Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,748,385 |
A→G |
D115D (GAT→GAC) |
grpE ← |
GrpE |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,748,385 | 0 | A | G | 98.9%
| 680.0
/ ‑4.7
| 189 | D115D (GAT→GAC) | grpE | GrpE |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (92/95); total (93/96) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 195 total aligned reads displayed.
AGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATATCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCAGCGCGAA > NC_000913/2748295‑2748474
|
aGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTc < 2:633277/93‑1 (MQ=255)
gTTTCGGCGATCACTTCAACGCCAATCTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTcc < 1:5278446/93‑1 (MQ=255)
gTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTcc < 2:2702858/93‑1 (MQ=255)
gTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTcc < 1:3410366/93‑1 (MQ=255)
gTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTcc < 2:5144352/93‑1 (MQ=255)
gTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTcc < 1:2767307/93‑1 (MQ=255)
gTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTcc > 1:5220429/1‑93 (MQ=255)
tttCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCg > 2:4727545/1‑93 (MQ=255)
tttCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCg < 1:2455051/93‑1 (MQ=255)
ttCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCgg < 2:321317/93‑1 (MQ=255)
ggCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGtt < 1:3237438/93‑1 (MQ=255)
ggCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGtt > 1:1593403/1‑93 (MQ=255)
gCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCTGGGTTa > 1:5432126/1‑93 (MQ=255)
gCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTa < 2:5679917/93‑1 (MQ=255)
gATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGc < 2:5502753/93‑1 (MQ=255)
aTCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCt > 1:2524317/1‑93 (MQ=255)
cACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCttt > 2:3843356/1‑93 (MQ=255)
cACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCttt > 1:2685876/1‑93 (MQ=255)
cTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTAt < 2:412958/93‑1 (MQ=255)
cTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTAt < 2:1367166/93‑1 (MQ=255)
cTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTAt > 1:4077884/1‑93 (MQ=255)
ttCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTAta > 2:1475800/1‑92 (MQ=255)
ttCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATc > 1:2635865/1‑93 (MQ=255)
ttCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATc > 2:5440491/1‑93 (MQ=255)
ttCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATc > 2:3170546/1‑93 (MQ=255)
tCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCa < 1:4826998/93‑1 (MQ=255)
tCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCa < 2:2612899/93‑1 (MQ=255)
tCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCa < 1:2155271/93‑1 (MQ=255)
cAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAg < 1:2816224/93‑1 (MQ=255)
cAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAg < 1:4532388/93‑1 (MQ=255)
aCGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGcc > 1:1827274/1‑93 (MQ=255)
gCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCAc > 2:2807559/1‑93 (MQ=255)
ccAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACt < 2:5023516/93‑1 (MQ=255)
cAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACtt > 2:3985971/1‑93 (MQ=255)
aaaCTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTc > 1:2991391/1‑93 (MQ=255)
aaaCTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTc > 1:5666911/1‑93 (MQ=255)
aaaCTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTc < 1:5323339/93‑1 (MQ=255)
aaCTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTcc < 2:357633/93‑1 (MQ=255)
aCTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCa > 2:491966/1‑93 (MQ=255)
cTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAg < 2:2414427/93‑1 (MQ=255)
ttACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCTAgc > 2:4247900/1‑93 (MQ=255)
ttACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAgc < 1:121383/93‑1 (MQ=255)
ttACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAgc < 2:1533468/93‑1 (MQ=255)
tgaCGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAgc < 2:5887324/91‑1 (MQ=255)
tACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAgcg > 2:5631522/1‑93 (MQ=255)
gCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCAc < 1:3861134/93‑1 (MQ=255)
gCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCAc > 2:87673/1‑93 (MQ=255)
cacaACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACg > 1:559018/1‑93 (MQ=255)
aacaTCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATc > 2:6103365/1‑93 (MQ=255)
acaTCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATcc < 1:2117529/93‑1 (MQ=255)
caTCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCa < 1:3584494/93‑1 (MQ=255)
aTCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAg > 2:4542426/1‑93 (MQ=255)
aTCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAg < 2:177594/93‑1 (MQ=255)
ccAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGc < 2:2925181/93‑1 (MQ=255)
aGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTa < 1:5436711/93‑1 (MQ=255)
aTCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTatca > 2:208346/1‑93 (MQ=255)
gACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTatcaatc > 2:5382634/1‑93 (MQ=255)
gACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTatcaatc < 1:6135964/93‑1 (MQ=255)
aCTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTatcaatca < 1:1368617/93‑1 (MQ=255)
cTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCAc < 2:1904623/93‑1 (MQ=255)
cTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCAc > 1:3837163/1‑93 (MQ=255)
ttCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCAcc < 2:3759667/93‑1 (MQ=255)
ttCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCAcc < 2:1110698/93‑1 (MQ=255)
ttCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCAcc < 1:5239706/93‑1 (MQ=255)
ttCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACATCCAGCGCACGATCCAGGCTATCAATCAcc > 1:6010588/1‑93 (MQ=255)
ttCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGACACTTCAAGCGCACGATCAAGGCTATCAATCAcc > 1:2270389/1‑93 (MQ=255)
tCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCg > 2:3752300/1‑93 (MQ=255)
aGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGgc > 2:3494450/1‑93 (MQ=255)
gCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGgca < 1:719035/93‑1 (MQ=255)
tCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGgcagca > 2:4836280/1‑93 (MQ=255)
cAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCaa > 1:4153737/1‑93 (MQ=255)
cgCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAAt < 1:1958464/92‑1 (MQ=255)
aGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAAt < 2:2303995/93‑1 (MQ=255)
aGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAAt > 1:4926585/1‑93 (MQ=255)
gCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAAtt < 1:4224024/93‑1 (MQ=255)
cTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTc > 2:5963762/1‑93 (MQ=255)
cTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTc < 2:3058576/93‑1 (MQ=255)
cTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTc > 1:4510090/1‑93 (MQ=255)
cTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTc < 2:5238950/93‑1 (MQ=255)
tCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCg > 1:130980/1‑93 (MQ=255)
aaggCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGtt < 1:596443/90‑1 (MQ=255)
aaTGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGtt < 1:1015558/93‑1 (MQ=255)
aaTGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGtt < 1:1319860/93‑1 (MQ=255)
aaTGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGtt < 1:5039010/93‑1 (MQ=255)
aTGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTtg > 1:2058554/1‑93 (MQ=255)
gCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTtgat < 1:147063/93‑1 (MQ=255)
ttCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGaa > 1:1171415/1‑93 (MQ=255)
ttCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGaa > 1:2345313/1‑93 (MQ=255)
cAACCATCGCAAACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAAtt < 2:4689847/93‑1 (MQ=255)
aaCCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAAttt > 2:772893/1‑93 (MQ=255)
ctaTCGCAGACATGTCCGGGTTAGCTTTATCATCCACTTACAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGACTTtct > 1:2129155/3‑93 (MQ=255)
cATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTtctc < 2:1612400/93‑1 (MQ=255)
tCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCa > 2:5368119/1‑93 (MQ=255)
tCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCa < 2:1988593/93‑1 (MQ=255)
tCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCa > 2:2202632/1‑93 (MQ=255)
acGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCa < 2:1048587/92‑1 (MQ=255)
gCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCAgc < 2:2509534/93‑1 (MQ=255)
aGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCAgcgc < 2:1259305/93‑1 (MQ=255)
gACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCAGcgcg > 2:5109699/1‑93 (MQ=255)
cATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCAGCGCGaa > 1:915474/1‑93 (MQ=255)
|
AGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATATCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCAGCGCGAA > NC_000913/2748295‑2748474
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATATCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCAGCGCGAATTT > NC_000913/2748292‑2748477
|
GTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATG < SRR4302532.5845550/94‑1 (MQ=60)
TTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGT > SRR4302532.4333695/1‑94 (MQ=60)
AGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCC < SRR4302532.2731645/94‑1 (MQ=60)
AGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCC > SRR4302532.5400464/1‑94 (MQ=60)
GTTTCGGCGATCACTTCAACGCCAATCTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCG < SRR4302532.5460491/94‑1 (MQ=60)
GTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCG < SRR4302532.3524578/94‑1 (MQ=60)
GTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCG < SRR4302532.2860220/94‑1 (MQ=60)
TTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGG < SRR4302532.2536717/94‑1 (MQ=60)
CGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTT > SRR4302532.1647341/1‑94 (MQ=60)
GGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCTGGGTTA > SRR4302532.5620386/1‑94 (MQ=60)
GGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTA < SRR4302532.3344923/94‑1 (MQ=60)
GATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCT < SRR4302532.1358528/94‑1 (MQ=60)
GATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCT < SRR4302532.5787536/94‑1 (MQ=60)
GATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCT > SRR4302532.2608547/1‑94 (MQ=60)
ATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTT > SRR4302532.2582098/1‑94 (MQ=60)
TCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTT > SRR4302532.2776083/1‑94 (MQ=60)
CACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTA < SRR4302532.2921027/94‑1 (MQ=60)
ACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTAT > SRR4302532.4214815/1‑94 (MQ=60)
CTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATC > SRR4302532.2724193/1‑94 (MQ=60)
TTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCA > SRR4302532.1236625/1‑94 (MQ=60)
TCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAG < SRR4302532.4993174/94‑1 (MQ=60)
TCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAG < SRR4302532.2227318/94‑1 (MQ=60)
TCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAG < SRR4302532.153166/94‑1 (MQ=60)
CAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGC < SRR4302532.2910488/94‑1 (MQ=60)
CAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGC < SRR4302532.4687083/94‑1 (MQ=60)
CAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGC < SRR4302532.4687084/94‑1 (MQ=60)
AACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCC > SRR4302532.1888103/1‑94 (MQ=60)
CGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCAC < SRR4302532.3833912/94‑1 (MQ=60)
GCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACT > SRR4302532.4491696/1‑94 (MQ=60)
CCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTT > SRR4302532.6146838/1‑94 (MQ=60)
CAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTC > SRR4302532.5864449/1‑94 (MQ=60)
CAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTC > SRR4302532.3090242/1‑94 (MQ=60)
AAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCC > SRR4302532.5498340/1‑94 (MQ=60)
AAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCC < SRR4302532.5507788/94‑1 (MQ=60)
AACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCA < SRR4302532.5525506/94‑1 (MQ=60)
ACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAG < SRR4302532.6249255/94‑1 (MQ=60)
ACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAG < SRR4302532.494846/94‑1 (MQ=60)
CTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGC > SRR4302532.2710690/1‑94 (MQ=60)
TTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCG < SRR4302532.125520/94‑1 (MQ=60)
CGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCAC > SRR4302532.4271046/1‑94 (MQ=60)
GCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACG > SRR4302532.2483168/1‑94 (MQ=60)
GCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACG < SRR4302532.3991478/94‑1 (MQ=60)
GCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACG > SRR4302532.578512/1‑94 (MQ=60)
CAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATC > SRR4302532.2371377/1‑94 (MQ=60)
AACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCC < SRR4302532.5782406/94‑1 (MQ=60)
ACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCA < SRR4302532.849845/94‑1 (MQ=60)
ACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCA < SRR4302532.2188282/94‑1 (MQ=60)
ACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCA > SRR4302532.5451017/1‑94 (MQ=60)
CATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAG < SRR4302532.3704402/94‑1 (MQ=60)
CCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCT > SRR4302532.1794124/1‑94 (MQ=60)
CCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCT > SRR4302532.4340842/1‑94 (MQ=60)
AGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTAT < SRR4302532.5625131/94‑1 (MQ=60)
GCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATC > SRR4302532.2192239/1‑94 (MQ=60)
ATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAA > SRR4302532.1375439/1‑94 (MQ=60)
GACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCA > SRR4302532.5184446/1‑94 (MQ=60)
GACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCA < SRR4302532.6347642/94‑1 (MQ=60)
CACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCA < SRR4302532.3394172/94‑1 (MQ=60)
ACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCAC < SRR4302532.3325933/94‑1 (MQ=60)
ACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCAC < SRR4302532.1414464/94‑1 (MQ=60)
ACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCAC > SRR4302532.3966711/1‑94 (MQ=60)
CTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACATCCAGCGCACGATCCAGGCTATCAATCACC > SRR4302532.6218148/1‑94 (MQ=60)
CTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGACACTTCAAGCGCACGATCAAGGCTATCAATCACC > SRR4302532.2345736/1‑94 (MQ=60)
TTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCG < SRR4302532.5420354/94‑1 (MQ=60)
CAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTCTCAATCACCGGC > SRR4302532.1425968/1‑94 (MQ=60)
GCGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAG < SRR4302532.743588/94‑1 (MQ=60)
CGTCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGC > SRR4302532.5251861/1‑94 (MQ=60)
TCAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAA > SRR4302532.4293084/1‑94 (MQ=60)
TAGCTCAATGCCTTCAACCATCGCAGACATATCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAAT < SRR4302532.2295362/94‑1 (MQ=60)
CAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAAT > SRR4302532.5401711/1‑94 (MQ=60)
CAGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAAT > SRR4302532.5095776/1‑94 (MQ=60)
CGCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATT < SRR4302532.2023526/94‑1 (MQ=60)
GCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTC < SRR4302532.4365782/94‑1 (MQ=60)
GCTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTC > SRR4302532.4664072/1‑94 (MQ=60)
CTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCG < SRR4302532.730525/94‑1 (MQ=60)
CTCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCG > SRR4302532.135404/1‑94 (MQ=60)
TCAATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGT > SRR4302532.3970072/1‑94 (MQ=60)
AATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTG < SRR4302532.5211856/94‑1 (MQ=60)
AATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTG > SRR4302532.2127117/1‑94 (MQ=60)
AATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTG < SRR4302532.1363979/94‑1 (MQ=60)
AATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTG < SRR4302532.1050041/94‑1 (MQ=60)
AAGGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTG < SRR4302532.617266/94‑1 (MQ=60)
ATGCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGA < SRR4302532.505798/94‑1 (MQ=60)
GCCTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATG < SRR4302532.151992/94‑1 (MQ=60)
CTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAA > SRR4302532.1210563/1‑94 (MQ=60)
CTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAA < SRR4302532.3568049/94‑1 (MQ=60)
CTTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAA > SRR4302532.2423513/1‑94 (MQ=60)
TTCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAAT > SRR4302532.205453/1‑94 (MQ=60)
TCAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATT < SRR4302532.4191067/94‑1 (MQ=60)
CAACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTT < SRR4302532.1344112/94‑1 (MQ=60)
CAACCATCGCAGACATGTCCGGGTCAGCTTTATCAGCCACTTCCAGCGAACGTTCCACGCTATCATTTACCGGCAGCAATTCGTTGATGAATTT > SRR4302532.2160883/1‑94 (MQ=60)
ACTATCGCAGACATGTCCGGGTTAGCTTTATCATCCACTTACAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGACTTTCT > SRR4302532.2200282/1‑94 (MQ=60)
ACCATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCT > SRR4302532.2200283/1‑94 (MQ=60)
CATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCC > SRR4302532.2842951/1‑94 (MQ=60)
CATCGCAGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCC < SRR4302532.1912258/94‑1 (MQ=60)
AGACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCAGCGCG < SRR4302532.6179557/94‑1 (MQ=60)
ACATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCAGCGCGAA > SRR4302532.946796/1‑94 (MQ=60)
CATGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCAGCGCGAAT > SRR4302532.2678171/1‑94 (MQ=60)
TGTCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCAGCGCTAATTT < SRR4302532.2060427/94‑1 (MQ=60)
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GTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATATCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATCACCGGCAGCAATTCGTTGATGAATTTCTCCAGCGCGAATTT > NC_000913/2748292‑2748477
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
