Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,015,425 |
A→T |
L90Q (CTG→CAG) |
fabA ← |
beta‑hydroxydecanoyl thioester dehydrase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,015,425 | 0 | A | T | 100.0%
| 937.5
/ NA
| 240 | L90Q (CTG→CAG) | fabA | beta‑hydroxydecanoyl thioester dehydrase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (112/128); total (112/128) |
Only 100 of 252 total aligned reads displayed.
GGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCAGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGATA > NC_000913/1015335‑1015514
|
ggCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGc > 1:3282232/1‑93 (MQ=255)
gCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCt > 2:2331356/1‑93 (MQ=255)
gCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCt < 2:6468010/93‑1 (MQ=255)
cAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACctgctg > 1:1067622/1‑93 (MQ=255)
cAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACctgctg > 2:55684/1‑93 (MQ=255)
aGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCtgctgc > 2:640611/1‑93 (MQ=255)
ccTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCcaca > 1:5075138/1‑93 (MQ=255)
cTGGCCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACAt < 2:4513349/93‑1 (MQ=255)
cTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACAt < 2:1458504/93‑1 (MQ=255)
tGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACAtt > 2:4751142/1‑93 (MQ=255)
gACCAGTGAATTTCCCTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTg < 1:1317817/93‑1 (MQ=255)
gACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTg > 1:150095/1‑93 (MQ=255)
aCCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGc < 1:1655497/93‑1 (MQ=255)
aCCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGc > 2:52053/1‑93 (MQ=255)
ccAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGCAGAAGCCTAGCTGCTGCCACATTGCg > 1:1045184/1‑93 (MQ=255)
cAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGt > 2:5143914/1‑93 (MQ=255)
cAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGt < 1:2709509/93‑1 (MQ=255)
aGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTc > 2:5745749/1‑93 (MQ=255)
aGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTc > 1:6230213/1‑93 (MQ=255)
gTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTcc < 1:5489399/93‑1 (MQ=255)
gTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTcc < 2:6290411/93‑1 (MQ=255)
gTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTcc > 2:4308182/1‑93 (MQ=255)
tGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTcca > 1:1229926/1‑93 (MQ=255)
tGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTcca < 1:6046587/93‑1 (MQ=255)
gAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccag > 1:3141743/1‑93 (MQ=255)
gAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccag < 2:1487301/93‑1 (MQ=255)
ttCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccaggccc < 1:657898/93‑1 (MQ=255)
tCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccaggccca < 1:4077734/93‑1 (MQ=255)
cACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccaggcccag < 2:5970054/93‑1 (MQ=255)
cctccGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccaggcccagg < 2:847245/89‑1 (MQ=255)
cTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTccaggcccaggc > 1:5912451/1‑93 (MQ=255)
tCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCAt < 2:2446815/93‑1 (MQ=255)
cGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATc < 1:5624581/93‑1 (MQ=255)
cGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATc < 2:119327/93‑1 (MQ=255)
gCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATcc > 2:2842680/1‑93 (MQ=255)
gCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATcc < 2:1712575/93‑1 (MQ=255)
ccAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATccc < 1:5965938/93‑1 (MQ=255)
aaCGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGACCCCTACCTGCTGCCACATTGCGTCCAGTCCCAGGCATCCCgg > 1:717386/1‑93 (MQ=255)
aaCGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCgg > 2:1011908/1‑93 (MQ=255)
aCGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGc > 1:4659962/1‑93 (MQ=255)
aCGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGc > 2:4998376/1‑93 (MQ=255)
aCGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGc > 1:1421228/1‑93 (MQ=255)
cGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCa > 2:6066945/1‑93 (MQ=255)
gCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCAt > 1:5216438/1‑93 (MQ=255)
gCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCAt > 2:619433/1‑93 (MQ=255)
ccccGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATa < 1:4406924/93‑1 (MQ=255)
ccAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATaa < 1:4312936/93‑1 (MQ=255)
ccAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATaa < 1:5367648/93‑1 (MQ=255)
aGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAAcc > 1:1815316/1‑93 (MQ=255)
gcgcgcCCTTTACCTCCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGa < 2:3475254/93‑1 (MQ=255)
gcgcgGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGa > 1:6539442/1‑93 (MQ=255)
gcgcgGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGa < 1:1686595/93‑1 (MQ=255)
cgcgGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGAt > 1:2206503/1‑93 (MQ=255)
cgcgGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGAt > 2:1532111/1‑93 (MQ=255)
cgcgGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGAt < 1:1934764/93‑1 (MQ=255)
cgcgGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGAt < 2:3629696/93‑1 (MQ=255)
cgcgGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGAt > 1:1095321/1‑93 (MQ=255)
gCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGcc > 2:5591149/1‑93 (MQ=255)
cTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCaa > 1:4184083/1‑93 (MQ=255)
tttACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAAt > 2:2046361/1‑93 (MQ=255)
ttACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATa > 1:2576095/1‑93 (MQ=255)
tACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATaa > 2:1069114/1‑93 (MQ=255)
cccTGCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATaaa < 1:3806990/92‑1 (MQ=255)
aCCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCGTAACCGGATCGCCAATaaa < 1:6487900/93‑1 (MQ=255)
aCCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATaaa < 2:5869226/93‑1 (MQ=255)
ccTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAg > 1:2481722/1‑93 (MQ=255)
ccTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAg < 1:1162156/93‑1 (MQ=255)
cTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGt < 1:336766/93‑1 (MQ=255)
cTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGt < 1:4751587/93‑1 (MQ=255)
ttCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTg > 1:4454823/1‑93 (MQ=255)
ttCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTg < 1:504749/93‑1 (MQ=255)
cgccCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATc < 2:156117/93‑1 (MQ=255)
cgccCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATc < 2:3132920/93‑1 (MQ=255)
ccagccagCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCga < 2:5729062/93‑1 (MQ=255)
ccagccagCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCga > 1:5093970/1‑93 (MQ=255)
ccagccagCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCga > 2:2027215/1‑93 (MQ=255)
cagccagcCGAGGTAGACCCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCgaa < 1:3607218/93‑1 (MQ=255)
cagccagcCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCgaa < 2:3283344/93‑1 (MQ=255)
agccagccGAGGTAGAACCCTACGTGCTGCCACATTGCGTCCAGGCGCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCgaag > 1:5339272/1‑93 (MQ=255)
ccagccGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCgaagaa > 2:3768246/1‑93 (MQ=255)
ccagccGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCgaagaa < 1:3862176/93‑1 (MQ=255)
agccGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAAcc > 1:2375631/1‑93 (MQ=255)
gccGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACca > 2:3824318/1‑93 (MQ=255)
gccGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACca < 1:3200006/93‑1 (MQ=255)
ccGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACcac < 2:1402207/93‑1 (MQ=255)
ggTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGAt < 1:5801004/93‑1 (MQ=255)
gTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATc < 1:4375273/93‑1 (MQ=255)
tAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATCAAGTGGCATCCGAAGAACCACAGATcc > 1:373125/1‑93 (MQ=255)
tAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATcc < 2:4179907/93‑1 (MQ=255)
tAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATcc < 1:3907409/93‑1 (MQ=255)
aGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCg > 2:5419647/1‑93 (MQ=255)
aGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCg < 2:1747738/93‑1 (MQ=255)
aaCCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGa < 2:3407651/93‑1 (MQ=255)
aCCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGAt > 1:2545707/1‑93 (MQ=255)
cccTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGAtt > 2:1853935/1‑93 (MQ=255)
cccTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGAtt < 2:1249187/93‑1 (MQ=255)
cccTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGAtt > 1:4009605/1‑93 (MQ=255)
cTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGa < 2:6508074/93‑1 (MQ=255)
aCCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGata > 1:661322/1‑93 (MQ=255)
aCCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATACGGATTGata > 2:2506802/1‑93 (MQ=255)
|
GGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCAGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGATA > NC_000913/1015335‑1015514
