Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,722,918 |
T→A |
N247Y (AAC→TAC) |
b1647 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,722,918 | 0 | T | A | 100.0%
| 759.8
/ NA
| 197 | N247Y (AAC→TAC) | b1647 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (112/85); total (112/85) |
Only 100 of 204 total aligned reads displayed.
TTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTTAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAAC > NC_000913/1722828‑1723006
|
ttCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAac < 1:5758307/93‑1 (MQ=255)
cTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAacca < 1:2042859/93‑1 (MQ=255)
cTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAAGCGTAAacca > 2:5896107/1‑93 (MQ=255)
gCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAaccacc < 1:5444466/93‑1 (MQ=255)
gCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAaccacc < 1:5054474/93‑1 (MQ=255)
gCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAaccacc < 2:3926839/93‑1 (MQ=255)
gCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCCGCGATGGTAAACGTAATACCCAGGCGTAAaccacc > 1:2342416/1‑93 (MQ=255)
tCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGt < 2:4089078/93‑1 (MQ=255)
cGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAGTTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGtt < 2:3391860/93‑1 (MQ=255)
gACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTc < 2:2374195/93‑1 (MQ=255)
gACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTc > 2:1275167/1‑93 (MQ=255)
gACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTc > 2:1320597/1‑93 (MQ=255)
gACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTc < 1:3672315/93‑1 (MQ=255)
aCAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCa > 1:3776996/1‑93 (MQ=255)
aCAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCa > 1:1942356/1‑93 (MQ=255)
aGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAAt < 2:5272306/93‑1 (MQ=255)
aGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAAt > 2:3621068/1‑93 (MQ=255)
aGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAAt > 2:6161539/1‑93 (MQ=255)
gCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATc > 2:4260899/1‑93 (MQ=255)
gCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATc < 2:5221697/93‑1 (MQ=255)
tGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGa < 2:2146804/93‑1 (MQ=255)
gCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAg > 2:2794062/1‑93 (MQ=255)
ccGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGcc < 1:2964913/93‑1 (MQ=255)
ccGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGcc < 2:4883712/93‑1 (MQ=255)
ccGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGcc < 2:3563571/93‑1 (MQ=255)
ccGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCCAGcc > 2:257073/1‑93 (MQ=255)
cgcgCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGt < 1:3215250/93‑1 (MQ=255)
cgcgCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGt > 2:3716844/1‑93 (MQ=255)
cgcTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGttt < 2:3073338/93‑1 (MQ=255)
gcTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTa > 2:3252924/1‑93 (MQ=255)
tCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAc > 1:1112947/1‑93 (MQ=255)
tCAATTTTACCTGAACCGATAATTGGCAGCCGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAc > 1:5287256/1‑93 (MQ=255)
aTTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcc > 2:2684758/1‑93 (MQ=255)
ttttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcct < 2:3931492/93‑1 (MQ=255)
tACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTg > 2:3288454/1‑93 (MQ=255)
tACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTg < 2:247701/93‑1 (MQ=255)
tACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTg < 1:4954908/93‑1 (MQ=255)
aCCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGc > 1:670389/1‑93 (MQ=255)
aCCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGc > 2:5615086/1‑93 (MQ=255)
aCCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAAACACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGc > 2:1735171/1‑93 (MQ=255)
cTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGcca > 2:4838956/1‑93 (MQ=255)
tGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGccac < 2:1564669/93‑1 (MQ=255)
tGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGccac < 1:556361/93‑1 (MQ=255)
gAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGccacc > 1:4476065/1‑93 (MQ=255)
aaCCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGccacca < 1:53798/93‑1 (MQ=255)
aCCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCcaccac > 1:2107251/1‑93 (MQ=255)
aCCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCcaccac > 1:1041835/1‑93 (MQ=255)
ccGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACcaca < 2:2308595/93‑1 (MQ=255)
ccGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACcaca < 2:4332195/93‑1 (MQ=255)
gATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGc < 1:2500305/93‑1 (MQ=255)
aTAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGcc > 1:4701291/1‑93 (MQ=255)
tGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtc > 1:5019551/1‑93 (MQ=255)
ggCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtca < 2:5201636/93‑1 (MQ=255)
ggCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtca > 2:4466259/1‑93 (MQ=255)
ggCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtca > 2:1758698/1‑93 (MQ=255)
ggCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtca > 1:3447844/1‑93 (MQ=255)
gCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtcat < 1:1802715/93‑1 (MQ=255)
gCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCAc < 2:6259247/93‑1 (MQ=255)
gCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCAc > 2:1962617/1‑93 (MQ=255)
gCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCAc > 1:4794961/1‑93 (MQ=255)
ggCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGc < 2:1684007/93‑1 (MQ=255)
ggCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGc > 1:3252886/1‑93 (MQ=255)
gCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCa > 2:6067682/1‑93 (MQ=255)
gCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCa > 2:1481855/1‑93 (MQ=255)
cTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAg > 1:560975/1‑93 (MQ=255)
cTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAg < 2:3993590/93‑1 (MQ=255)
tGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGc > 2:3727797/1‑93 (MQ=255)
aTGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCt < 2:4429586/93‑1 (MQ=255)
aTGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCt > 2:4566838/1‑93 (MQ=255)
aTGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCt > 2:5960228/1‑93 (MQ=255)
aTGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCt > 2:1507227/1‑93 (MQ=255)
tGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTg > 1:77949/1‑93 (MQ=255)
tGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTg > 2:107361/1‑93 (MQ=255)
tGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTg > 2:3231353/1‑93 (MQ=255)
ggTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTgg > 2:4954602/1‑93 (MQ=255)
ggTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTgg > 2:5638921/1‑93 (MQ=255)
aatcGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCTCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGaaa < 2:4742153/90‑1 (MQ=255)
cGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAaataa < 1:3586635/93‑1 (MQ=255)
cGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAaataa < 2:6215652/93‑1 (MQ=255)
tAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAaataatg < 1:4672046/93‑2 (MQ=255)
tAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatc > 2:2027087/1‑93 (MQ=255)
tAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatc < 2:473184/93‑1 (MQ=255)
tAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatc > 1:641161/1‑93 (MQ=255)
tAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatc < 2:3594224/93‑1 (MQ=255)
aTACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatcat > 2:379891/1‑93 (MQ=255)
aTACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatcat > 1:418134/1‑93 (MQ=255)
aTACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatcat > 1:3990878/1‑93 (MQ=255)
aTACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatcat < 2:5412623/93‑1 (MQ=255)
tACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatcatc < 1:2271461/93‑1 (MQ=255)
aCCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAAtcatca < 1:5850328/93‑1 (MQ=255)
ccAGGCGTAAACCACCTGTTCAATCGAGGCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGCAATAATCATCAtt > 1:4021016/1‑93 (MQ=255)
ccAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCAtt > 1:5033132/1‑93 (MQ=255)
ccAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCAtt > 2:3877705/1‑93 (MQ=255)
cAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTa > 2:2974759/1‑93 (MQ=255)
aGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGGAATACTAATCATTaa > 1:95980/1‑93 (MQ=255)
aGGAGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTaa < 2:5562735/93‑1 (MQ=255)
ggCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTaaa < 1:4835478/93‑1 (MQ=255)
ggCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTaaa > 2:5695875/1‑93 (MQ=255)
ggCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTaaa > 1:628099/1‑93 (MQ=255)
gCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAAc > 1:1546618/1‑93 (MQ=255)
|
TTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTTAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAAC > NC_000913/1722828‑1723006
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGTTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTTAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGACG > NC_000913/1722826‑1723011
|
TGTTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAA > SRR4302534.6288034/1‑94 (MQ=60)
TTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACC < SRR4302534.5914503/94‑1 (MQ=60)
CTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCAC < SRR4302534.2096259/94‑1 (MQ=60)
TGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCCGCGATGGTAAACGTAATACCCAGGCGTAAACCACC > SRR4302534.2404578/1‑94 (MQ=60)
GCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCT < SRR4302534.5190986/94‑1 (MQ=60)
GCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCT < SRR4302534.5591147/94‑1 (MQ=60)
TCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTT < SRR4302534.2083796/94‑1 (MQ=60)
CGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTC < SRR4302534.1069504/94‑1 (MQ=60)
GACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCA > SRR4302534.3878396/1‑94 (MQ=60)
GACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCA < SRR4302534.3771040/94‑1 (MQ=60)
GACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCA > SRR4302534.1993149/1‑94 (MQ=60)
CAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTatat > SRR4302534.5479417/1‑90 (MQ=60)
AGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATC < SRR4302534.3310422/94‑1 (MQ=60)
TGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAG > SRR4302534.4123469/1‑94 (MQ=60)
CCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCC < SRR4302534.3042562/94‑1 (MQ=60)
CCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCC > SRR4302534.713875/1‑94 (MQ=60)
TACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCG < SRR4302534.5583192/94‑1 (MQ=60)
CGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTT < SRR4302534.5174575/94‑1 (MQ=60)
CGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTT < SRR4302534.3300582/94‑1 (MQ=60)
GCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTT < SRR4302534.4931430/94‑1 (MQ=60)
CCGCTCAAGTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTT < SRR4302534.4074136/94‑1 (MQ=60)
CTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAC > SRR4302534.1141995/1‑94 (MQ=60)
CTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAC < SRR4302534.2359070/94‑1 (MQ=60)
CTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAC > SRR4302534.1954610/1‑94 (MQ=60)
CTCAATTTTACCTGAACCGATAATTGGCAGCCGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAC > SRR4302534.5429977/1‑94 (MQ=60)
AATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCC < SRR4302534.371030/94‑1 (MQ=60)
TTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTG > SRR4302534.5717049/1‑94 (MQ=60)
TACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGC < SRR4302534.5089101/94‑1 (MQ=60)
TACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGC > SRR4302534.686723/1‑94 (MQ=60)
ACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCC > SRR4302534.4981304/1‑94 (MQ=60)
ACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCC < SRR4302534.3285366/94‑1 (MQ=60)
TGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACC > SRR4302534.4597149/1‑94 (MQ=60)
TGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACC < SRR4302534.570074/94‑1 (MQ=60)
GAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCA > SRR4302534.4766723/1‑94 (MQ=60)
AACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCAC > SRR4302534.2162615/1‑94 (MQ=60)
AACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCAC > SRR4302534.1068737/1‑94 (MQ=60)
AACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCAC < SRR4302534.55248/94‑1 (MQ=60)
ACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACA > SRR4302534.4821455/1‑94 (MQ=60)
ACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACA > SRR4302534.2263374/1‑94 (MQ=60)
ACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACA > SRR4302534.4504301/1‑94 (MQ=60)
CGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGC > SRR4302534.5841652/1‑94 (MQ=60)
GATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCC < SRR4302534.4071519/94‑1 (MQ=60)
GATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCC > SRR4302534.4828923/1‑94 (MQ=60)
GATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCC < SRR4302534.2566691/94‑1 (MQ=60)
ATAATTGGCAGCGGCTGCGATGGTAAACGCAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCA > SRR4302534.5999141/1‑94 (MQ=60)
TTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTC > SRR4302534.5155171/1‑94 (MQ=60)
TGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCA > SRR4302534.4162275/1‑94 (MQ=60)
TGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCA > SRR4302534.3540516/1‑94 (MQ=60)
GGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCAT > SRR4302534.5670634/1‑94 (MQ=60)
GCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATC < SRR4302534.1849533/94‑1 (MQ=60)
AGCGGCTGCGATGTTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCAC < SRR4302534.1738281/94‑1 (MQ=60)
AGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCAC > SRR4302534.4925154/1‑94 (MQ=60)
CGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGC > SRR4302534.3339529/1‑94 (MQ=60)
GCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAG > SRR4302534.574778/1‑94 (MQ=60)
TGCGATGGTTAACGTAATACACAGGCGTAAACCACCTGTTCAATCGAGCCCGTGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCG > SRR4302534.6494822/1‑94 (MQ=60)
TGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCG > SRR4302534.48507/1‑94 (MQ=60)
TGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCG > SRR4302534.3627751/1‑94 (MQ=60)
GATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCT < SRR4302534.5420385/94‑1 (MQ=60)
GATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCT < SRR4302534.2425566/94‑1 (MQ=60)
GATGGTAAACGTAATACCCAGGCGGAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCT > SRR4302534.3786642/1‑94 (MQ=60)
ATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTG > SRR4302534.80057/1‑94 (MQ=60)
TGGTAAACGTAATGCCCAGGCGTAACCCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGG < SRR4302534.870611/94‑1 (MQ=60)
TGGTAAACGTAACACCCAGGCGAAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGG < SRR4302534.351508/94‑1 (MQ=60)
CGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAAT < SRR4302534.3683105/94‑1 (MQ=60)
GTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATC > SRR4302534.656720/1‑94 (MQ=60)
TAATACCCAGGCGTAAACCGCCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCA < SRR4302534.5055035/94‑1 (MQ=60)
TAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATGA < SRR4302534.4798862/94‑1 (MQ=60)
AATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCAT > SRR4302534.428832/1‑94 (MQ=60)
AATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCAT > SRR4302534.4097688/1‑94 (MQ=60)
ATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATC < SRR4302534.1288329/94‑1 (MQ=60)
TACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCA < SRR4302534.2331695/94‑1 (MQ=60)
ACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCAT < SRR4302534.6009184/94‑1 (MQ=60)
ACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCAT > SRR4302534.2777724/1‑94 (MQ=60)
ACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCAT < SRR4302534.5167664/94‑1 (MQ=60)
CCCAGGCGTAAACCACCTGTTCAATCGAGGCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGCAATAATCATCATT > SRR4302534.4128818/1‑94 (MQ=60)
CCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATT > SRR4302534.5169088/1‑94 (MQ=60)
CCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATT < SRR4302534.6383302/94‑1 (MQ=60)
CCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTA > SRR4302534.2105875/1‑94 (MQ=60)
CAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGGAATACTAATCATTAA > SRR4302534.98548/1‑94 (MQ=60)
CAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAA > SRR4302534.665145/1‑94 (MQ=60)
AGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAA > SRR4302534.643337/1‑94 (MQ=60)
GGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAAC < SRR4302534.5099074/94‑1 (MQ=60)
GGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAAC > SRR4302534.1587150/1‑94 (MQ=60)
GGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAAC < SRR4302534.4966669/94‑1 (MQ=60)
GTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGA < SRR4302534.564004/94‑1 (MQ=60)
GTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGA < SRR4302534.3557343/94‑1 (MQ=60)
TAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGAC < SRR4302534.3896074/94‑1 (MQ=60)
TAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGAC > SRR4302534.6319160/1‑94 (MQ=60)
AAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGACG < SRR4302534.5102450/94‑1 (MQ=60)
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TGTTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTTAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGACG > NC_000913/1722826‑1723011
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
