Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,672,622 T→C L229P (CTG→CCG)  b1601 → putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,672,6220TC100.0% 938.5 / NA 272L229P (CTG→CCG) b1601putative transport protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (124/148);  total (124/148)

Only 100 of 282 total aligned reads displayed.

TGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCT  >  NC_000913/1672532‑1672711
                                                                                          |                                                                                         
tGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCgg                                                                                         >  2:283881/1‑93 (MQ=255)
tGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCgg                                                                                         >  2:3214880/1‑93 (MQ=255)
tGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCgg                                                                                         >  2:5106872/1‑93 (MQ=255)
  aaaaCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGcc                                                                                       <  2:6117923/93‑1 (MQ=255)
  aaaaCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGcc                                                                                       <  1:8096162/93‑1 (MQ=255)
   aaaCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCTCTTCGCTTTTGTCTGGGGATTGCCGGCCt                                                                                      >  1:7675081/1‑93 (MQ=255)
   aaaCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCt                                                                                      >  2:6165328/1‑93 (MQ=255)
   aaaCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCt                                                                                      >  1:4371624/1‑93 (MQ=255)
    aaCAGCCATCAGCATCATCACCGGCGTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCtt                                                                                     <  2:3460605/93‑1 (MQ=255)
    aaCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCtt                                                                                     <  2:2422987/93‑1 (MQ=255)
    aaCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCtt                                                                                     >  1:3180909/1‑93 (MQ=255)
     aCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCttt                                                                                    <  1:6241087/93‑1 (MQ=255)
      cAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTg                                                                                   <  1:2854517/93‑1 (MQ=255)
         ccATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTgcgc                                                                                >  2:7001876/1‑93 (MQ=255)
          cATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCt                                                                               >  2:8389705/1‑93 (MQ=255)
          cATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCt                                                                               >  2:955930/1‑93 (MQ=255)
           aTCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCtt                                                                              <  1:6078766/93‑1 (MQ=255)
              aGCATCATCGCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAAt                                                                           <  2:7638942/93‑1 (MQ=255)
              aGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAAt                                                                           <  2:2649683/93‑1 (MQ=255)
                catcatCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTa                                                                         <  1:3686148/93‑1 (MQ=255)
                catcatCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTa                                                                         <  1:1570389/93‑1 (MQ=255)
                  tcatcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACa                                                                       <  2:3320173/93‑1 (MQ=255)
                  tcatcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACa                                                                       <  2:576213/93‑1 (MQ=255)
                  tcatcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACa                                                                       >  2:7871334/1‑93 (MQ=255)
                    atcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATc                                                                     >  1:4147954/1‑93 (MQ=255)
                      tcccGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATccc                                                                   <  1:1276757/91‑1 (MQ=255)
                       aCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCg                                                                  >  1:2073012/1‑93 (MQ=255)
                       aCCGGCCTGGTCGCCTGGGAGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCg                                                                  >  1:7150994/1‑93 (MQ=255)
                         cGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGaa                                                                <  2:4615967/93‑1 (MQ=255)
                          ggCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAat                                                               <  1:3425749/93‑1 (MQ=255)
                           gCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAata                                                              >  1:2914704/1‑93 (MQ=255)
                           gCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAata                                                              >  1:5229199/1‑93 (MQ=255)
                            ccTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAatat                                                             <  2:5972103/93‑1 (MQ=255)
                              tGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTg                                                           >  1:5711340/1‑93 (MQ=255)
                                gTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGt                                                         <  2:768691/93‑1 (MQ=255)
                                gTCGCCTGGGCGATGCTCGCCGCACGCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTGCATCCCGAATATTGGt                                                         <  2:5522261/93‑1 (MQ=255)
                                  cGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTc                                                       <  2:6397983/93‑1 (MQ=255)
                                     cTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGt                                                    >  2:4690918/1‑93 (MQ=255)