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTCGGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCAGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGATATCC > NC_000913/1015332‑1015517
|
GTCGGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCT < SRR4302547.817794/94‑1 (MQ=60)
TCGGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTG > SRR4302547.5372071/1‑94 (MQ=60)
TCGGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGCAGAACCCTACCTG < SRR4302547.5225690/94‑1 (MQ=60)
CGGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGC > SRR4302547.3348035/1‑94 (MQ=60)
CGGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGC < SRR4302547.1854593/94‑1 (MQ=60)
CGGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGC < SRR4302547.6057369/94‑1 (MQ=60)
GGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCT < SRR4302547.3763271/94‑1 (MQ=60)
GCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTG > SRR4302547.3264278/1‑94 (MQ=60)
GCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTG > SRR4302547.1088878/1‑94 (MQ=60)
CAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGC > SRR4302547.1102750/1‑94 (MQ=60)
AGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCC > SRR4302547.7108/1‑94 (MQ=60)
GTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCA < SRR4302547.5356073/94‑1 (MQ=60)
ACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACA > SRR4302547.5179837/1‑94 (MQ=60)
CCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACAT < SRR4302547.6729214/94‑1 (MQ=60)
TGACCAGTGAATTTCCCTGCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTG < SRR4302547.2476254/94‑1 (MQ=60)
TGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTG < SRR4302547.3292864/94‑1 (MQ=60)
TGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTG < SRR4302547.2034746/94‑1 (MQ=60)
TGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTG > SRR4302547.152832/1‑94 (MQ=60)
GACCAGTGAATTTCCCTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGC < SRR4302547.1344298/94‑1 (MQ=60)
ACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCG < SRR4302547.1688155/94‑1 (MQ=60)
ACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGCAGAAGCCTAGCTGCTGCCACATTGCG > SRR4302547.1065828/1‑94 (MQ=60)
CCAGTGAATTTCACTCCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGT < SRR4302547.2493744/94‑1 (MQ=60)
CAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTC > SRR4302547.4097716/1‑94 (MQ=60)
CAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTC > SRR4302547.6359621/1‑94 (MQ=60)
CAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTC < SRR4302547.2763909/94‑1 (MQ=60)
GTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCA < SRR4302547.5602758/94‑1 (MQ=60)
GTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCA > SRR4302547.1254737/1‑94 (MQ=60)
TGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAG < SRR4302547.4492197/94‑1 (MQ=60)
TGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAG < SRR4302547.4447179/94‑1 (MQ=60)
TGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAG < SRR4302547.6049879/94‑1 (MQ=60)
TGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAG < SRR4302547.6172038/94‑1 (MQ=60)
TGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAG < SRR4302547.3226103/94‑1 (MQ=60)
TGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAG > SRR4302547.3204156/1‑94 (MQ=60)
GAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGG > SRR4302547.226876/1‑94 (MQ=60)
GAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGG > SRR4302547.143352/1‑94 (MQ=60)
AATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGC > SRR4302547.400683/1‑94 (MQ=60)
AATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGC > SRR4302547.3828000/1‑94 (MQ=60)
AATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGC > SRR4302547.6118663/1‑94 (MQ=60)
AATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGC < SRR4302547.2626972/94‑1 (MQ=60)
AATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGC < SRR4302547.1882116/94‑1 (MQ=60)
TTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCA < SRR4302547.670016/94‑1 (MQ=60)
TCTCTTCGCCACCGCCCAGCGCACTGCCTTTACCTTCGCCACCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAG < SRR4302547.5301429/94‑1 (MQ=60)
TCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAG < SRR4302547.4160591/94‑1 (MQ=60)
CACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGG > SRR4302547.3605371/1‑94 (MQ=60)
ACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGC > SRR4302547.5190021/1‑94 (MQ=60)
ACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGC > SRR4302547.6034916/1‑94 (MQ=60)
CTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCA < SRR4302547.1404551/94‑1 (MQ=60)
CGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCC < SRR4302547.5156066/94‑1 (MQ=60)
CGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCC < SRR4302547.5740651/94‑1 (MQ=60)
