Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,764,178 |
G→A |
L80L (CTG→CTA) |
yfjN → |
putative cell division protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,764,178 | 0 | G | A | 99.0%
| 739.4
/ ‑3.3
| 198 | L80L (CTG→CTA) | yfjN | putative cell division protein |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (96/100); total (97/101) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
Only 100 of 201 total aligned reads displayed.
CAGGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGAC > NC_000913/2764090‑2764267
|
cagGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGcc > 2:3674451/1‑93 (MQ=255)
gggTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAag > 1:5256987/1‑93 (MQ=255)
gggTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAag > 1:1496966/1‑93 (MQ=255)
gggTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAag > 2:3493088/1‑93 (MQ=255)
ggTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAaga < 1:3497731/93‑1 (MQ=255)
gTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAagag < 1:1529056/93‑1 (MQ=255)
ttAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGt > 2:2879724/1‑93 (MQ=255)
ttAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGt < 2:2009394/93‑1 (MQ=255)
ttAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGt > 2:1414087/1‑93 (MQ=255)
tAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGtt < 1:4154761/93‑1 (MQ=255)
aaCTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTa < 2:897245/93‑1 (MQ=255)
aCTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAg < 1:5640158/93‑1 (MQ=255)
aCTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAg < 2:5047972/93‑1 (MQ=255)
cTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGc < 2:2691060/93‑1 (MQ=255)
cTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGc < 1:1624970/93‑1 (MQ=255)
ttGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCg < 1:1856785/93‑1 (MQ=255)
tGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCgg < 1:3143147/93‑1 (MQ=255)
tGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCgg > 2:3754270/1‑93 (MQ=255)
tGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCgg > 1:2915760/1‑93 (MQ=255)
ggCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGa > 2:1986864/1‑93 (MQ=255)
cAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGatc > 2:4454339/1‑93 (MQ=255)
aaCTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGatca > 1:5920730/1‑93 (MQ=255)
aCTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGatcat > 1:4045026/1‑93 (MQ=255)
aCTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGatcat < 1:2259645/93‑1 (MQ=255)
aCTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGatcat > 2:3354991/1‑93 (MQ=255)
cTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGatcatc < 2:5843950/93‑1 (MQ=255)
tgtgGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCt < 1:1040471/93‑1 (MQ=255)
gtgGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCtt > 2:469196/1‑93 (MQ=255)
gtgGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCtt > 1:1170190/1‑93 (MQ=255)
gtgGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCtt < 1:2209355/93‑1 (MQ=255)
tgGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCttt > 1:231889/1‑93 (MQ=255)
ggACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGGCAAGAGTTAGCGGATCATCtttt < 2:1802802/93‑1 (MQ=255)
ggACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCtttt < 2:4842041/93‑1 (MQ=255)
ggACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCtttt > 2:5642905/1‑93 (MQ=255)
cATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGa < 2:1046553/93‑1 (MQ=255)
cATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGa > 2:5248842/1‑93 (MQ=255)
ttttttATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGaaa < 2:1913687/93‑1 (MQ=255)
ttttgATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAAc < 2:588402/93‑1 (MQ=255)
tttATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCa < 1:3842256/93‑1 (MQ=255)
tttATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCa < 1:171407/93‑1 (MQ=255)
ttATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCAt > 2:4093801/1‑93 (MQ=255)
ataACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCa > 2:1473945/1‑93 (MQ=255)
ataACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCa > 2:6042992/1‑93 (MQ=255)
taACGGGGACGGTTCGACTGCAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCaa < 2:2674763/93‑1 (MQ=255)
taACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCaa < 1:3391455/93‑1 (MQ=255)
aaCGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAAt < 1:4873323/93‑1 (MQ=255)
gggACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCctg > 1:908604/1‑93 (MQ=255)
gggACGGTGCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCGATCctg < 1:207803/93‑1 (MQ=255)
gACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCctgct < 1:4669321/93‑1 (MQ=255)
gcGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCctgctg < 1:4470384/92‑1 (MQ=255)
cGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGa > 1:3565343/1‑93 (MQ=255)
ggTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGaa < 2:1160318/93‑1 (MQ=255)
gTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAAt > 2:3852542/1‑93 (MQ=255)
gTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAAt > 2:5967748/1‑93 (MQ=255)
ttCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAAtt < 1:5590857/93‑1 (MQ=255)
tCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAAttt > 2:2387962/1‑93 (MQ=255)
tCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGCTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAAttt > 1:3987985/1‑93 (MQ=255)
cGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTg > 1:4677539/1‑93 (MQ=255)
cGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTg < 2:4234458/93‑1 (MQ=255)
cGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTg < 1:2574026/93‑1 (MQ=255)
gACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGa < 2:3126149/93‑1 (MQ=255)
gACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGa < 1:2426930/93‑1 (MQ=255)
aCTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAg > 1:5021650/1‑93 (MQ=255)
aCTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAg > 1:1898554/1‑93 (MQ=255)
cTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGc > 2:822398/1‑93 (MQ=255)
taaaaTTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCa < 1:619759/90‑1 (MQ=255)
tACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGACACCATCAATCCTGCTGAATTTGAGCa > 1:2768104/1‑93 (MQ=255)
tACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCa > 2:1701591/1‑93 (MQ=255)
cAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAgg < 2:2321990/93‑1 (MQ=255)
cAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAgg > 1:1613964/1‑93 (MQ=255)
aTTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTa > 1:288009/1‑93 (MQ=255)
ttCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTaa > 2:2200192/1‑93 (MQ=255)
tCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTaaa < 2:5789061/93‑1 (MQ=255)
cAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAat > 2:939019/1‑93 (MQ=255)
aaTATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAata > 1:2511609/1‑93 (MQ=255)
tatCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATg < 2:4343121/93‑1 (MQ=255)
tatCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATg < 1:4245502/93‑1 (MQ=255)
atCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATgg > 1:205470/1‑93 (MQ=255)
atCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATgg < 1:4180490/93‑1 (MQ=255)
tctcACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGt < 2:1423324/93‑1 (MQ=255)
tctcACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGt < 2:4605417/93‑1 (MQ=255)
ctcACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTa < 1:5006953/93‑1 (MQ=255)
tcACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTAc < 2:4171771/93‑1 (MQ=255)
tcACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTAc < 2:5143558/93‑1 (MQ=255)
cACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACt < 1:5739845/93‑1 (MQ=255)
aCTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTg > 1:5391680/1‑93 (MQ=255)
aCTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTg > 2:3551337/1‑93 (MQ=255)
cTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGGGGATCATCTTTTTGAAAACATAAATCCTGCTGAATTTGGGCAGGTAAATATGGTACTGc > 1:2099655/1‑93 (MQ=255)
tGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCa > 1:5870705/1‑93 (MQ=255)
tGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCa > 2:625824/1‑93 (MQ=255)
ggAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCaa < 2:5418180/93‑1 (MQ=255)
ggAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCaa < 2:5545137/93‑1 (MQ=255)
ggAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCaa < 1:5319541/93‑1 (MQ=255)
gCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGa < 1:521927/93‑1 (MQ=255)
cattCGTTCTCTAGGCCTAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGAtt > 1:5474277/4‑93 (MQ=255)
cAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGAtt > 1:2544479/1‑93 (MQ=255)
aTCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTg > 1:3728065/1‑93 (MQ=255)
gTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGCAAATATGGTACTGCAAGGAATTGTag > 1:1395170/1‑93 (MQ=255)
ctctAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAgaga < 2:4023020/93‑1 (MQ=255)
tctAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGAc > 2:2689367/1‑93 (MQ=255)
|
CAGGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGAC > NC_000913/2764090‑2764267
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGACCAGGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGACAAG > NC_000913/2764085‑2764270
|
CAGACCAGGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTA < SRR4302532.5524165/94‑1 (MQ=60)
AGACCAGGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAG > SRR4302532.4205998/1‑94 (MQ=60)
GACCAGGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGG < SRR4302532.5070466/94‑1 (MQ=60)
GGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAG > SRR4302532.1547458/1‑94 (MQ=60)
GGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAG > SRR4302532.1547460/1‑94 (MQ=60)
GGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAG > SRR4302532.5762788/1‑94 (MQ=60)
GGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAG < SRR4302532.5302023/94‑1 (MQ=60)
GGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAG > SRR4302532.5438254/1‑94 (MQ=60)
GGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAG < SRR4302532.3614920/94‑1 (MQ=60)
GGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAG < SRR4302532.4834660/94‑1 (MQ=60)
GTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGT < SRR4302532.1580706/94‑1 (MQ=60)
TTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTT < SRR4302532.1624782/94‑1 (MQ=60)
TAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTA < SRR4302532.4294142/94‑1 (MQ=60)
TAACTGGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTA < SRR4302532.4128464/94‑1 (MQ=60)
AACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAG < SRR4302532.1111603/94‑1 (MQ=60)
ACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGC < SRR4302532.5836185/94‑1 (MQ=60)
CTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCG < SRR4302532.1679978/94‑1 (MQ=60)
TTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGG < SRR4302532.1918345/94‑1 (MQ=60)
TTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGG > SRR4302532.1673737/1‑94 (MQ=60)
TTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGG > SRR4302532.3012918/1‑94 (MQ=60)
TGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGA < SRR4302532.3247447/94‑1 (MQ=60)
GCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATC < SRR4302532.5793620/94‑1 (MQ=60)
CAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCT > SRR4302532.6266372/1‑94 (MQ=60)
CAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCA > SRR4302532.6125764/1‑94 (MQ=60)
AACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCAT < SRR4302532.4305459/94‑1 (MQ=60)
AACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCAT > SRR4302532.4181215/1‑94 (MQ=60)
ACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATC < SRR4302532.2334621/94‑1 (MQ=60)
CTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCT > SRR4302532.2325982/1‑94 (MQ=60)
CTGTGGACATTTTTTATAACGGGGACGGATCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCT < SRR4302532.2607322/94‑1 (MQ=60)
TGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTT < SRR4302532.1075559/94‑1 (MQ=60)
TGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTT > SRR4302532.384649/1‑94 (MQ=60)
TGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTT > SRR4302532.1209289/1‑94 (MQ=60)
GTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTT > SRR4302532.239810/1‑94 (MQ=60)
GTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTT < SRR4302532.2282787/94‑1 (MQ=60)
GTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTT < SRR4302532.4071702/94‑1 (MQ=60)
ATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAA > SRR4302532.2208207/1‑94 (MQ=60)
ATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAA > SRR4302532.2589512/1‑94 (MQ=60)
ATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAA > SRR4302532.1761378/1‑94 (MQ=60)
TTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCAT < SRR4302532.177147/94‑1 (MQ=60)
TTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCAT < SRR4302532.3971980/94‑1 (MQ=60)
TAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAAT < SRR4302532.3504906/94‑1 (MQ=60)
AACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATC < SRR4302532.5040857/94‑1 (MQ=60)
CGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCT < SRR4302532.5891787/94‑1 (MQ=60)
CGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCT < SRR4302532.480122/94‑1 (MQ=60)
CGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCT < SRR4302532.2477814/94‑1 (MQ=60)
GGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTG > SRR4302532.939639/1‑94 (MQ=60)
GGGACGGTGCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCGATCCTGC < SRR4302532.214899/94‑1 (MQ=60)
GACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTG < SRR4302532.3482735/94‑1 (MQ=60)
GACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTG < SRR4302532.4828520/94‑1 (MQ=60)
GACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTG < SRR4302532.1937412/94‑1 (MQ=60)
GCGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGA < SRR4302532.4622813/94‑1 (MQ=60)
ACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGA > SRR4302532.3684630/1‑94 (MQ=60)
TTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTT < SRR4302532.5784934/94‑1 (MQ=60)
TTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGCTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTT > SRR4302532.4122318/1‑94 (MQ=60)
TCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTG > SRR4302532.4837013/1‑94 (MQ=60)
CGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGA < SRR4302532.5541303/94‑1 (MQ=60)
CGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGA < SRR4302532.2660003/94‑1 (MQ=60)
GACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAG < SRR4302532.2507585/94‑1 (MQ=60)
GACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAG > SRR4302532.5193883/1‑94 (MQ=60)
GACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAG > SRR4302532.1961506/1‑94 (MQ=60)
GACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAG > SRR4302532.4358028/1‑94 (MQ=60)
GACTACAATTCAATATCTCACTGGAGCCAATCGCTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAG > SRR4302532.5002690/1‑94 (MQ=60)
ACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGC > SRR4302532.2347059/1‑94 (MQ=60)
ACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGC < SRR4302532.2980301/94‑1 (MQ=60)
CTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGACACCATCAATCCTGCTGAATTTGAGCA > SRR4302532.2861044/1‑94 (MQ=60)
CTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCA < SRR4302532.3968288/94‑1 (MQ=60)
CTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCA > SRR4302532.2639750/1‑94 (MQ=60)
TACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAG < SRR4302532.4275442/94‑1 (MQ=60)
TAAAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAG < SRR4302532.641358/94‑1 (MQ=60)
ACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGG > SRR4302532.1668578/1‑94 (MQ=60)
CAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGT < SRR4302532.5592502/94‑1 (MQ=60)
AATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTA < SRR4302532.519198/94‑1 (MQ=60)
AATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTA > SRR4302532.297944/1‑94 (MQ=60)
ATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAA > SRR4302532.2152406/1‑94 (MQ=60)
CAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATA > SRR4302532.6111837/1‑94 (MQ=60)
CAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATA > SRR4302532.2595411/1‑94 (MQ=60)
AATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATAT < SRR4302532.4476916/94‑1 (MQ=60)
ATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATG > SRR4302532.1250398/1‑94 (MQ=60)
TATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGG < SRR4302532.5480772/94‑1 (MQ=60)
TATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGG > SRR4302532.3657195/1‑94 (MQ=60)
TATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGG > SRR4302532.212490/1‑94 (MQ=60)
TATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGG < SRR4302532.4388151/94‑1 (MQ=60)
ATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGT < SRR4302532.4320712/94‑1 (MQ=60)
CTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTAC < SRR4302532.5178558/94‑1 (MQ=60)
CTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTAC < SRR4302532.2975996/94‑1 (MQ=60)
TCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACT < SRR4302532.5416298/94‑1 (MQ=60)
CACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTG > SRR4302532.3159257/1‑94 (MQ=60)
CACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTG < SRR4302532.5939677/94‑1 (MQ=60)
CACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTG > SRR4302532.5578472/1‑94 (MQ=60)
ACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGGGGATCATCTTTTTGAAAACATAAATCCTGCTGAATTTGGGCAGGTAAATATGGTACTGC > SRR4302532.2169701/1‑94 (MQ=60)
CTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCA > SRR4302532.6074145/1‑94 (MQ=60)
TGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAA > SRR4302532.766948/1‑94 (MQ=60)
GGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAG < SRR4302532.5503701/94‑1 (MQ=60)
GCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGAT < SRR4302532.540156/94‑1 (MQ=60)
CCATTCGTTCTCTAGGCCTAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATT > SRR4302532.5664079/1‑94 (MQ=60)
CCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATT > SRR4302532.2629342/1‑94 (MQ=60)
AATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTG > SRR4302532.3853295/1‑94 (MQ=60)
AATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTG < SRR4302532.5984917/94‑1 (MQ=60)
ATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGT < SRR4302532.1525507/94‑1 (MQ=60)
CGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAG < SRR4302532.2098183/94‑1 (MQ=60)
CGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAG < SRR4302532.5154091/94‑1 (MQ=60)
CGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGCAAATATGGTACTGCAAGGAATTGTAG > SRR4302532.1441949/1‑94 (MQ=60)
TTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAG < SRR4302532.2127012/94‑1 (MQ=60)
TTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAG > SRR4302532.2715146/1‑94 (MQ=60)
TTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGCACTGCAAGGATTTGTAGAG < SRR4302532.1772693/94‑1 (MQ=60)
CTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGAC < SRR4302532.3588108/94‑1 (MQ=60)
TAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGACAAG > SRR4302532.5379796/1‑94 (MQ=60)
|
CAGACCAGGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGACAAG > NC_000913/2764085‑2764270
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