                                      tGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTc                                                   >  1:5624499/1‑93 (MQ=255)
                                       gggCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTcc                                                  <  2:6213974/93‑1 (MQ=255)
                                       gggCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTcc                                                  >  2:6927423/1‑93 (MQ=255)
                                        ggCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCt                                                 >  1:1464809/1‑93 (MQ=255)
                                         gCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTCATTACATCCCGAATATTGGTTCAGTCCTc                                                >  1:5541988/1‑93 (MQ=255)
                                         gCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTc                                                <  1:892431/93‑1 (MQ=255)
                                          cGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTcg                                               <  2:3844025/93‑1 (MQ=255)
                                           gATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTcgc                                              >  1:6790043/1‑93 (MQ=255)
                                           gATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTcgc                                              >  1:5761116/1‑93 (MQ=255)
                                           gATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTcgc                                              <  2:3412342/93‑1 (MQ=255)
                                              gCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGc                                           >  1:8232709/1‑93 (MQ=255)
                                               cTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCa                                          >  1:1617310/1‑93 (MQ=255)
                                               cTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCa                                          >  1:4594374/1‑93 (MQ=255)
                                               cTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCa                                          >  1:5426441/1‑93 (MQ=255)
                                                tCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGTCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCaa                                         <  1:8437167/93‑1 (MQ=255)
                                                tCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCaa                                         <  1:3864844/93‑1 (MQ=255)
                                                 cgccgcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGCATATTGGTTCAGTCCTCGCGCCAAt                                        >  1:1329227/1‑93 (MQ=255)
                                                 cgccgcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAAt                                        <  1:7898037/93‑1 (MQ=255)
                                                  gccgcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATc                                       >  1:2655808/1‑93 (MQ=255)
                                                  gccgcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATc                                       <  1:1253699/93‑1 (MQ=255)
                                                    cgcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATccc                                     <  2:6519829/93‑1 (MQ=255)
                                                     gcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATcccc                                    <  2:1799916/93‑1 (MQ=255)
                                                     gcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATcccc                                    >  2:5729070/1‑93 (MQ=255)
                                                      cACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATccccc                                   <  1:4615705/93‑1 (MQ=255)
                                                       ccTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATcccccc                                  <  2:8084496/92‑1 (MQ=255)
                                                       aCTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATcccccc                                  <  2:1281696/93‑1 (MQ=255)
                                                        cTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCt                                 >  2:4455776/1‑93 (MQ=255)
                                                         tCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTa                                >  2:5538345/1‑93 (MQ=255)
                                                         tCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTa                                <  2:272287/93‑1 (MQ=255)
                                                         tCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTa                                >  1:5208263/1‑93 (MQ=255)
                                                         tCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTa                                >  2:3578438/1‑93 (MQ=255)
                                                          cGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTAt                               <  1:2209655/93‑1 (MQ=255)
                                                          cGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTAt                               <  1:338450/93‑1 (MQ=255)
                                                           gATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATc                              <  1:604026/93‑1 (MQ=255)
                                                            aTGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCg                             >  2:5426738/1‑93 (MQ=255)
                                                             tGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGc                            >  2:7112227/1‑93 (MQ=255)
                                                              gTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCt                           <  1:4799761/93‑1 (MQ=255)
                                                              gTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCt                           <  2:4926964/93‑1 (MQ=255)
                                                              gTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCt                           >  2:2106438/1‑93 (MQ=255)
                                                              gTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCt                           >  1:4106719/1‑93 (MQ=255)
                                                                tcgcttcgctTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCa                         >  1:6499284/1‑93 (MQ=255)
                                                                  gcttcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAgg                       >  1:5379061/1‑93 (MQ=255)
