Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,722,918 |
T→A |
N247Y (AAC→TAC) |
b1647 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,722,918 | 0 | T | A | 100.0%
| 802.6
/ NA
| 209 | N247Y (AAC→TAC) | b1647 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (111/98); total (111/98) |
Only 100 of 220 total aligned reads displayed.
TTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTTAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACA > NC_000913/1722828‑1723007
|
tttCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTaaa > 2:332664/1‑93 (MQ=255)
ttCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAac < 2:5157394/93‑1 (MQ=255)
ttCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAac > 1:5777191/1‑93 (MQ=255)
ttCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAac < 2:6216284/93‑1 (MQ=255)
tGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAaccac > 2:1594041/1‑93 (MQ=255)
gCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAaccacc < 2:1125976/93‑1 (MQ=255)
gCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAaccacc < 1:243937/93‑1 (MQ=255)
cTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCt < 1:3039233/93‑1 (MQ=255)
cTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCt > 1:4947626/1‑93 (MQ=255)
cTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGGAATACCCAGGCGTAAACCACCt > 2:5497979/1‑93 (MQ=255)
ttCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTg < 1:1319862/93‑1 (MQ=255)
ttCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTg < 2:4878810/93‑1 (MQ=255)
tCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGt < 1:4689908/93‑1 (MQ=255)
tCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGt > 1:5521812/1‑93 (MQ=255)
gACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCCGGCGTCAACCACCTGTTc > 1:1735675/1‑93 (MQ=255)
aCAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCa > 2:1070640/1‑93 (MQ=255)
aGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAAt < 1:3643281/93‑1 (MQ=255)
aGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAAt > 2:3571315/1‑93 (MQ=255)
tGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGa > 1:5024782/1‑93 (MQ=255)
tGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGa < 2:6503066/93‑1 (MQ=255)
gCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAAGCGTAAACCACCTGTTCAATCGAg > 2:6059760/1‑93 (MQ=255)
gTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCGCCTGTTCAATCGAGCCcg < 1:1514800/93‑1 (MQ=255)
gTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCcg > 1:4410584/1‑93 (MQ=255)
tACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCcgc < 1:5291322/93‑1 (MQ=255)
tACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCcgc > 2:5636798/1‑93 (MQ=255)
cgcgCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGt < 1:6305799/93‑1 (MQ=255)
gcgcTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGtt < 1:1623849/93‑1 (MQ=255)
cgcTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGttt > 1:6646500/1‑93 (MQ=255)
gcTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTa > 2:1446308/1‑93 (MQ=255)
cTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTaa > 2:4473214/1‑93 (MQ=255)
tCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAc < 1:4155759/93‑1 (MQ=255)
tCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAc > 1:3021536/1‑93 (MQ=255)
cAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAct > 1:5177293/1‑93 (MQ=255)
aaTTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActc < 2:5815568/93‑1 (MQ=255)
aaTTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAccc < 1:6548142/93‑3 (MQ=255)
aTTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcc > 2:4227543/1‑93 (MQ=255)
aTTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcc < 1:2682631/93‑1 (MQ=255)
ttttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcct < 2:1474785/93‑1 (MQ=255)
ttttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcct > 2:2953162/1‑93 (MQ=255)
ttttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcct > 2:416379/1‑93 (MQ=255)
tttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcctc > 2:4194661/1‑93 (MQ=255)
tttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcctc < 1:1165694/93‑1 (MQ=255)
tttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcctc < 1:2589752/93‑1 (MQ=255)
tgaCCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCctct > 1:3464623/3‑93 (MQ=255)
tACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTg > 2:2130512/1‑93 (MQ=255)
ccTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCTGCGTTTAACTCCTCTGcc > 1:1037416/1‑93 (MQ=255)
cTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGcca > 1:3151655/1‑93 (MQ=255)
gAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGccacc > 1:4649360/1‑93 (MQ=255)
cGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAg < 1:6390791/93‑1 (MQ=255)
gATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGc > 1:1281983/1‑93 (MQ=255)
gATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGc > 2:5405473/1‑93 (MQ=255)
gATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGc > 2:6111778/1‑93 (MQ=255)
gATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGc < 2:3968957/93‑1 (MQ=255)
gATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGc > 2:2404263/1‑93 (MQ=255)
aTAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGcc < 2:725213/93‑1 (MQ=255)
aTAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGcc < 2:2237390/93‑1 (MQ=255)
aTAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGcc < 2:4072521/93‑1 (MQ=255)
tAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCa > 2:2519637/1‑93 (MQ=255)
tAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCa < 2:3673229/93‑1 (MQ=255)
tAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGAGTTTAACTCCTCTGCCACCACAGCCa > 1:4237450/1‑93 (MQ=255)
tAATGGGCAGCGGCTGCGAGGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCa < 1:874413/93‑1 (MQ=255)
ttGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGtt < 2:4862385/93‑1 (MQ=255)
ttGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGtt < 2:6270793/93‑1 (MQ=255)
ttGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGtt > 2:4314927/1‑93 (MQ=255)
ttGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGtt < 2:573516/93‑1 (MQ=255)
tgtcAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtc < 2:5897632/90‑1 (MQ=255)
ggCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtca < 2:2292645/93‑1 (MQ=255)
gCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtcat > 1:5505973/1‑93 (MQ=255)
cAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtcatc < 2:1361884/93‑1 (MQ=255)
cAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtcatc < 1:2357426/93‑1 (MQ=255)
cAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtcatc < 1:5820589/93‑1 (MQ=255)
aGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtcatca < 1:1964553/93‑1 (MQ=255)
gCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCAc > 2:1712040/1‑93 (MQ=255)
gCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCAc > 2:1321304/1‑93 (MQ=255)
gCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCAc < 1:4016831/93‑1 (MQ=255)
ggCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGc < 2:1795262/93‑1 (MQ=255)
gCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCa < 1:492132/93‑1 (MQ=255)
tGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGc > 1:1547310/1‑93 (MQ=255)
cGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCgg > 1:2810057/1‑93 (MQ=255)
gATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGc < 1:6070287/93‑1 (MQ=255)
tGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTg < 1:2168529/93‑1 (MQ=255)
ggTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTgg > 2:238351/1‑93 (MQ=255)
aaaCGTAATACCCAGGCTTAACCCCCCTGTTCAATCGAGCCCGCTTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGaaa < 1:2721747/93‑1 (MQ=255)
aaCGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAaat > 1:1159594/1‑93 (MQ=255)
gTAATACCCAGGCGTAAACCCCCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAaataat < 2:4844491/93‑1 (MQ=255)
ctAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAaataat < 2:1965311/92‑1 (MQ=255)
tAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatc > 2:223232/1‑93 (MQ=255)
tAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatc > 2:5298411/1‑93 (MQ=255)
tAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatc < 2:3902079/93‑1 (MQ=255)
aTACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatcat < 1:3931207/93‑1 (MQ=255)
aTACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatcat > 1:563787/1‑93 (MQ=255)
tACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatcatc > 1:4269028/1‑93 (MQ=255)
aCCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAAtcatca < 2:46826/93‑1 (MQ=255)
aCCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAAtcatca < 1:1871223/93‑1 (MQ=255)
aCCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAAtcatca > 1:181771/1‑93 (MQ=255)
cccAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATcatcat < 1:2311998/93‑1 (MQ=255)
cccAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATcatcat > 1:4195222/1‑93 (MQ=255)
cGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACa > 1:3801936/1‑93 (MQ=255)
cGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACa < 2:6559081/93‑1 (MQ=255)
cGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACa < 2:2760304/93‑1 (MQ=255)
|
TTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTTAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACA > NC_000913/1722828‑1723007
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGTTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTTAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGACG > NC_000913/1722826‑1723011
|
TGTTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAA > SRR4302547.4025167/1‑94 (MQ=60)
TGTTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAA > SRR4302547.285833/1‑94 (MQ=60)
TTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAAC > SRR4302547.5896681/1‑94 (MQ=60)
TTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACC < SRR4302547.6582525/94‑1 (MQ=60)
GCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCT < SRR4302547.2949671/94‑1 (MQ=60)
GCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCT > SRR4302547.5050085/1‑94 (MQ=60)
GCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCT < SRR4302547.248491/94‑1 (MQ=60)
GCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCT > SRR4302547.6167121/1‑94 (MQ=60)
CTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTG < SRR4302547.3099715/94‑1 (MQ=60)
TTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGT < SRR4302547.3210709/94‑1 (MQ=60)
TTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGT < SRR4302547.1346394/94‑1 (MQ=60)
TTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGT > SRR4302547.5635790/1‑94 (MQ=60)
TTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCCATAATTGGCAGCGGCTGCGATGGGACACGGAATACACAGGCGTAAAACACCTCT > SRR4302547.5315536/1‑94 (MQ=60)
TCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTT < SRR4302547.4787038/94‑1 (MQ=60)
TCGACAGCCGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTT < SRR4302547.4683864/94‑1 (MQ=60)
CGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCCGGCGTCAACCACCTGTTC > SRR4302547.1769774/1‑94 (MQ=60)
CGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTC > SRR4302547.5627256/1‑94 (MQ=60)
GACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCA > SRR4302547.5925800/1‑94 (MQ=60)
ACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAA > SRR4302547.2402134/1‑94 (MQ=60)
CAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAAT < SRR4302547.1548411/94‑1 (MQ=60)
CAGCTGCACGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAAT > SRR4302547.5638046/1‑94 (MQ=60)
AGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATC < SRR4302547.3717591/94‑1 (MQ=60)
CTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGA > SRR4302547.5128600/1‑94 (MQ=60)
CTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGA > SRR4302547.3836921/1‑94 (MQ=60)
GCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGC > SRR4302547.30877/1‑94 (MQ=60)
GCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGC > SRR4302547.391454/1‑94 (MQ=60)
GCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGC < SRR4302547.165020/94‑1 (MQ=60)
CCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCC > SRR4302547.4785072/1‑94 (MQ=60)
CGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCG > SRR4302547.4501505/1‑94 (MQ=60)
GTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCGCCTGTTCAATCGAGCCCGC < SRR4302547.1544983/94‑1 (MQ=60)
TACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCG < SRR4302547.5400478/94‑1 (MQ=60)
ACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGT < SRR4302547.4921056/94‑1 (MQ=60)
CGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTT < SRR4302547.6429132/94‑1 (MQ=60)
CGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTT < SRR4302547.6436896/94‑1 (MQ=60)
GCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTT < SRR4302547.3819226/94‑1 (MQ=60)
GCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTT > SRR4302547.6784920/1‑94 (MQ=60)
GCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTT < SRR4302547.1655979/94‑1 (MQ=60)
CTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAC > SRR4302547.3081621/1‑94 (MQ=60)
CTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAC > SRR4302547.4340815/1‑94 (MQ=60)
TCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACT > SRR4302547.5283862/1‑94 (MQ=60)
TCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACT < SRR4302547.806498/94‑1 (MQ=60)
TCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACT < SRR4302547.4240424/94‑1 (MQ=60)
CAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTC > SRR4302547.190563/1‑94 (MQ=60)
AATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCC < SRR4302547.6185589/94‑1 (MQ=60)
AATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACCCC < SRR4302547.6684415/94‑1 (MQ=60)
ATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCT < SRR4302547.2736495/94‑1 (MQ=60)
TTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTC > SRR4302547.2858407/1‑94 (MQ=60)
TTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCT < SRR4302547.4252821/94‑1 (MQ=60)
TTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCT < SRR4302547.4848386/94‑1 (MQ=60)
TTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCT < SRR4302547.2641995/94‑1 (MQ=60)
TTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCT < SRR4302547.1189271/94‑1 (MQ=60)
TTGACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCT > SRR4302547.3535260/1‑94 (MQ=60)
ACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCTGCGTTTAACTCCTCTGCC > SRR4302547.1057848/1‑94 (MQ=60)
ACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCC > SRR4302547.2976382/1‑94 (MQ=60)
ACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCC < SRR4302547.6699669/94‑1 (MQ=60)
CCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCA > SRR4302547.3214298/1‑94 (MQ=60)
CCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCA < SRR4302547.4392006/94‑1 (MQ=60)
TGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACC > SRR4302547.4745674/1‑94 (MQ=60)
TGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACC > SRR4302547.5248501/1‑94 (MQ=60)
TGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACC > SRR4302547.1886746/1‑94 (MQ=60)
TGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACC < SRR4302547.4315776/94‑1 (MQ=60)
TGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGCTTAACTCCTCTGCCACC > SRR4302547.5357847/1‑94 (MQ=60)
CGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGC < SRR4302547.6524135/94‑1 (MQ=60)
CGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGC > SRR4302547.1307817/1‑94 (MQ=60)
CGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGC < SRR4302547.1439870/94‑1 (MQ=60)
GATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCC > SRR4302547.4295267/1‑94 (MQ=60)
ATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCA < SRR4302547.3219553/94‑1 (MQ=60)
ATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGAGTTTAACTCCTCTGCCACCACAGCCA > SRR4302547.4324089/1‑94 (MQ=60)
TAATGGGCAGCGGCTGCGAGGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAG < SRR4302547.891193/94‑1 (MQ=60)
ATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCAAGTT > SRR4302547.4187777/1‑94 (MQ=60)
ATTGCCAGCGGCTGCGGTGGTAAACGTAATACCCAGGCGTCAACCACCTGTTCAATTGAGCCCGCGCTTAGCTCCTCTGCGACCACAGCCAGTT > SRR4302547.874444/1‑94 (MQ=60)
TTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTC > SRR4302547.6507512/1‑94 (MQ=60)
TTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTC > SRR4302547.2477181/1‑94 (MQ=60)
GGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCAT > SRR4302547.5619656/1‑94 (MQ=60)
CAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCA < SRR4302547.5941009/94‑1 (MQ=60)
CAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCA < SRR4302547.2405195/94‑1 (MQ=60)
AGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCAC < SRR4302547.2003563/94‑1 (MQ=60)
GCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACG < SRR4302547.4098454/94‑1 (MQ=60)
CGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGC > SRR4302547.2527124/1‑94 (MQ=60)
GGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCA > SRR4302547.1165489/1‑94 (MQ=60)
GCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAG < SRR4302547.501116/94‑1 (MQ=60)
CTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGC > SRR4302547.1578114/1‑94 (MQ=60)
TGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCG < SRR4302547.1320233/94‑1 (MQ=60)
TGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCG < SRR4302547.2483854/94‑1 (MQ=60)
GCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGG > SRR4302547.2866285/1‑94 (MQ=60)
GCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGG > SRR4302547.5090686/1‑94 (MQ=60)
CGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGC > SRR4302547.3644845/1‑94 (MQ=60)
GATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTACCTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCT < SRR4302547.121605/94‑1 (MQ=60)
GATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCT < SRR4302547.6196199/94‑1 (MQ=60)
GATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCT > SRR4302547.2776357/1‑94 (MQ=60)
ATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTG > SRR4302547.1423766/1‑94 (MQ=60)
ATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTG > SRR4302547.1778569/1‑94 (MQ=60)
TGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGG < SRR4302547.2211906/94‑1 (MQ=60)
GGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGA > SRR4302547.2313325/1‑94 (MQ=60)
GGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGA > SRR4302547.5776959/1‑94 (MQ=60)
GTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAA < SRR4302547.865418/94‑1 (MQ=60)
AAACGTAATACCCAGGCTTAACCCCCCTGTTCAATCGAGCCCGCTTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAAT < SRR4302547.2776404/94‑1 (MQ=60)
AAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAAT > SRR4302547.1183049/1‑94 (MQ=60)
AACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATA > SRR4302547.4082339/1‑94 (MQ=60)
CGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAAT > SRR4302547.5045276/1‑94 (MQ=60)
CGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAAT < SRR4302547.2655649/94‑1 (MQ=60)
CGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAAT > SRR4302547.2206577/1‑94 (MQ=60)
GTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATC < SRR4302547.5513794/94‑1 (MQ=60)
AATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCAT > SRR4302547.573933/1‑94 (MQ=60)
ATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATC > SRR4302547.4356613/1‑94 (MQ=60)
ATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATC < SRR4302547.4011163/94‑1 (MQ=60)
TACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCA > SRR4302547.185184/1‑94 (MQ=60)
ACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCAT < SRR4302547.1908183/94‑1 (MQ=60)
ACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCAT > SRR4302547.4280779/1‑94 (MQ=60)
CCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATT < SRR4302547.5502943/94‑1 (MQ=60)
CCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATT < SRR4302547.2358873/94‑1 (MQ=60)
CCAGGCGTAAACCTCCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTA < SRR4302547.1187672/94‑1 (MQ=60)
AGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAA > SRR4302547.1993251/1‑94 (MQ=60)
GCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACA < SRR4302547.1729146/94‑1 (MQ=60)
GCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACA > SRR4302547.3879437/1‑94 (MQ=60)
TAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGAC < SRR4302547.2182751/94‑1 (MQ=60)
TAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGAC < SRR4302547.6660164/94‑1 (MQ=60)
TAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGAC < SRR4302547.5365356/94‑1 (MQ=60)
AAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGACG > SRR4302547.2190003/1‑94 (MQ=60)
AAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGACG > SRR4302547.333407/1‑94 (MQ=60)
AAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGACG > SRR4302547.4177018/1‑94 (MQ=60)
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TGTTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTTAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACAGACG > NC_000913/1722826‑1723011
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
