Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,687,487 |
T→C |
Q135R (CAG→CGG) |
yhjM ← |
putative endoglucanase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,687,487 | 0 | T | C | 98.3%
| 813.7
/ 1.2
| 239 | Q135R (CAG→CGG) | yhjM | putative endoglucanase |
| Reads supporting (aligned to +/- strand): ref base T (2/2); new base C (124/111); total (126/113) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.30e-01 |
Only 100 of 261 total aligned reads displayed.
GGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCTGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCAC > NC_000913/3687397‑3687576
|
ggTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAAcgccgc > 1:4047313/1‑93 (MQ=255)
gTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACgccgct > 1:735853/1‑93 (MQ=255)
tAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGctc > 1:2514494/1‑93 (MQ=255)
aacaacATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGctct > 1:5171138/1‑93 (MQ=255)
acaacaTGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCtt < 1:3471545/93‑1 (MQ=255)
acaacaTGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCtt > 1:296412/1‑93 (MQ=255)
caacaTGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCttt > 2:1586472/1‑93 (MQ=255)
caacaTGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCttt < 2:1197063/93‑1 (MQ=255)
acaTGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTcc < 2:2442764/93‑1 (MQ=255)
acaTGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTcc < 2:3160049/93‑1 (MQ=255)
caTGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCca < 1:2393513/93‑1 (MQ=255)
aTGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCcac < 2:3631399/93‑1 (MQ=255)
tGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTcaaga > 2:5147880/1‑89 (MQ=255)
tGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCcaca > 1:481631/1‑93 (MQ=255)
ggAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACaa < 2:3439154/93‑1 (MQ=255)
ggAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACaa > 2:5956636/1‑93 (MQ=255)
gAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACaaa < 2:3834894/93‑1 (MQ=255)
cccagcccagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGc < 1:204001/93‑1 (MQ=255)
cccagcccagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGc < 1:1646260/93‑1 (MQ=255)
cagcccagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGccc > 1:6102910/1‑93 (MQ=255)
cgcccagCCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGcccc < 1:2927544/92‑1 (MQ=255)
agcccagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGcccc < 1:44138/93‑1 (MQ=255)
agcccagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGcccc > 1:3882411/1‑93 (MQ=255)
gcccagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGccccc > 2:59803/1‑92 (MQ=255)
gcccagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCg > 2:4554571/1‑93 (MQ=255)
cagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCt > 2:6068336/1‑93 (MQ=255)
agGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCTGCTCTTTCCACAAACGCCCCGCCTc > 2:2864539/1‑93 (MQ=255)
ggCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTcc > 1:1395609/1‑93 (MQ=255)
ggCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTcc > 2:4037946/1‑93 (MQ=255)
gCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCa > 2:487775/1‑93 (MQ=255)
aCCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGc < 2:5324915/93‑1 (MQ=255)
gTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAAc < 1:3776239/93‑1 (MQ=255)
gTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAAc > 1:1156597/1‑93 (MQ=255)
caccacTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGa < 1:3129619/93‑1 (MQ=255)
cccacTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGAc < 1:4953951/92‑1 (MQ=255)
accacTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGAc > 1:6097315/1‑93 (MQ=255)
ccacTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGAcc > 2:5912278/1‑93 (MQ=255)
ccacTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGAcc > 2:4603464/1‑93 (MQ=255)
cgtctcccccCGCGCGATACGTTTTAGCAACGCCCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCa < 2:687542/89‑1 (MQ=255)
cacTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCa > 2:5743207/1‑93 (MQ=255)
cacTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCa < 2:6148815/93‑1 (MQ=255)
cacTCCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCa < 1:4566720/93‑1 (MQ=255)
acTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAg > 1:434033/1‑93 (MQ=255)
acTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAg > 2:3735060/1‑93 (MQ=255)
acTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACCCCCCGCCTCCAGCAACGACCAg > 2:5111887/1‑93 (MQ=255)
cTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAgg > 2:4411526/1‑93 (MQ=255)
ttCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGc > 1:1694498/1‑93 (MQ=255)
tcctccCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCCGGcc > 2:1219073/1‑93 (MQ=255)
tcctccCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGcc > 2:2591537/1‑93 (MQ=255)
cctccCGCGCGATACGTTTTATCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCa < 2:3995042/93‑1 (MQ=255)
cctccCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCa > 1:3349475/1‑93 (MQ=255)
cctccCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCa < 2:2109561/93‑1 (MQ=255)
ccccGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATc < 1:2140452/92‑1 (MQ=255)
ccccGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATc < 2:1245569/92‑1 (MQ=255)
ccGCGCGATACGTTTTAGCAACGCCCTGCCGATGTAGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCa < 1:4633769/93‑1 (MQ=255)
gcgcgATACGTTTTAGCAACGCGCTGGCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGa < 2:6123822/93‑1 (MQ=255)
gcgcgATACCTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGa < 2:4640088/93‑1 (MQ=255)
cgcgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGAc < 1:5758370/93‑1 (MQ=255)
gcgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACa < 1:2302870/93‑1 (MQ=255)
gcgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACa > 2:2653220/1‑93 (MQ=255)
gcgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACa < 1:1956061/93‑1 (MQ=255)
gcgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACa > 1:2651009/1‑93 (MQ=255)
cgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAGCGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACAt < 1:367490/93‑1 (MQ=255)
cgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCACCCAGACAt > 2:1068113/1‑93 (MQ=255)
gATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATc > 1:1309320/1‑93 (MQ=255)
tACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCAc > 1:5544830/1‑93 (MQ=255)
tACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCAc > 1:708953/1‑93 (MQ=255)
aCGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCAcc > 2:1310509/1‑93 (MQ=255)
cGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCa > 2:1972257/1‑93 (MQ=255)
cGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCa < 2:1926356/93‑1 (MQ=255)
cGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCa < 1:5687869/93‑1 (MQ=255)
cGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCa < 1:587601/93‑1 (MQ=255)
gTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCAt < 1:1773909/93‑1 (MQ=255)
gTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCAt > 1:3423777/1‑93 (MQ=255)
ttttAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATc < 2:2965648/93‑1 (MQ=255)
ttttAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATc > 1:1767120/1‑93 (MQ=255)
ttAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCgg < 1:1380967/93‑1 (MQ=255)
gCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAgg < 1:365901/93‑1 (MQ=255)
gcgcTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGaa < 1:2592858/93‑1 (MQ=255)
cTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGCATTg > 2:3659119/1‑93 (MQ=255)
tGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGc > 2:410552/1‑93 (MQ=255)
tGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGc > 2:4246673/1‑93 (MQ=255)
gCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCt < 2:3256520/93‑1 (MQ=255)
ccGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCACCGGAGGCCGAATTGCTg > 2:5484084/1‑93 (MQ=255)
cGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGt > 2:3099658/1‑93 (MQ=255)
gATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTc > 2:5827460/1‑93 (MQ=255)
aTGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTcc > 1:3271680/1‑93 (MQ=255)
aTGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTcc > 2:5223727/1‑93 (MQ=255)
tGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCa > 1:1498515/1‑93 (MQ=255)
gTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAg < 2:1649309/93‑1 (MQ=255)
tCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGc < 1:5282995/93‑1 (MQ=255)
cGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCa > 1:897828/1‑93 (MQ=255)
cGGTATAACGCCGCTCTTGCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCa < 1:5804547/93‑1 (MQ=255)
ggTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCAc > 2:5275742/1‑93 (MQ=255)
gTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACt > 2:874752/1‑93 (MQ=255)
aaCGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTccc > 1:3445035/1‑93 (MQ=255)
aCGCTGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCa < 1:4168343/93‑1 (MQ=255)
cgccgcTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCAc > 2:3411209/1‑93 (MQ=255)
cgccgcTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCAc < 1:4843481/93‑1 (MQ=255)
cgccgcTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCAc < 1:4773073/93‑1 (MQ=255)
|
GGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCTGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCAC > NC_000913/3687397‑3687576