                                                                   cttcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGt                      >  1:1832768/1‑93 (MQ=255)
                                                                   cttcgattTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGt                      <  1:3053770/93‑1 (MQ=255)
                                                                    ttcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGtc                     >  1:7541265/1‑92 (MQ=255)
                                                                    ttcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTa                     >  1:2429434/1‑93 (MQ=255)
                                                                    ttcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTa                     <  2:2302769/93‑1 (MQ=255)
                                                                    ttcgctgTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTa                     <  1:4459773/93‑1 (MQ=255)
                                                                     tcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTAc                    <  1:1498651/93‑1 (MQ=255)
                                                                      cgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCACTATCGCTCAGGTACt                   <  1:7980187/93‑1 (MQ=255)
                                                                        cttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTgg                 <  1:7102454/93‑1 (MQ=255)
                                                                         ttttGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTggg                >  1:4898763/1‑92 (MQ=255)
                                                                         ttttGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGgt                >  2:7238128/1‑93 (MQ=255)
                                                                         ttttGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATACCCCCTATCGCTCAGGTACTGgt                >  1:3506868/1‑93 (MQ=255)
                                                                          tttGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGgtg               <  2:7416838/93‑1 (MQ=255)
                                                                            tGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGtt             <  1:6818741/93‑1 (MQ=255)
                                                                                tGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAAt         >  2:428335/1‑93 (MQ=255)
                                                                                      ttGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTc   >  1:6608234/1‑93 (MQ=255)
                                                                                      ttGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTc   <  2:6747934/93‑1 (MQ=255)
                                                                                       tGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCt  <  1:7403873/93‑1 (MQ=255)
                                                                                       tGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCt  <  2:7913554/93‑1 (MQ=255)
                                                                                       tGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCt  <  1:7287016/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCT  >  NC_000913/1672532‑1672711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCTACGA  >  NC_000913/1672529‑1672715
                                                                                             |                                                                                             
CGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCC                                                                                               <  SRR4302541.2519573/94‑1 (MQ=60)
CGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCC                                                                                               >  SRR4302541.4216651/1‑94 (MQ=60)
 GCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCG                                                                                              >  SRR4302541.2744772/1‑94 (MQ=60)
 GCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCG                                                                                              >  SRR4302541.2744773/1‑94 (MQ=60)
 GCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCG                                                                                              <  SRR4302541.3102154/94‑1 (MQ=60)
  CTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGTGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGG                                                                                             >  SRR4302541.5362158/1‑94 (MQ=60)
  CTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGG                                                                                             <  SRR4302541.136352/94‑1 (MQ=60)
  CTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGG                                                                                             >  SRR4302541.1417774/1‑94 (MQ=60)
    GAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCC                                                                                           >  SRR4302541.4158242/1‑94 (MQ=60)
     AAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCTCTTCGCTTTTGTCTGGGGATTGCCGGCCT                                                                                          >  SRR4302541.7756683/1‑94 (MQ=60)
     AAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCT                                                                                          >  SRR4302541.4415302/1‑94 (MQ=60)
     AAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCT                                                                                          <  SRR4302541.8184917/94‑1 (MQ=60)
     AAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCT                                                                                          <  SRR4302541.6417054/94‑1 (MQ=60)
     AAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCT                                                                                          >  SRR4302541.3045192/1‑94 (MQ=60)
      AAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTT                                                                                         <  SRR4302541.3185185/94‑1 (MQ=60)
      AAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTT                                                                                         >  SRR4302541.3213037/1‑94 (MQ=60)
       AACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTT                                                                                        >  SRR4302541.2935719/1‑94 (MQ=60)
       AACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTT                                                                                        >  SRR4302541.3525999/1‑94 (MQ=60)
        ACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTG                                                                                       <  SRR4302541.6304849/94‑1 (MQ=60)
        ACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTG                                                                                       <  SRR4302541.7739114/94‑1 (MQ=60)
         CAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGC                                                                                      <  SRR4302541.2883217/94‑1 (MQ=60)
          AGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGGG                                                                                     >  SRR4302541.1300734/1‑94 (MQ=60)
          AGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCG                                                                                     <  SRR4302541.1294747/94‑1 (MQ=60)
          AGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCG                                                                                     <  SRR4302541.3520703/94‑1 (MQ=60)
           GCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGC                                                                                    <  SRR4302541.5755678/94‑1 (MQ=60)
             CATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTT                                                                                  <  SRR4302541.6410628/94‑1 (MQ=60)
              ATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCGCCCGATGTTAGCTTCGCTTTTGTCTGGGGCTGGCCGGCCTTTGCGCTTA                                                                                 >  SRR4302541.2310684/1‑94 (MQ=60)
              ATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTA                                                                                 <  SRR4302541.5665305/94‑1 (MQ=60)
              ATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTA                                                                                 >  SRR4302541.1483781/1‑94 (MQ=60)
              ATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTA                                                                                 >  SRR4302541.1483780/1‑94 (MQ=60)
              ATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTA                                                                                 <  SRR4302541.6140821/94‑1 (MQ=60)
                CAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAAT                                                                               >  SRR4302541.2026262/1‑94 (MQ=60)
                CAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAAT                                                                               >  SRR4302541.4584361/1‑94 (MQ=60)
                   CATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGCTTGCCGGCCTTTGCGCTTAATTAC                                                                            >  SRR4302541.5537933/1‑94 (MQ=60)
                   CATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTAC                                                                            <  SRR4302541.3723459/94‑1 (MQ=60)
                   CATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTAC                                                                            <  SRR4302541.1586107/94‑1 (MQ=60)
                   CATCATCACCGGCCTGGTCGCCTGGGCGATGCCCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTAC                                                                            >  SRR4302541.3766185/1‑94 (MQ=60)
                      CATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATC                                                                         <  SRR4302541.2623003/94‑1 (MQ=60)
                      CATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATC                                                                         >  SRR4302541.4188957/1‑94 (MQ=60)
                       CTCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCC                                                                        <  SRR4302541.2176511/94‑1 (MQ=60)
                       ATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCC                                                                        >  SRR4302541.5278110/1‑94 (MQ=60)
                       ATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCC                                                                        <  SRR4302541.3250037/94‑1 (MQ=60)
                        TCACCGGCGTGGGCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTTCCGGCCTTTGCGCTTAATTACATCCC                                                                       <  SRR4302541.358705/94‑1 (MQ=60)
                        TCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCC                                                                       <  SRR4302541.4336658/94‑1 (MQ=60)
                        TCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCC                                                                       <  SRR4302541.358706/94‑1 (MQ=60)
                         tcCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCG                                                                      <  SRR4302541.1289436/92‑1 (MQ=60)
                         CACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCG                                                                      <  SRR4302541.683494/94‑1 (MQ=60)
                         CACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCG                                                                      <  SRR4302541.7994356/94‑1 (MQ=60)
                         CACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCG                                                                      >  SRR4302541.2740083/1‑94 (MQ=60)
                         CACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCG                                                                      >  SRR4302541.2093054/1‑94 (MQ=60)
                         CACCGGCCTGGTCGCCTGGGAGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCG                                                                      >  SRR4302541.7227222/1‑94 (MQ=60)
                         CACCGGCCTGGTCGCCTGGGAGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCG                                                                      >  SRR4302541.7227223/1‑94 (MQ=60)
                          cgcggcttgggcggCTGGGCGATGCTCGCCCCACTCGAGCTTCGCTTCGCTTTTGTCCGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGA                                                                     <  SRR4302541.8141666/80‑1 (MQ=60)
                          ACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGA                                                                     >  SRR4302541.4169983/1‑94 (MQ=60)
                          ACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGA                                                                     >  SRR4302541.4851745/1‑94 (MQ=60)
                            CGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAAT                                                                   >  SRR4302541.4487579/1‑94 (MQ=60)
                            CGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAAT                                                                   <  SRR4302541.7232741/94‑1 (MQ=60)
