Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,722,918 |
T→A |
N247Y (AAC→TAC) |
b1647 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,722,918 | 0 | T | A | 100.0%
| 647.3
/ NA
| 174 | N247Y (AAC→TAC) | b1647 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (82/92); total (82/92) |
Only 100 of 189 total aligned reads displayed.
TTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTTAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACA > NC_000913/1722828‑1723007
|
tttCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTaaa > 1:5554096/1‑93 (MQ=255)
tttCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTaaa > 1:864909/1‑93 (MQ=255)
tCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAacc < 1:5420879/93‑1 (MQ=255)
cTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAacca < 1:669761/93‑1 (MQ=255)
cTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAacca > 1:4685315/1‑93 (MQ=255)
cTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAacca < 1:4953606/93‑1 (MQ=255)
tcTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAaccacc < 1:4499663/92‑1 (MQ=255)
gCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAaccacc < 1:2817085/93‑1 (MQ=255)
gCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAaccacc < 1:5261583/93‑1 (MQ=255)
gCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAaccacc < 1:1530772/93‑1 (MQ=255)
tCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGt > 1:4255727/1‑93 (MQ=255)
tCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGt < 2:5131296/93‑1 (MQ=255)
cGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGtt < 2:5448301/93‑1 (MQ=255)
gACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTc < 2:2807876/93‑1 (MQ=255)
aGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAAt > 1:30174/1‑93 (MQ=255)
gCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATc > 2:5501146/1‑93 (MQ=255)
gCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATc > 1:2249782/1‑93 (MQ=255)
gCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATc > 2:1553118/1‑93 (MQ=255)
gCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATc > 2:483518/1‑93 (MQ=255)
gCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATc < 1:1414570/93‑1 (MQ=255)
tGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGa < 2:3506723/93‑1 (MQ=255)
ccGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGcc < 2:203590/93‑1 (MQ=255)
cGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGccc > 2:5007862/1‑93 (MQ=255)
cGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGccc < 2:587405/93‑1 (MQ=255)
cGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGccc > 2:4992192/1‑93 (MQ=255)
cGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGccc > 2:5273278/1‑93 (MQ=255)
cGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGccc < 2:531752/93‑1 (MQ=255)
gTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGcccc > 1:5732306/1‑92 (MQ=255)
gTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCcg < 2:3734187/93‑1 (MQ=255)
tACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCcgc > 2:5414456/1‑93 (MQ=255)
tACCCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGTTGGTAAAAGTAATACCCAGGCGTAAACCACCTGTTCCATCGTCCCcgc > 1:341326/1‑93 (MQ=255)
aCGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCcgcg > 2:691777/1‑93 (MQ=255)
gcgcTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCTAGCCGGCGtt > 2:3924457/1‑93 (MQ=255)
gcTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTa > 2:5089982/1‑93 (MQ=255)
tCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAc > 2:3292540/1‑93 (MQ=255)
aaTTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActc > 1:2851794/1‑93 (MQ=255)
ttttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcct < 1:4421847/93‑1 (MQ=255)
ttttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcct > 1:2548651/1‑93 (MQ=255)
ttttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcct > 1:1163829/1‑93 (MQ=255)
ttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcctcg > 2:855621/1‑92 (MQ=255)
ttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCctct > 1:391598/1‑93 (MQ=255)
ttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCctct < 2:2688757/93‑1 (MQ=255)
cTGAAGCGATAATTGGCCGCGGCTGCGATGGTAAACGTAATCCCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGcca < 2:5545716/93‑1 (MQ=255)
cTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACAACCTGTTCAATCGAGCCCGAGTTTAACTACTCTgacc > 1:1463842/1‑90 (MQ=255)
aaCCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCACGCGTTTAACTCCTCTGccacca > 1:1042480/1‑93 (MQ=255)
aCCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCcaccac > 2:4163877/1‑93 (MQ=255)
ccGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCTATCGAGCCCGCGTTTAACTCCTCTGCCACcaca > 2:5925442/1‑93 (MQ=255)
ccGATAATTGGCAGCGGCTACGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACcaca < 2:3840675/93‑1 (MQ=255)
gATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGc > 2:4737212/1‑93 (MQ=255)
gATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGc < 2:5828131/93‑1 (MQ=255)
aTAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGcc < 2:3076723/93‑1 (MQ=255)
tAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCa < 2:1152293/93‑1 (MQ=255)
tAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCa > 2:5390769/1‑93 (MQ=255)
tAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCa < 2:1400489/93‑1 (MQ=255)
tAATGGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCATAGCCa < 1:3892314/93‑1 (MQ=255)
atgggCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGt < 1:2321511/90‑1 (MQ=255)
aTTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGt > 1:2373462/1‑93 (MQ=255)
aTTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGt > 2:2243551/1‑93 (MQ=255)
ttGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGtt < 2:5426963/93‑1 (MQ=255)
gtGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGtt < 1:3990883/92‑1 (MQ=255)
ggCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtca < 2:4303913/93‑1 (MQ=255)
gCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtcat > 2:1906320/1‑93 (MQ=255)
cAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtcatc < 1:2607311/93‑1 (MQ=255)
aGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtcatca < 1:1317745/93‑1 (MQ=255)
gCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCAc < 2:506162/93‑1 (MQ=255)
ggCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGc < 1:4303887/93‑1 (MQ=255)
gCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCa > 1:3275513/1‑93 (MQ=255)
gCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCa < 2:4817026/93‑1 (MQ=255)
gCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTGCAATCGAGCCCGCGTTTAACTCCTCGGCCACCACAGCCAGTTCATCACGCa < 1:3567231/93‑1 (MQ=255)
cTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAg > 2:158620/1‑93 (MQ=255)
cTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAg < 2:4568669/93‑1 (MQ=255)
cTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAg > 2:3131291/1‑93 (MQ=255)
tGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGc < 1:3815389/93‑1 (MQ=255)
gCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCg > 2:4121398/1‑93 (MQ=255)
gCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCg < 1:3427804/93‑1 (MQ=255)
cGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCgg > 2:534998/1‑93 (MQ=255)
gATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGc > 2:4259005/1‑93 (MQ=255)
gATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGc < 2:6131141/93‑1 (MQ=255)
aTGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCt > 1:6067120/1‑93 (MQ=255)
aTGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCt < 1:2673164/93‑1 (MQ=255)
ggTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTgg > 1:5443894/1‑93 (MQ=255)
ggTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTgg < 2:295534/93‑1 (MQ=255)
gTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGa > 2:1670496/1‑93 (MQ=255)
gTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGa < 2:2436798/93‑1 (MQ=255)
tAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGaa < 2:5610053/93‑1 (MQ=255)
aCGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAaata > 2:1463881/1‑93 (MQ=255)
aaTACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatca < 1:4155748/93‑1 (MQ=255)
aaTACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatca < 2:2217027/93‑1 (MQ=255)
aTACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatcat > 1:5101151/1‑93 (MQ=255)
tccccAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatcatc < 1:1866254/91‑1 (MQ=255)
tACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatcatc > 2:4614899/1‑93 (MQ=255)
tACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatcata > 1:4899285/1‑92 (MQ=255)
aCCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAAtcatca < 1:787886/93‑1 (MQ=255)
cccAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATcatcat < 2:3396417/93‑1 (MQ=255)
aGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTaa > 1:1634592/1‑93 (MQ=255)
aGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTaa > 2:1970871/1‑93 (MQ=255)
ggCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTaaa < 2:1849916/93‑1 (MQ=255)
ggCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTaaa < 2:760188/93‑1 (MQ=255)
cGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACa < 2:4034845/93‑1 (MQ=255)
cGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACa < 1:3349356/93‑1 (MQ=255)
|
TTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTTAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACA > NC_000913/1722828‑1723007
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGTTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTTAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGAC > NC_000913/1722826‑1723010
|
TGTTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAA < SRR4302532.5747630/94‑1 (MQ=60)
GTTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAA > SRR4302532.894573/1‑94 (MQ=60)
GTTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAA > SRR4302532.5746915/1‑94 (MQ=60)
TTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAAC > SRR4302532.1499468/1‑94 (MQ=60)
TTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAAC < SRR4302532.6086317/94‑1 (MQ=60)
TTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCCGGCGTAAACC > SRR4302532.5122699/1‑94 (MQ=60)
TCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACTCAGGCGTAAACCA > SRR4302532.6353174/1‑94 (MQ=60)
TCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCA > SRR4302532.4845114/1‑94 (MQ=60)
TCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCA < SRR4302532.5608763/94‑1 (MQ=60)
CTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCAC > SRR4302532.5177617/1‑94 (MQ=60)
CTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCAC < SRR4302532.5123557/94‑1 (MQ=60)
CTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCAC < SRR4302532.692858/94‑1 (MQ=60)
CTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGCAAACGTAAGACCCAGGCGTAAAGCAC > SRR4302532.1379194/1‑94 (MQ=60)
TCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCT < SRR4302532.4653279/94‑1 (MQ=60)
GCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCT < SRR4302532.1582489/94‑1 (MQ=60)
GCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCT < SRR4302532.2911375/94‑1 (MQ=60)
GCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCT < SRR4302532.5443032/94‑1 (MQ=60)
TTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGT > SRR4302532.4398830/1‑94 (MQ=60)
TCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTT < SRR4302532.4566718/94‑1 (MQ=60)
GACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCA > SRR4302532.4645313/1‑94 (MQ=60)
CAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAAT > SRR4302532.31322/1‑94 (MQ=60)
AGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATC > SRR4302532.2324476/1‑94 (MQ=60)
AGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATC < SRR4302532.497531/94‑1 (MQ=60)
GCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCG < SRR4302532.1462032/94‑1 (MQ=60)
CTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCACTCGA < SRR4302532.5355812/94‑1 (MQ=60)
GCCCGTACGCGCTCAATTTTACCTGAACCTATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGC < SRR4302532.2340841/94‑1 (MQ=60)
CCGTACGCGTTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGCTCACGTAAAACCCAGTCGTAAACCATCTGTTCAATCGAGCCC > SRR4302532.5650379/1‑94 (MQ=60)
CGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCG < SRR4302532.3998374/94‑1 (MQ=60)
CGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCC > SRR4302532.5931922/1‑94 (MQ=60)
GTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAGCCACCTGTTCAATCGACCCCGC > SRR4302532.4340698/1‑94 (MQ=60)
GTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGC > SRR4302532.353170/1‑94 (MQ=60)
GTACCCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGTTGGTAAAAGTAATACCCAGGCGTAAACCACCTGTTCCATCGTCCCCGC > SRR4302532.353169/1‑94 (MQ=60)
TACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCG < SRR4302532.3003048/94‑1 (MQ=60)
TACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCG < SRR4302532.1348055/94‑1 (MQ=60)
CGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTA > SRR4302532.3289598/1‑94 (MQ=60)
CAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTC > SRR4302532.2947136/1‑94 (MQ=60)
CAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTC > SRR4302532.2947137/1‑94 (MQ=60)
CAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTC > SRR4302532.2637945/1‑94 (MQ=60)
ATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCT > SRR4302532.1202702/1‑94 (MQ=60)
ATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCT > SRR4302532.2633654/1‑94 (MQ=60)
TTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTC < SRR4302532.4572471/94‑1 (MQ=60)
TTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCT < SRR4302532.6328790/94‑1 (MQ=60)
TTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCT > SRR4302532.405297/1‑94 (MQ=60)
TTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCT < SRR4302532.340626/94‑1 (MQ=60)
CCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACAACCTGTTCAATCGAGCCCGAGTTTAACTACTCTGacc > SRR4302532.1513163/1‑91 (MQ=60)
CTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCAC > SRR4302532.1520327/1‑94 (MQ=60)
TGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACC > SRR4302532.2298561/1‑94 (MQ=60)
GAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCACGCGTTTAACTCCTCTGCCACCA > SRR4302532.1077634/1‑94 (MQ=60)
AACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCAC > SRR4302532.2877300/1‑94 (MQ=60)
CGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTGCAATCGAGCCTGCGTTTAACTCCTCTTCCACCACAGC > SRR4302532.5501720/1‑94 (MQ=60)
TAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAG > SRR4302532.4669756/1‑94 (MQ=60)
TAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAG < SRR4302532.4023625/94‑1 (MQ=60)
TAATGGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCATAGCCAG < SRR4302532.4023624/94‑1 (MQ=60)
AATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGT > SRR4302532.2452588/1‑94 (MQ=60)
ATTGGCAGCGGCTGCGATGGGAAACGTAATAACCAGGCGTACACCACCTGTTCAATCGAGCGCGCGTTTtacttctctggccccatctccagtt > SRR4302532.5585502/1‑69 (MQ=56)
ATGGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTT < SRR4302532.2398769/94‑1 (MQ=60)
GTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTC < SRR4302532.4125320/94‑1 (MQ=60)
GCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATC > SRR4302532.4160737/1‑94 (MQ=60)
CAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCA > SRR4302532.1622612/1‑94 (MQ=60)
CAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCA < SRR4302532.2694508/94‑1 (MQ=60)
AGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCAC < SRR4302532.1361793/94‑1 (MQ=60)
AGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCAC > SRR4302532.872871/1‑94 (MQ=60)
GGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCA > SRR4302532.3384441/1‑94 (MQ=60)
GGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCA < SRR4302532.4449395/94‑1 (MQ=60)
GCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAG < SRR4302532.3686599/94‑1 (MQ=60)
GCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTGCAATCGAGCCCGCGTTTAACTCCTCGGCCACCACAGCCAGTTCATCACGCAG < SRR4302532.3686600/94‑1 (MQ=60)
CTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCCCGTCTAACTCCTCTGCCACTACAGCCAGTTCATCAAGCAAC > SRR4302532.1900753/1‑94 (MQ=60)
TGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCG < SRR4302532.2728408/94‑1 (MQ=60)
TGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCG < SRR4302532.3944194/94‑1 (MQ=60)
GCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAATTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGG < SRR4302532.5896528/94‑1 (MQ=60)
GCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGG < SRR4302532.3542650/94‑1 (MQ=60)
GATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCT > SRR4302532.6276652/1‑94 (MQ=60)
ATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTG < SRR4302532.2762886/94‑1 (MQ=60)
ATGGTAAACGTAATACCCAGACGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTG > SRR4302532.412194/1‑94 (MQ=60)
TGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGG > SRR4302532.5632555/1‑94 (MQ=60)
GGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGA > SRR4302532.777365/1‑94 (MQ=60)
GTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATC > SRR4302532.1387218/1‑94 (MQ=60)
GTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATC < SRR4302532.3835621/94‑1 (MQ=60)
AATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCAT < SRR4302532.4295156/94‑1 (MQ=60)
AATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCAT > SRR4302532.5276532/1‑94 (MQ=60)
ATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATA > SRR4302532.5067656/1‑94 (MQ=60)
TCCCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCA < SRR4302532.1928089/94‑1 (MQ=60)
TACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCA < SRR4302532.2471726/94‑1 (MQ=60)
ACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCAT < SRR4302532.814914/94‑1 (MQ=60)
CAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAA > SRR4302532.1689913/1‑94 (MQ=60)
GGCGTAACCCGCCTGTTCAAGCGACCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAAC < SRR4302532.5595845/94‑1 (MQ=60)
CGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAG < SRR4302532.3461181/94‑1 (MQ=60)
TAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGAC < SRR4302532.5031869/94‑1 (MQ=60)
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TGTTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTTAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGAC > NC_000913/1722826‑1723010
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
