Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,015,425 |
A→T |
L90Q (CTG→CAG) |
fabA ← |
beta‑hydroxydecanoyl thioester dehydrase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,015,425 | 0 | A | T | 99.4%
| 665.3
/ ‑3.5
| 178 | L90Q (CTG→CAG) | fabA | beta‑hydroxydecanoyl thioester dehydrase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base T (88/89); total (89/89) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.13e-01 |
Only 100 of 188 total aligned reads displayed.
GCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCAGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGAT > NC_000913/1015336‑1015513
|
gCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCt > 1:5347022/1‑93 (MQ=255)
cAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACctgctg > 2:5379037/1‑93 (MQ=255)
aGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCtgctgc > 1:3391066/1‑93 (MQ=255)
aGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCtgctgc > 1:4012738/1‑93 (MQ=255)
aGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCtgctgc < 1:5531179/93‑1 (MQ=255)
gTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGcc > 2:4412243/1‑93 (MQ=255)
tACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCca < 1:4748991/93‑1 (MQ=255)
tACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCca > 1:3375262/1‑93 (MQ=255)
tACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCca > 2:2763538/1‑93 (MQ=255)
ccTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCcaca < 2:3669134/93‑1 (MQ=255)
ccTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCcaca < 2:5818603/93‑1 (MQ=255)
cTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACAt > 1:3012594/1‑93 (MQ=255)
ccAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCg > 2:3499940/1‑93 (MQ=255)
ccAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCg > 2:5255368/1‑93 (MQ=255)
ccAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCg < 2:831514/93‑1 (MQ=255)
cAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGGAGAACCCTACCTGCTGCCACATTGCGt > 2:3102640/1‑93 (MQ=255)
gTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTcc > 2:4672376/1‑93 (MQ=255)
tGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTcca < 1:864652/93‑1 (MQ=255)
tGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTcca > 1:4907352/1‑93 (MQ=255)
tGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTcca < 2:2210386/93‑1 (MQ=255)
tGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTcca > 2:1836520/1‑93 (MQ=255)
tGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTcca < 2:449457/93‑1 (MQ=255)
tGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTcca > 1:108648/1‑93 (MQ=255)
gAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccag < 1:4943693/93‑1 (MQ=255)
aaTTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccagg > 1:1222293/1‑93 (MQ=255)
aTTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccaggc < 2:1700505/93‑1 (MQ=255)
tttCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccaggcc > 1:5634676/1‑93 (MQ=255)
tttCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccaggcc < 2:2450939/93‑1 (MQ=255)
tCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccaggccca > 2:1585706/1‑93 (MQ=255)
tCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccaggccca < 1:792232/93‑1 (MQ=255)
tCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccaggccca > 1:1095551/1‑93 (MQ=255)
tCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccaggccca > 1:1851489/1‑93 (MQ=255)
cACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGTGGTAGAACCCTACCTGCTGCCACATTGCGTccaggcccag < 2:1370258/93‑1 (MQ=255)
cACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccaggcccag > 2:4751402/1‑93 (MQ=255)
aCTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccaggcccagg < 2:4163670/93‑1 (MQ=255)
ttCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCa < 2:3244394/93‑1 (MQ=255)
ccAACGCCCAGCGCGCGGCTTTCACCTTCGCCTCCGAGCCAGCCGAGGTAGAACCCTCCCTGCTGCCACATTGCGTCCAGGCCCAGGCATccc < 1:2033045/93‑1 (MQ=255)
cAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCg > 2:3197921/1‑93 (MQ=255)
aaCGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCgg > 2:4777841/1‑93 (MQ=255)
aaCGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCgg > 1:2106833/1‑93 (MQ=255)
aaCGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCgg > 1:5614905/1‑93 (MQ=255)
aaCGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCgg > 1:6104209/1‑93 (MQ=255)
cGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCa < 1:2124279/93‑1 (MQ=255)
gCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCAt > 2:2460139/1‑93 (MQ=255)
gCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCAt > 2:3429541/1‑93 (MQ=255)
gCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATACCGGCAt > 1:4967932/1‑93 (MQ=255)
ccAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATaa < 1:4274158/93‑1 (MQ=255)
caatgcgcgGCATTTCCCTACTCCAACTAGCCAGCTGAGGTAGAACCCTACCTGCTGCCGCATTGCGTCCAGGCCCAGGCATCCCGGCATAAc < 2:2256766/89‑1 (MQ=255)
cAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAAc > 1:1750629/1‑93 (MQ=255)
cAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAAc < 1:2437229/93‑1 (MQ=255)
gcgcgcGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCg < 2:2972379/93‑1 (MQ=255)
cgcgcgGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCAAGGCATCCCGGCATAACAgg > 1:4617225/1‑93 (MQ=255)
gcgcgGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGa < 2:4967300/93‑1 (MQ=255)
cgcgGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGAt < 1:2842922/93‑1 (MQ=255)
ggCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGc > 1:237711/1‑93 (MQ=255)
gCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGcc > 2:4382850/1‑93 (MQ=255)
gCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGcc > 2:2658083/1‑93 (MQ=255)
gCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGcc < 1:4790384/93‑1 (MQ=255)
ccTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCa > 2:1663627/1‑93 (MQ=255)
ccTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCa > 1:1990015/1‑93 (MQ=255)
tttACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAAt < 1:4586695/93‑1 (MQ=255)
ttACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATa < 2:4479657/93‑1 (MQ=255)
aCCTTCGCCGCACAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATaaa < 1:3833349/93‑1 (MQ=255)
ccTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAg < 1:3831306/93‑1 (MQ=255)
ccTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAg < 1:1996338/93‑1 (MQ=255)
ccTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCAGCATAACCGGATCGCCAATaacg > 1:4492364/1‑91 (MQ=255)
cTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAGAGt > 2:1090821/1‑93 (MQ=255)
cTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGt < 1:998877/93‑1 (MQ=255)
cTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGt > 1:957790/1‑93 (MQ=255)
cTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGt < 1:1414547/93‑1 (MQ=255)
gccaccCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCa < 1:3203535/93‑1 (MQ=255)
gccCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATcc < 2:3591623/93‑1 (MQ=255)
ccccAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATcc < 1:5140614/92‑1 (MQ=255)
ccagccagCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCga > 2:5740674/1‑93 (MQ=255)
cagccagcCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCgaa > 1:1661327/1‑93 (MQ=255)
agccagccGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCgaag < 1:5753561/93‑1 (MQ=255)
agccagccGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCgaag < 1:5244347/93‑1 (MQ=255)
cagccGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAAc < 2:1391099/93‑1 (MQ=255)
gccGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACca > 2:2891140/1‑93 (MQ=255)
ccGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACcac < 1:2509300/93‑1 (MQ=255)
gAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACcacat > 2:64322/1‑92 (MQ=255)
gAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAg > 2:5338099/1‑93 (MQ=255)
gAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAg < 2:3556226/93‑1 (MQ=255)
ggTAGAACCCTACCAGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGAt > 1:2236305/1‑93 (MQ=255)
agTAGAACCCTACCTGCTGCCACATTGCGCCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGAt < 2:2136953/92‑1 (MQ=255)
gTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATc > 1:2855063/1‑93 (MQ=255)
aGACCCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCg < 1:3441604/93‑1 (MQ=255)
aGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCg < 2:4687788/93‑1 (MQ=255)
aGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCg > 2:5542784/1‑93 (MQ=255)
gAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCgg < 2:1719884/93‑1 (MQ=255)
aaCCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGa > 2:5624341/1‑93 (MQ=255)
aCCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGAt < 2:4881094/93‑1 (MQ=255)
aCCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGAt > 2:376996/1‑93 (MQ=255)
aCCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGAt > 1:4703813/1‑93 (MQ=255)
aCCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGAt > 2:723000/1‑93 (MQ=255)
cccTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGAtt < 2:3409847/93‑1 (MQ=255)
cccTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGAtt > 2:3473994/1‑93 (MQ=255)
cccTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCCGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGCAtt > 1:5905983/1‑93 (MQ=255)
cTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGa > 2:3939339/1‑93 (MQ=255)
tACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGat > 2:744820/1‑93 (MQ=255)
|
GCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCAGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGAT > NC_000913/1015336‑1015513
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTCGGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCAGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGATATC > NC_000913/1015332‑1015516
|
GTCGGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCT < SRR4302532.1757356/94‑1 (MQ=60)
GTCGGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCT < SRR4302532.2096389/94‑1 (MQ=60)
GGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCT > SRR4302532.5532537/1‑94 (MQ=60)
CAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGC > SRR4302532.3504500/1‑94 (MQ=60)
CAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGC > SRR4302532.4147948/1‑94 (MQ=60)
AGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCC > SRR4302532.5137249/1‑94 (MQ=60)
AGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCC < SRR4302532.5723125/94‑1 (MQ=60)
GTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCA > SRR4302532.3488139/1‑94 (MQ=60)
GTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCA > SRR4302532.2796927/1‑94 (MQ=60)
TACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCAC > SRR4302532.883448/1‑94 (MQ=60)
TACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCAC < SRR4302532.4911305/94‑1 (MQ=60)
TACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGACTAGGCAGAACCCTACCTGCTGCCAC > SRR4302532.970467/1‑94 (MQ=60)
CCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACAT > SRR4302532.3112038/1‑94 (MQ=60)
CTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATT > SRR4302532.4509942/1‑94 (MQ=60)
TGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTG > SRR4302532.5343962/1‑94 (MQ=60)
TGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTG > SRR4302532.5731622/1‑94 (MQ=60)
GACCAGTGAATTTCACTTCGCCAACGCCGAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGC < SRR4302532.1353389/94‑1 (MQ=60)
cactaaattcCACTTCGCCAACGCCCAGCCCGCGGCCTTTACCTTCTCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTC < SRR4302532.1069662/84‑1 (MQ=60)
CAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTC > SRR4302532.1929798/1‑94 (MQ=60)
CAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTC > SRR4302532.4707301/1‑94 (MQ=60)
GTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCA > SRR4302532.112395/1‑94 (MQ=60)
GTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCA > SRR4302532.5075975/1‑94 (MQ=60)
TGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAG < SRR4302532.894306/94‑1 (MQ=60)
TGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAG < SRR4302532.5547621/94‑1 (MQ=60)
GAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGG > SRR4302532.1263181/1‑94 (MQ=60)
GAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGG > SRR4302532.2234158/1‑94 (MQ=60)
GAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGG < SRR4302532.5113377/94‑1 (MQ=60)
AATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGC < SRR4302532.4872707/94‑1 (MQ=60)
ATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCC > SRR4302532.5830387/1‑94 (MQ=60)
TTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCA > SRR4302532.1912926/1‑94 (MQ=60)
TTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCA > SRR4302532.1132186/1‑94 (MQ=60)
TCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAG < SRR4302532.819349/94‑1 (MQ=60)
CACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGG < SRR4302532.476350/94‑1 (MQ=60)
GCTAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCC < SRR4302532.218612/94‑1 (MQ=60)
CCAACGCCCAGCGCGCGGCTTTCACCTTCGCCTCCGAGCCAGCCGAGGTAGAACCCTCCCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCG < SRR4302532.2100794/94‑1 (MQ=60)
CAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGG < SRR4302532.2515685/94‑1 (MQ=60)
CAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGG > SRR4302532.6314867/1‑94 (MQ=60)
CAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGG > SRR4302532.5809737/1‑94 (MQ=60)
CAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGG > SRR4302532.2975289/1‑94 (MQ=60)
CAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGG > SRR4302532.2177158/1‑94 (MQ=60)
CAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGG > SRR4302532.4091940/1‑94 (MQ=60)
CGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCAT < SRR4302532.2195244/94‑1 (MQ=60)
CGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCAT < SRR4302532.3897484/94‑1 (MQ=60)
CGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATACCGGCAT > SRR4302532.5138266/1‑94 (MQ=60)
CGCCCAGCGCGCGGCCTGTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCAT < SRR4302532.991286/94‑1 (MQ=60)
CCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAAC > SRR4302532.1470735/1‑94 (MQ=60)
CCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAAC > SRR4302532.1809452/1‑94 (MQ=60)
CCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAAC < SRR4302532.4418065/94‑1 (MQ=60)
CAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACC < SRR4302532.2518263/94‑1 (MQ=60)
CAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACC < SRR4302532.2518264/94‑1 (MQ=60)
AGCCCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCG < SRR4302532.3764091/94‑1 (MQ=60)
GCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCAAGGCATCCCGGCATAACAGG > SRR4302532.4774660/1‑94 (MQ=60)
GCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGAT < SRR4302532.1260696/94‑1 (MQ=60)
cgcggccttttacttcccctcccgcCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATC < SRR4302532.2059257/69‑1 (MQ=60)
CGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAGCCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATC < SRR4302532.2340281/94‑1 (MQ=60)
CGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATC < SRR4302532.2937946/94‑1 (MQ=60)
CGCGGCCTTTACCTTCGACGCCCAGCCAGACGAGGGAGAACACTACCTGCTGCCACATTGCGTCCAGGCCCCGGCATCCgcgcacacctcgatc > SRR4302532.1306342/1‑79 (MQ=60)
CGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGC > SRR4302532.245891/1‑94 (MQ=60)
GGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATACCGGCATAACCGGATCGCC > SRR4302532.5429438/1‑94 (MQ=60)
GCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCA > SRR4302532.2056178/1‑94 (MQ=60)
GCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCA < SRR4302532.4955365/94‑1 (MQ=60)
CTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAAA > SRR4302532.5814543/1‑94 (MQ=60)
TTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATA < SRR4302532.4743084/94‑1 (MQ=60)
TTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATA < SRR4302532.3493434/94‑1 (MQ=60)
TTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATA > SRR4302532.4931302/1‑94 (MQ=60)
TTTACCTGCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATA < SRR4302532.3377398/94‑1 (MQ=60)
CCCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAG < SRR4302532.3962773/94‑1 (MQ=60)
ACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCAGCATAACCGGATCGCCAATAACG > SRR4302532.4645732/1‑94 (MQ=60)
ACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCCGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCCATAAAG > SRR4302532.3219690/1‑94 (MQ=60)
ACCTTCGCCGCACAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAG < SRR4302532.3962774/94‑1 (MQ=60)
CCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGT < SRR4302532.3960652/94‑1 (MQ=60)
CCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGT > SRR4302532.990489/1‑94 (MQ=60)
CCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGT < SRR4302532.2062835/94‑1 (MQ=60)
CCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGT < SRR4302532.6262791/94‑1 (MQ=60)
CTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTG < SRR4302532.1032903/94‑1 (MQ=60)
CTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTG < SRR4302532.1462009/94‑1 (MQ=60)
CTCCGCCGCCCACCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTG < SRR4302532.5011525/94‑1 (MQ=60)
GCCACCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCAT < SRR4302532.3309908/94‑1 (MQ=60)
GCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCG > SRR4302532.5971816/1‑94 (MQ=60)
CCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCG < SRR4302532.5317461/94‑1 (MQ=60)
CCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGA > SRR4302532.5238192/1‑94 (MQ=60)
CCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGA > SRR4302532.739901/1‑94 (MQ=60)
CCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAA > SRR4302532.1717619/1‑94 (MQ=60)
AGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGA < SRR4302532.5425133/94‑1 (MQ=60)
AGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGA < SRR4302532.5953811/94‑1 (MQ=60)
CAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACC > SRR4302532.4852984/1‑94 (MQ=60)
CCGAGGTAGAACCCTGCTTGCTGCCACATTGCGTCCAGTCCCACGCATCCGGGCATAGCCGGAATGCCAATAAATTGGCATCCGAAGAACCGCA < SRR4302532.6128104/94‑1 (MQ=36)
CCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACA < SRR4302532.2171790/94‑1 (MQ=60)
CCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACA < SRR4302532.2593005/94‑1 (MQ=60)
AGGTAGAACCCTACCAGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGAT > SRR4302532.2310502/1‑94 (MQ=60)
GGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATC > SRR4302532.2950534/1‑94 (MQ=60)
GTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCC < SRR4302532.955976/94‑1 (MQ=60)
AGACCCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGG < SRR4302532.3556921/94‑1 (MQ=60)
AACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGAT > SRR4302532.1881413/1‑94 (MQ=60)
AACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGAT > SRR4302532.4864291/1‑94 (MQ=60)
ACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATT < SRR4302532.3541324/94‑1 (MQ=60)
ACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCCGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGCATT > SRR4302532.6110520/1‑94 (MQ=60)
CCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGA > SRR4302532.1802405/1‑94 (MQ=60)
ACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGATAT > SRR4302532.3584658/1‑94 (MQ=60)
CCTGCTGCCACATTGCGTCCAGGCACAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGATATC > SRR4302532.5411355/1‑94 (MQ=60)
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GTCGGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCAGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGATATC > NC_000913/1015332‑1015516
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