                             GGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGTCGGCCTTTGCGCTTAATTACATCCCGAATA                                                                  >  SRR4302541.807115/1‑94 (MQ=60)
                             GGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATA                                                                  <  SRR4302541.3459956/94‑1 (MQ=60)
                             GGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATA                                                                  >  SRR4302541.5283079/1‑94 (MQ=60)
                             GGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATA                                                                  >  SRR4302541.2944018/1‑94 (MQ=60)
                              GCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATAT                                                                 <  SRR4302541.4650313/94‑1 (MQ=60)
                              GCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATAT                                                                 <  SRR4302541.1633242/94‑1 (MQ=60)
                                CTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTG                                                               >  SRR4302541.5769579/1‑94 (MQ=60)
                                 TGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGG                                                              <  SRR4302541.5440484/94‑1 (MQ=60)
                                 TGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGG                                                              >  SRR4302541.5271139/1‑94 (MQ=60)
                                 TGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGG                                                              >  SRR4302541.5772869/1‑94 (MQ=60)
                                  GGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGGGCTTTATTACATCACGGATATTGGT                                                             >  SRR4302541.7848315/1‑94 (MQ=60)
                                   GTCGCCTGGGCGATGCTTGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTT                                                            <  SRR4302541.4631866/94‑1 (MQ=60)
                                     CGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCA                                                          >  SRR4302541.2541456/1‑94 (MQ=60)
                                      GCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAG                                                         >  SRR4302541.8278333/1‑94 (MQ=60)
                                        CTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTC                                                       >  SRR4302541.5682043/1‑94 (MQ=60)
                                         TGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCC                                                      >  SRR4302541.2233111/1‑94 (MQ=60)
                                         TGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCC                                                      <  SRR4302541.5815471/94‑1 (MQ=60)
                                          GGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCT                                                     >  SRR4302541.6130358/1‑94 (MQ=60)
                                          GGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCT                                                     >  SRR4302541.1479154/1‑94 (MQ=60)
                                           GGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTCATTACATCCCGAATATTGGTTCAGTCCTC                                                    >  SRR4302541.5598732/1‑94 (MQ=60)
                                           GGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTC                                                    <  SRR4302541.83381/94‑1 (MQ=60)
                                           GGCGATGCTCACCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTC                                                    <  SRR4302541.8398191/94‑1 (MQ=60)
                                            GCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCG                                                   <  SRR4302541.900636/94‑1 (MQ=60)
                                             CGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGC                                                  >  SRR4302541.5819743/1‑94 (MQ=60)
                                             CGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGC                                                  >  SRR4302541.6862650/1‑94 (MQ=60)
                                              GATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCG                                                 <  SRR4302541.6109630/94‑1 (MQ=60)
                                              GATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCG                                                 >  SRR4302541.4419395/1‑94 (MQ=60)
                                              GATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCG                                                 <  SRR4302541.8249198/94‑1 (MQ=60)
                                               ATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGG                                                <  SRR4302541.1909457/94‑1 (MQ=60)
                                                TGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGC                                               >  SRR4302541.8322452/1‑94 (MQ=60)
                                                TGCTCGCCGCACTCGATGTTCGCTTCGCTTGTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGC                                               <  SRR4302541.1268067/94‑1 (MQ=60)
                                                 GCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCA                                              >  SRR4302541.5482113/1‑94 (MQ=60)
                                                 GCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCA                                              >  SRR4302541.4640975/1‑94 (MQ=60)
                                                 GCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCA                                              >  SRR4302541.1633358/1‑94 (MQ=60)
                                                  CTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAA                                             >  SRR4302541.2364477/1‑94 (MQ=60)
                                                   taccccctCTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGGCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAAT                                            <  SRR4302541.3054166/86‑1 (MQ=60)
                                                   TCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGTCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAAT                                            <  SRR4302541.8528309/94‑1 (MQ=60)
                                                   TCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGCATATTGGTTCAGTCCTCGCGCCAAT                                            >  SRR4302541.1342289/1‑94 (MQ=60)
                                                   TCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAAT                                            <  SRR4302541.3903720/94‑1 (MQ=60)