CCAACGCCCAGCGCGCGGCCTTTCCCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCG < SRR4302547.3971043/94‑1 (MQ=60)
CCAACGCCCAGCGCGCGGCCTTTACCTTCTCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCG < SRR4302547.6664905/94‑1 (MQ=60)
CCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCG < SRR4302547.4346602/94‑1 (MQ=60)
CCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCG < SRR4302547.6089671/94‑1 (MQ=60)
CAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGACCCCTACCTGCTGCCACATTGCGTCCAGTCCCAGGCATCCCGG > SRR4302547.730682/1‑94 (MQ=60)
CAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGG > SRR4302547.59107/1‑94 (MQ=60)
CAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGG > SRR4302547.3918838/1‑94 (MQ=60)
CAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGG < SRR4302547.5527918/94‑1 (MQ=60)
AACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGC > SRR4302547.6030313/1‑94 (MQ=60)
AACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGC > SRR4302547.4756473/1‑94 (MQ=60)
AACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGC < SRR4302547.6029310/94‑1 (MQ=60)
AACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGC > SRR4302547.5156569/1‑94 (MQ=60)
AACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGC > SRR4302547.654288/1‑94 (MQ=60)
AACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGC > SRR4302547.772892/1‑94 (MQ=60)
AACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGC > SRR4302547.2002103/1‑94 (MQ=60)
AACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGC > SRR4302547.1449677/1‑94 (MQ=60)
AACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGC > SRR4302547.1208755/1‑94 (MQ=60)
CGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCAT < SRR4302547.3570375/94‑1 (MQ=60)
CGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCAT > SRR4302547.5323807/1‑94 (MQ=60)
CGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGGAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCAT > SRR4302547.453221/1‑94 (MQ=60)
GCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATA > SRR4302547.4414899/1‑94 (MQ=60)
CCCCGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAA < SRR4302547.4497740/94‑1 (MQ=60)
CCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAAC > SRR4302547.1482024/1‑94 (MQ=60)
CCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAAC > SRR4302547.4224961/1‑94 (MQ=60)
CCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAAC < SRR4302547.4401685/94‑1 (MQ=60)
CCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAAC < SRR4302547.5478421/94‑1 (MQ=60)
CAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACC > SRR4302547.1851182/1‑94 (MQ=60)
CAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACC < SRR4302547.319513/94‑1 (MQ=60)
AGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCG < SRR4302547.1761550/94‑1 (MQ=60)
GCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGG < SRR4302547.4070091/94‑1 (MQ=60)
CGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGA > SRR4302547.6675525/1‑94 (MQ=60)
GCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGAT > SRR4302547.2250845/1‑94 (MQ=60)
GCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGAT < SRR4302547.1719781/94‑1 (MQ=60)
GCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGAT > SRR4302547.1117290/1‑94 (MQ=60)
CGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATC < SRR4302547.1973135/94‑1 (MQ=60)
CGCGGCCTTTACCTTCGCCGCCCACCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATC < SRR4302547.5459601/94‑1 (MQ=60)
GCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCG > SRR4302547.6355762/1‑94 (MQ=60)
GCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCG < SRR4302547.3365454/94‑1 (MQ=60)
CGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGC < SRR4302547.1117893/94‑1 (MQ=60)
GGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCC > SRR4302547.4772184/1‑94 (MQ=60)
CCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAA > SRR4302547.4269367/1‑94 (MQ=60)
CTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAAT > SRR4302547.1615694/1‑94 (MQ=60)
TTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATA > SRR4302547.2628082/1‑94 (MQ=60)
ccctgCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAG < SRR4302547.3884593/89‑1 (MQ=60)
ACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCGTAACCGGATCGCCAATAAAG < SRR4302547.6622970/94‑1 (MQ=60)
ACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAG < SRR4302547.4519652/94‑1 (MQ=60)
ACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAG > SRR4302547.390236/1‑94 (MQ=60)
ACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAG > SRR4302547.2531877/1‑94 (MQ=60)
CCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGT < SRR4302547.1185660/94‑1 (MQ=60)
CTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCTAATAAAGTG < SRR4302547.6640538/94‑1 (MQ=60)
CTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTG < SRR4302547.4850052/94‑1 (MQ=60)
CTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTG < SRR4302547.343030/94‑1 (MQ=60)
CTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTG > SRR4302547.4546911/1‑94 (MQ=60)
CTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTG < SRR4302547.6690503/94‑1 (MQ=60)
TTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGG < SRR4302547.513927/94‑1 (MQ=60)
CGCCTCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCA < SRR4302547.47724/94‑1 (MQ=60)
CGCCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCC < SRR4302547.108929/94‑1 (MQ=60)
CCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGA > SRR4302547.6731814/1‑94 (MQ=60)
CCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGA > SRR4302547.844275/1‑94 (MQ=60)
CCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGA < SRR4302547.6504577/94‑1 (MQ=60)
CCCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGA > SRR4302547.5199021/1‑94 (MQ=60)
CCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAA < SRR4302547.1677873/94‑1 (MQ=60)
CCAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAA > SRR4302547.6103375/1‑94 (MQ=60)
CAGCCAGCCGAGGTAGACCCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAG < SRR4302547.3680778/94‑1 (MQ=60)
CAGCCAGCCGAGGTAGAACCCTACGTGCTGCCACATTGCGTCCAGGCGCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAG > SRR4302547.5449331/1‑94 (MQ=60)
CAGCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAG < SRR4302547.1325615/94‑1 (MQ=60)
GCCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAA > SRR4302547.1691497/1‑94 (MQ=60)
CCAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAAC < SRR4302547.3940762/94‑1 (MQ=60)
CAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACC > SRR4302547.2423761/1‑94 (MQ=60)
CAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACC < SRR4302547.4215306/94‑1 (MQ=60)
CAGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACA > SRR4302547.2603243/1‑94 (MQ=60)
AGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCA < SRR4302547.4893990/94‑1 (MQ=60)
AGCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCA > SRR4302547.1727505/1‑94 (MQ=60)
GCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCAC < SRR4302547.4605214/94‑1 (MQ=60)
GCCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCAC < SRR4302547.3263803/94‑1 (MQ=60)
CCGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACA < SRR4302547.1019187/94‑1 (MQ=60)
CGAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAG < SRR4302547.1199953/94‑1 (MQ=60)
GAGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGA > SRR4302547.3066070/1‑94 (MQ=60)
AGGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGAT > SRR4302547.5705169/1‑94 (MQ=60)
GGTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATC < SRR4302547.5921014/94‑1 (MQ=60)
GTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATCAAGTGGCATCCGAAGAACCACAGATCC > SRR4302547.380038/1‑94 (MQ=60)
GTAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCC < SRR4302547.4465182/94‑1 (MQ=60)
TAGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCG < SRR4302547.3986873/94‑1 (MQ=60)
AGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGG < SRR4302547.2593003/94‑1 (MQ=60)
AGAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGG < SRR4302547.5661471/94‑1 (MQ=60)
GAACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGA > SRR4302547.3874662/1‑94 (MQ=60)
AACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGAT > SRR4302547.2597119/1‑94 (MQ=60)
ACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATT > SRR4302547.4091102/1‑94 (MQ=60)
ACCCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATT < SRR4302547.5270603/94‑1 (MQ=60)
CCTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGA > SRR4302547.271485/1‑94 (MQ=60)
CTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGAT > SRR4302547.1072953/1‑94 (MQ=60)
CTACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGAT > SRR4302547.5475561/1‑94 (MQ=60)
TACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGATA > SRR4302547.673499/1‑94 (MQ=60)
ACCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGATAT > SRR4302547.3467490/1‑94 (MQ=60)
CCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGATATC < SRR4302547.4761904/94‑1 (MQ=60)
CCTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGATATC > SRR4302547.2753581/1‑94 (MQ=60)
CTGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCAGATTGATATCC > SRR4302547.1411152/1‑94 (MQ=60)
|
GTCGGCAGTACCTGACCAGTGAATTTCACTTCGCCAACGCCCAGCGCGCGGCCTTTACCTTCGCCGCCCAGCCAGCCGAGGTAGAACCCTACCAGCTGCCACATTGCGTCCAGGCCCAGGCATCCCGGCATAACCGGATCGCCAATAAAGTGGCATCCGAAGAACCACAGATCCGGATTGATATCC > NC_000913/1015332‑1015517
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
