=255)
aGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTg < 1:6031571/93‑1 (MQ=255)
aGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTg < 1:6071805/93‑1 (MQ=255)
aGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTg < 2:5943172/93‑1 (MQ=255)
ggATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTggg < 2:2082371/93‑1 (MQ=255)
aTGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCg > 1:4318135/1‑93 (MQ=255)
gcggcgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATg > 2:1614416/1‑93 (MQ=255)
gcggcgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATg > 2:2021916/1‑93 (MQ=255)
cggcgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGc > 1:1095458/1‑93 (MQ=255)
ggcgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCt < 1:3735217/93‑1 (MQ=255)
ggcgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCt < 1:599514/93‑1 (MQ=255)
cgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTcg > 2:3799851/1‑93 (MQ=255)
aTTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTcgcc > 1:408116/1‑93 (MQ=255)
aTTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTcgcc < 1:1168704/93‑1 (MQ=255)
ttCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTcgccg > 1:3951092/1‑93 (MQ=255)
ttCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTcgccg > 2:3905993/1‑93 (MQ=255)
aCGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACt > 2:1544142/1‑93 (MQ=255)
aCGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACt < 2:213890/93‑1 (MQ=255)
aCGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACt < 1:1579709/93‑1 (MQ=255)
aCGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACt > 1:6206873/1‑93 (MQ=255)
aCGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACt > 1:5925561/1‑93 (MQ=255)
gCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGAt < 2:2275615/93‑1 (MQ=255)
gCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGAt < 1:200869/93‑1 (MQ=255)
gATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGt < 1:4591725/93‑1 (MQ=255)
aTTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGtt < 2:3677811/93‑1 (MQ=255)
ttGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttc < 2:709620/93‑1 (MQ=255)
ttGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttc < 1:10622/93‑1 (MQ=255)
ttGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttc > 2:1130051/1‑93 (MQ=255)
ttGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttc > 1:1941290/1‑93 (MQ=255)
gACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgc > 2:5200886/1‑93 (MQ=255)
cAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgctt < 1:5317000/93‑1 (MQ=255)
cAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgctt < 2:5905606/93‑1 (MQ=255)
cAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgctt > 1:3391661/1‑93 (MQ=255)
aGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttc < 1:3584467/93‑1 (MQ=255)
aGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttc < 1:2311503/93‑1 (MQ=255)
gtgtTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttcg > 1:5404911/1‑93 (MQ=255)
gtgtTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttcg > 1:1286661/1‑93 (MQ=255)
gtTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTtcgcttcgct > 2:4295092/1‑93 (MQ=255)
gtTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTtcgcttcgct > 2:1704825/1‑93 (MQ=255)
gtTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTtcgcttcgct > 1:622242/1‑93 (MQ=255)
tttCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTcgcttcgctt < 2:3569823/93‑1 (MQ=255)
ttCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCttt > 2:2446896/1‑93 (MQ=255)
ttCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCttt < 2:4955157/93‑1 (MQ=255)
tctcATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCtttt < 1:69077/93‑1 (MQ=255)
cATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTc > 1:3290938/1‑93 (MQ=255)
ttATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTg > 2:873177/1‑93 (MQ=255)
ttATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTg < 1:965788/93‑1 (MQ=255)
ttATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTg < 1:283710/93‑1 (MQ=255)
ttATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTg < 1:6145601/93‑1 (MQ=255)
tATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTgg < 1:1364037/93‑1 (MQ=255)
tATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTgg > 1:595996/1‑93 (MQ=255)
aTCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTggg < 1:2884914/93‑1 (MQ=255)
aTCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTggg > 2:4485126/1‑93 (MQ=255)
tCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTgggg > 2:5487970/1‑93 (MQ=255)
|
TGCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAT > NC_000913/1672439‑1672618
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTGCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCT > NC_000913/1672437‑1672622
|
ATTGCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCG < SRR4302534.2137742/94‑1 (MQ=60)
ATTGCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGGTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGAG > SRR4302534.4782489/1‑94 (MQ=60)
TTGCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGC > SRR4302534.4966317/1‑94 (MQ=60)
GCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTG > SRR4302534.6142219/1‑94 (MQ=60)
CGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAA > SRR4302534.582938/1‑94 (MQ=60)
GAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAAA > SRR4302534.5590241/1‑94 (MQ=60)
AAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACA > SRR4302534.6215041/1‑94 (MQ=60)
AAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAG < SRR4302534.2934735/94‑1 (MQ=60)
AATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGC > SRR4302534.1480666/1‑94 (MQ=60)
AATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGAGTTTCTCATTATCTGGCGCTGAAAACAGC > SRR4302534.4943306/1‑94 (MQ=60)
ATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCC < SRR4302534.957442/94‑1 (MQ=60)
TCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATC < SRR4302534.908404/94‑1 (MQ=60)
TCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATC > SRR4302534.4168317/1‑94 (MQ=60)
TCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATC < SRR4302534.3162440/94‑1 (MQ=60)
TCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATC > SRR4302534.3071933/1‑94 (MQ=60)
AATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATC > SRR4302534.5695152/1‑94 (MQ=60)
ATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCA < SRR4302534.4849482/94‑1 (MQ=60)
GGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTTTCTGGCGCTGAAAAAAGCCATCAGCATCATCACC > SRR4302534.3975939/1‑94 (MQ=60)
GGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACC > SRR4302534.6638574/1‑94 (MQ=60)
GCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCG < SRR4302534.3594151/94‑1 (MQ=60)
CGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGG > SRR4302534.3025326/1‑94 (MQ=60)
GCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGC < SRR4302534.5557449/94‑1 (MQ=60)
CGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCC < SRR4302534.3173432/94‑1 (MQ=60)
CGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCC < SRR4302534.5310876/94‑1 (MQ=60)
GTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCT > SRR4302534.227746/1‑94 (MQ=60)
GTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCT < SRR4302534.909636/94‑1 (MQ=60)
GTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATAACCGGCCT > SRR4302534.5527544/1‑94 (MQ=60)
TCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTG < SRR4302534.5028456/94‑1 (MQ=60)
TCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTG > SRR4302534.544319/1‑94 (MQ=60)
GTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCG > SRR4302534.4913069/1‑94 (MQ=60)
GTTGAAGGGATGGCGGCGATTCAACGGGGGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCG < SRR4302534.5477806/94‑1 (MQ=60)
TTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGC > SRR4302534.3876686/1‑94 (MQ=60)
TGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCC > SRR4302534.3280961/1‑94 (MQ=60)
GAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCT > SRR4302534.2782378/1‑94 (MQ=60)
GAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCT < SRR4302534.330684/94‑1 (MQ=60)
GAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCT > SRR4302534.1458525/1‑94 (MQ=60)
AGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGG < SRR4302534.4924480/94‑1 (MQ=60)
AGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGG < SRR4302534.6195472/94‑1 (MQ=60)
AGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGG > SRR4302534.3529676/1‑94 (MQ=60)
AGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGG < SRR4302534.6236889/94‑1 (MQ=60)
GATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCG > SRR4302534.4990645/1‑94 (MQ=60)
GATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCG > SRR4302534.4435047/1‑94 (MQ=60)
TGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGAT < SRR4302534.5649747/94‑1 (MQ=60)
GCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGC > SRR4302534.1123956/1‑94 (MQ=60)
GGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTC < SRR4302534.3835560/94‑1 (MQ=60)
GGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTC < SRR4302534.614132/94‑1 (MQ=60)
CGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGC > SRR4302534.2314524/1‑94 (MQ=60)
GATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCC > SRR4302534.418547/1‑94 (MQ=60)
ATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCG > SRR4302534.4056865/1‑94 (MQ=60)
ATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCG < SRR4302534.1199401/94‑1 (MQ=60)
TCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCA > SRR4302534.1273059/1‑94 (MQ=60)
AACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACT < SRR4302534.3754944/94‑1 (MQ=60)
AACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACT > SRR4302534.6375624/1‑94 (MQ=60)
AACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACT > SRR4302534.6086460/1‑94 (MQ=60)
AACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACT < SRR4302534.6185123/94‑1 (MQ=60)
ACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTC < SRR4302534.1684707/94‑1 (MQ=60)
ACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTC < SRR4302534.1621032/94‑1 (MQ=60)
TGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGAT > SRR4302534.4455939/1‑94 (MQ=60)
GCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATG < SRR4302534.2148592/94‑1 (MQ=60)
GCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATG < SRR4302534.206139/94‑1 (MQ=60)
GATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTT < SRR4302534.4716338/94‑1 (MQ=60)
ATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTC < SRR4302534.1354578/94‑1 (MQ=60)
ATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTC > SRR4302534.1992059/1‑94 (MQ=60)
TTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCG > SRR4302534.5086355/1‑94 (MQ=60)
TTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCG < SRR4302534.10892/94‑1 (MQ=60)
TGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGC > SRR4302534.4429651/1‑94 (MQ=60)
ACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTT > SRR4302534.3482637/1‑94 (MQ=60)
CAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTC < SRR4302534.5460423/94‑1 (MQ=60)
AGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCG > SRR4302534.1320546/1‑94 (MQ=60)
AGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCG < SRR4302534.3680884/94‑1 (MQ=60)
AGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCG > SRR4302534.5550363/1‑94 (MQ=60)
AGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCG < SRR4302534.2372851/94‑1 (MQ=60)
AGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCG < SRR4302534.2740882/94‑1 (MQ=60)
AGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCG > SRR4302534.3165554/1‑94 (MQ=60)
TGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCT < SRR4302534.3412854/94‑1 (MQ=60)
TGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCT > SRR4302534.637350/1‑94 (MQ=60)
TTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTT > SRR4302534.1512815/1‑94 (MQ=60)
TCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTG < SRR4302534.70961/94‑1 (MQ=60)
TCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTC > SRR4302534.3378676/1‑94 (MQ=60)
TCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTC < SRR4302534.6310602/94‑1 (MQ=60)
ATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCCTTTGTCTG > SRR4302534.1160260/1‑94 (MQ=60)
TTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGG < SRR4302534.990402/94‑1 (MQ=60)
TTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGG < SRR4302534.6312726/94‑1 (MQ=60)
TTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGG < SRR4302534.6312725/94‑1 (MQ=60)
TTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGG > SRR4302534.610536/1‑94 (MQ=60)
TTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGG < SRR4302534.291041/94‑1 (MQ=60)
TTATCTGGCGCTGAAAACACCCATCAGCATCATCACCGGCCTGGTCCCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGG < SRR4302534.6246105/94‑1 (MQ=60)
TATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGG < SRR4302534.1399972/94‑1 (MQ=60)
TATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGG > SRR4302534.3635380/1‑94 (MQ=60)
ATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGG > SRR4302534.3314566/1‑94 (MQ=60)
ATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGG < SRR4302534.2960635/94‑1 (MQ=60)
ATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGG < SRR4302534.2049218/94‑1 (MQ=60)
CTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAT < SRR4302534.4920379/94‑1 (MQ=60)
CTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAT > SRR4302534.6097391/1‑94 (MQ=60)
CTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAT < SRR4302534.3097051/94‑1 (MQ=60)
GGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCCCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTG < SRR4302534.4354999/94‑1 (MQ=60)
CGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCC > SRR4302534.3300169/1‑94 (MQ=60)
CGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCC > SRR4302534.1904793/1‑94 (MQ=60)
CGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCC > SRR4302534.228361/1‑94 (MQ=60)
CGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCATGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCC < SRR4302534.6651674/94‑1 (MQ=60)
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ATTGCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCT > NC_000913/1672437‑1672622
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