                                                   TCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAAT                                            <  SRR4302541.7413098/94‑1 (MQ=60)
                                                    CGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATC                                           <  SRR4302541.7984903/94‑1 (MQ=60)
                                                    CGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATC                                           >  SRR4302541.2682227/1‑94 (MQ=60)
                                                     GCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCC                                          <  SRR4302541.4018798/94‑1 (MQ=60)
                                                     GCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCC                                          >  SRR4302541.5136642/1‑94 (MQ=60)
                                                     GCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCC                                          <  SRR4302541.1266135/94‑1 (MQ=60)
                                                       CGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCC                                        <  SRR4302541.6185286/94‑1 (MQ=60)
                                                       CGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCC                                        >  SRR4302541.8786011/1‑94 (MQ=60)
                                                       CGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCC                                        >  SRR4302541.6783644/1‑94 (MQ=60)
                                                         CACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGTCTTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCC                                      <  SRR4302541.4644459/94‑1 (MQ=60)
                                                         CACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCC                                      <  SRR4302541.4662603/94‑1 (MQ=60)
                                                          CCTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCT                                     <  SRR4302541.7470339/94‑1 (MQ=60)
                                                          ACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCT                                     <  SRR4302541.3818785/94‑1 (MQ=60)
                                                          ACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCT                                     <  SRR4302541.2936480/94‑1 (MQ=60)
                                                          ACTCGATGGTCGCTTCGCTTTTGGTTGGGTATTGCCTGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCGCGCGGCAATCCCCCCT                                     <  SRR4302541.7470340/94‑1 (MQ=60)
                                                           CTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTA                                    >  SRR4302541.6658301/1‑94 (MQ=60)
                                                           CTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTA                                    >  SRR4302541.6658302/1‑94 (MQ=60)
                                                           CTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTA                                    >  SRR4302541.7963130/1‑94 (MQ=60)
                                                           CTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTA                                    >  SRR4302541.5296515/1‑94 (MQ=60)
                                                           CTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTA                                    >  SRR4302541.5261924/1‑94 (MQ=60)
                                                            TCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTAT                                   >  SRR4302541.4713778/1‑94 (MQ=60)
                                                             CGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATC                                  <  SRR4302541.7769801/94‑1 (MQ=60)
                                                             CGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATC                                  <  SRR4302541.341482/94‑1 (MQ=60)
                                                             CGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATC                                  >  SRR4302541.685575/1‑94 (MQ=60)
                                                             CGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATC                                  <  SRR4302541.2231076/94‑1 (MQ=60)
                                                              GATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCG                                 <  SRR4302541.609712/94‑1 (MQ=60)
                                                              GATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTACTCGCGGCAATCCCCCCTATCG                                 <  SRR4302541.1534043/94‑1 (MQ=60)
                                                               ATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGC                                >  SRR4302541.3453594/1‑94 (MQ=60)
                                                                TGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCCATCCCCCCTATCGCT                               >  SRR4302541.3187353/1‑94 (MQ=60)
                                                                TGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCT                               >  SRR4302541.4147276/1‑94 (MQ=60)
                                                                 GTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTC                              <  SRR4302541.2954403/94‑1 (MQ=60)
                                                                 GTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTC                              <  SRR4302541.4848717/94‑1 (MQ=60)
                                                                  TTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCA                             >  SRR4302541.1733547/1‑94 (MQ=60)
                                                                  TTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCA                             >  SRR4302541.6565560/1‑94 (MQ=60)
                                                                    CGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGG                           >  SRR4302541.5434268/1‑94 (MQ=60)
                                                                    CGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGG                           >  SRR4302541.5434270/1‑94 (MQ=60)
                                                                     GCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGT                          >  SRR4302541.1850538/1‑94 (MQ=60)
                                                                      CTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTC                         >  SRR4302541.7621870/1‑94 (MQ=60)
                                                                      CTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTA                         >  SRR4302541.2453459/1‑94 (MQ=60)
                                                                      CTTCGATTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTA                         <  SRR4302541.3084690/94‑1 (MQ=60)
                                                                       TTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTAC                        >  SRR4302541.5209184/1‑94 (MQ=60)
                                                                       TTCGCTGTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTAC                        <  SRR4302541.4504667/94‑1 (MQ=60)
                                                                        TCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACT                       <  SRR4302541.1513468/94‑1 (MQ=60)
                                                                         CGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTG                      <  SRR4302541.772492/94‑1 (MQ=60)
                                                                         CGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTG                      <  SRR4302541.7134066/94‑1 (MQ=60)
                                                                         CGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCACTATCGCTCAGGTACTG                      <  SRR4302541.8068100/94‑1 (MQ=60)
                                                                          GCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGG                     <  SRR4302541.7189352/94‑1 (MQ=60)
                                                                           CTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGT                    >  SRR4302541.2151610/1‑94 (MQ=60)
                                                                           CTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGT                    <  SRR4302541.7178044/94‑1 (MQ=60)
                                                                           CTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGT                    <  SRR4302541.5978077/94‑1 (MQ=60)
                                                                           CTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGG                    >  SRR4302541.4948747/1‑94 (MQ=60)
                                                                           CTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATACCCCCTATCGCTCAGGTACTGGT                    >  SRR4302541.3542094/1‑94 (MQ=60)
                                                                            TTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTG                   <  SRR4302541.7564358/94‑1 (MQ=60)
                                                                             TGTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGT                  <  SRR4302541.8687761/94‑1 (MQ=60)
                                                                               TGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTT                <  SRR4302541.6891704/94‑1 (MQ=60)
                                                                               TGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTT                <  SRR4302541.6891705/94‑1 (MQ=60)
                                                                                  CTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCTAATATTGGTTCAGTCCTCGCGTCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAAT             <  SRR4302541.5591027/94‑1 (MQ=60)
                                                                                  CTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAAT             >  SRR4302541.5908593/1‑94 (MQ=60)
                                                                                   TGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATG            <  SRR4302541.7032404/94‑1 (MQ=60)
                                                                                   TGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATG            >  SRR4302541.1397393/1‑94 (MQ=60)
                                                                                   TGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATG            >  SRR4302541.1710307/1‑94 (MQ=60)
                                                                                      GGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCT         <  SRR4302541.5757381/94‑1 (MQ=60)
                                                                                      GGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCT         <  SRR4302541.1564000/94‑1 (MQ=60)
                                                                                       GATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTT        <  SRR4302541.7582963/94‑1 (MQ=60)
                                                                                        ATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTC       >  SRR4302541.6675948/1‑94 (MQ=60)
                                                                                         TTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCT      <  SRR4302541.3222672/94‑1 (MQ=60)
                                                                                         TTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCT      <  SRR4302541.4845077/94‑1 (MQ=60)
                                                                                          TGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCTA     <  SRR4302541.7364776/94‑1 (MQ=60)
                                                                                          TGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCTA     >  SRR4302541.4755419/1‑94 (MQ=60)
                                                                                          TGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCTA     <  SRR4302541.4096544/94‑1 (MQ=60)
                                                                                          TGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCTA     <  SRR4302541.7483057/94‑1 (MQ=60)
                                                                                           GCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCTAC    <  SRR4302541.2391231/94‑1 (MQ=60)
                                                                                           GCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCTAC    <  SRR4302541.2374790/94‑1 (MQ=60)
                                                                                            CCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCTTCG   >  SRR4302541.6277951/1‑94 (MQ=60)
                                                                                            CCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCTACG   >  SRR4302541.5224542/1‑94 (MQ=60)
                                                                                             CGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCTACGA  >  SRR4302541.3672620/1‑94 (MQ=60)
                                                                                             |                                                                                             
TGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCTACGA  >  NC_000913/1672529‑1672715

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