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCCGGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCTGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTAC > NC_000913/3687394‑3687580
|
CCCGGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCC > SRR4302532.2127211/1‑94 (MQ=60)
CCCGGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGAATAACGCC > SRR4302532.4725172/1‑94 (MQ=60)
CGGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGC > SRR4302532.4183557/1‑94 (MQ=60)
GGTAACAACATGGAACCCAGCCCAGGCCCCGTCCCCACTTCCTCCCGCGCAATGCGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCT < SRR4302532.782629/94‑1 (MQ=60)
GGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCT > SRR4302532.760913/1‑94 (MQ=60)
GGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCT > SRR4302532.1396768/1‑94 (MQ=60)
GTAACAACATGGAGCCCAGCCCAGGCACCGTCACCACTGCCACCCGCGCGATACGTTTAAGCAGCGCGCTGCCGATGTCGGTATAACGCCGCTC < SRR4302532.5474202/94‑1 (MQ=60)
GTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTC < SRR4302532.1807246/94‑1 (MQ=60)
GTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTC > SRR4302532.2598399/1‑94 (MQ=60)
GTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTC > SRR4302532.2598400/1‑94 (MQ=60)
GTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTC > SRR4302532.3432430/1‑94 (MQ=60)
GTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGCTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTC > SRR4302532.2581105/1‑94 (MQ=60)
TAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCT > SRR4302532.5349240/1‑94 (MQ=60)
AACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTT > SRR4302532.306641/1‑94 (MQ=60)
ACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTT < SRR4302532.3587810/94‑1 (MQ=60)
CAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTC < SRR4302532.564284/94‑1 (MQ=60)
CAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTC > SRR4302532.1434435/1‑94 (MQ=60)
ACATGGAACCCATCCCAGGCACCGTCTCCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCA < SRR4302532.3341362/94‑1 (MQ=60)
ACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCA > SRR4302532.304532/1‑94 (MQ=60)
CATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCAC < SRR4302532.2473236/94‑1 (MQ=60)
CATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCAC < SRR4302532.6248507/94‑1 (MQ=60)
ATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACA > SRR4302532.498430/1‑94 (MQ=60)
TGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACTTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAA < SRR4302532.4613613/94‑1 (MQ=60)
GAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAAC < SRR4302532.2275052/94‑1 (MQ=60)
AACCCAGCCCAGGCACCGTCCCCACTCCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACG < SRR4302532.4176791/94‑1 (MQ=60)
AACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACG < SRR4302532.4998396/94‑1 (MQ=60)
CCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCC < SRR4302532.3549864/94‑1 (MQ=60)
CCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCC < SRR4302532.210952/94‑1 (MQ=60)
CCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCC < SRR4302532.1702031/94‑1 (MQ=60)
CCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCC > SRR4302532.5078989/1‑94 (MQ=60)
CCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCC > SRR4302532.3541031/1‑94 (MQ=60)
CCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCC > SRR4302532.6313517/1‑94 (MQ=60)
CAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCC > SRR4302532.4013450/1‑94 (MQ=60)
CGCCCAGCCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCG < SRR4302532.3024935/94‑1 (MQ=60)
AGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCG < SRR4302532.45707/94‑1 (MQ=60)
CCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCT > SRR4302532.3793181/1‑94 (MQ=60)
AGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCC > SRR4302532.1442398/1‑94 (MQ=60)
GGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCA > SRR4302532.3415442/1‑94 (MQ=60)
CGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAAC > SRR4302532.1195216/1‑94 (MQ=60)
GTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACG < SRR4302532.3903406/94‑1 (MQ=60)
cccccCTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGAC < SRR4302532.3096715/89‑1 (MQ=60)
CACCCCTTCCTCCCGCGCGATCCGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGAC < SRR4302532.1347553/94‑1 (MQ=60)
CACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGAC < SRR4302532.3233516/94‑1 (MQ=60)
CACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGAC > SRR4302532.6307772/1‑94 (MQ=60)
CACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGAC < SRR4302532.2390037/94‑1 (MQ=60)
CACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGAC > SRR4302532.1356529/1‑94 (MQ=60)
CCCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACC < SRR4302532.5123904/94‑1 (MQ=60)
ACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATGACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACC > SRR4302532.437772/1‑94 (MQ=60)
CCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCA < SRR4302532.2188357/94‑1 (MQ=60)
CACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAG < SRR4302532.2984649/94‑1 (MQ=60)
CACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAG > SRR4302532.449055/1‑94 (MQ=60)
CACTCCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAG < SRR4302532.4722489/94‑1 (MQ=60)
ACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGG > SRR4302532.4922533/1‑94 (MQ=60)
CTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGC > SRR4302532.2059003/1‑94 (MQ=60)
CTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGC > SRR4302532.1751705/1‑94 (MQ=60)
TTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCC > SRR4302532.2740881/1‑94 (MQ=60)
TCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCA < SRR4302532.870726/94‑1 (MQ=60)
TCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCA > SRR4302532.455699/1‑94 (MQ=60)
TCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCA > SRR4302532.3461306/1‑94 (MQ=60)
TCCCCCCGCGCAATGCGTTTTAGCAACGCCCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCA < SRR4302532.4294580/94‑1 (MQ=60)
CCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCGCAAACGCCCCGCCTCCAGCAACGACCAGGCCATCC < SRR4302532.204835/94‑1 (MQ=60)
CCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCC < SRR4302532.2211931/94‑1 (MQ=60)
CCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCA < SRR4302532.2725644/94‑1 (MQ=60)
CCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTTCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAG > SRR4302532.2606933/1‑94 (MQ=60)
CCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCATGCCATCCAG < SRR4302532.4965209/94‑1 (MQ=60)
CCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAG < SRR4302532.5044831/94‑1 (MQ=60)
CCGCGCGATACGTTTTAGCAACGCCCTGCCGATGTAGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAG < SRR4302532.4791763/94‑1 (MQ=60)
CCGCGCGATACGTTTAAGCAGCGCGCTGCCCATGTCTGTATAGCGCCGCTCTTTCCACAAGCGCCCCGCCTCCAGCAACGACCAGGCCATCCAG < SRR4302532.2499136/94‑1 (MQ=60)
CGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACA > SRR4302532.3223012/1‑94 (MQ=60)
CGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACA > SRR4302532.2739965/1‑94 (MQ=60)
CGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACA < SRR4302532.5958794/94‑1 (MQ=60)
CGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACA > SRR4302532.2664112/1‑94 (MQ=60)
CGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACA > SRR4302532.1900790/1‑94 (MQ=60)
GCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACAT < SRR4302532.2379426/94‑1 (MQ=60)
GCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACAT < SRR4302532.2021036/94‑1 (MQ=60)
CGATGCGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATC < SRR4302532.380258/94‑1 (MQ=60)
CGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAGCGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATC < SRR4302532.380257/94‑1 (MQ=60)
CGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATC > SRR4302532.1796748/1‑94 (MQ=60)
CGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATC > SRR4302532.699286/1‑94 (MQ=60)
CGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATC > SRR4302532.1353141/1‑94 (MQ=60)
GATACGTTTTAGCAACGCGCTGCGGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCA < SRR4302532.3620269/94‑1 (MQ=60)
GATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCA > SRR4302532.1641960/1‑94 (MQ=60)
GATACGTTTCAGCAACGCGCTGCCGATGTCGGAATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCA < SRR4302532.5960525/94‑1 (MQ=60)
ATCCGTTTGAGCAACGCGCTGCTGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCAC < SRR4302532.3149223/94‑1 (MQ=60)
ATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCAC > SRR4302532.733174/1‑94 (MQ=60)
ATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCAC > SRR4302532.5737277/1‑94 (MQ=60)
ATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCAC > SRR4302532.3588123/1‑94 (MQ=60)
ATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCAC > SRR4302532.593582/1‑94 (MQ=60)
ATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCAC < SRR4302532.5374983/94‑1 (MQ=60)
TACGTTTTAGCAACTCGCTGCCGATCTCGGTATAACGCTGCTCTTTCCACAACCGCCCCGCCTCCAGCAACGACCAGACCATCCAGGCATCACC < SRR4302532.4534115/94‑1 (MQ=60)
CGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCCT < SRR4302532.3986156/94‑1 (MQ=60)
CGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCAT > SRR4302532.3538477/1‑94 (MQ=60)
CGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCAT < SRR4302532.5886380/94‑1 (MQ=60)
CGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCAT < SRR4302532.608106/94‑1 (MQ=60)
GTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATC < SRR4302532.5004567/94‑1 (MQ=60)
GTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATC < SRR4302532.1833316/94‑1 (MQ=60)
GTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATC < SRR4302532.5399896/94‑1 (MQ=60)
GTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATC > SRR4302532.2313486/1‑94 (MQ=60)
GTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATC > SRR4302532.1248148/1‑94 (MQ=60)
GTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATC > SRR4302532.1826339/1‑94 (MQ=60)
GTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATC < SRR4302532.1881271/94‑1 (MQ=60)
TTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGA < SRR4302532.1427240/94‑1 (MQ=60)
TAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAG < SRR4302532.4762857/94‑1 (MQ=60)
GCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGC < SRR4302532.378605/94‑1 (MQ=60)
CAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCC < SRR4302532.5692834/94‑1 (MQ=60)
AACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCG > SRR4302532.3940304/1‑94 (MQ=60)
CGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAA > SRR4302532.6309283/1‑94 (MQ=60)
GCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAAT > SRR4302532.6067151/1‑94 (MQ=60)
GCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAAT < SRR4302532.4619811/94‑1 (MQ=60)
GCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAAT < SRR4302532.2679535/94‑1 (MQ=60)
GCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTG > SRR4302532.680178/1‑94 (MQ=60)
CCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGT < SRR4302532.154246/94‑1 (MQ=60)
CGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTC < SRR4302532.739565/94‑1 (MQ=60)
CGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTC < SRR4302532.183115/94‑1 (MQ=60)
CGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTC > SRR4302532.5774929/1‑94 (MQ=60)
GATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCC > SRR4302532.3380475/1‑94 (MQ=60)
ATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCG > SRR4302532.3504383/1‑94 (MQ=60)
ATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCA > SRR4302532.1549064/1‑94 (MQ=60)
ATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCA > SRR4302532.6263165/1‑94 (MQ=60)
ATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCA > SRR4302532.1645051/1‑94 (MQ=60)
TGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAG < SRR4302532.3871573/94‑1 (MQ=60)
TGTCGGTATAACGCCGCTCTTTCAACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAG < SRR4302532.3583550/94‑1 (MQ=60)
TCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCA > SRR4302532.928458/1‑94 (MQ=60)
TCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCA < SRR4302532.5465215/94‑1 (MQ=60)
CGGTATAACGCCGCTCTTGCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCAC < SRR4302532.6006258/94‑1 (MQ=60)
CGGAATAACGCCGCTCTTTCCACAAACGCCTCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCAC > SRR4302532.606269/1‑94 (MQ=60)
GGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACT > SRR4302532.5084739/1‑94 (MQ=60)
GGTATAACGCCGCTCTTTCCACAAACCCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACT < SRR4302532.3517869/94‑1 (MQ=60)
ATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCC > SRR4302532.1748669/1‑94 (MQ=60)
ATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCC < SRR4302532.4204232/94‑1 (MQ=60)
ATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCC > SRR4302532.4900363/1‑94 (MQ=60)
TAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCC < SRR4302532.1527636/94‑1 (MQ=60)
TAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCC > SRR4302532.3560438/1‑94 (MQ=60)
AACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCC > SRR4302532.5329567/1‑94 (MQ=60)
ACGCTGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCAC < SRR4302532.4308139/94‑1 (MQ=60)
ACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCAC > SRR4302532.5894926/1‑94 (MQ=60)
CGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACT < SRR4302532.4937414/94‑1 (MQ=60)
CGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACT < SRR4302532.5010207/94‑1 (MQ=60)
GCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAAaaaaccacacccccccacaacaacaacaacacccgccaagacgctgttctccatctcacc > SRR4302532.3693051/1‑34 (MQ=60)
CCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTA < SRR4302532.4788128/94‑1 (MQ=60)
CCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTA < SRR4302532.491026/94‑1 (MQ=60)
CCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTA > SRR4302532.6046353/1‑94 (MQ=60)
CCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTA > SRR4302532.1065781/1‑94 (MQ=60)
CGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTAC < SRR4302532.6198199/94‑1 (MQ=60)
CGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTAC < SRR4302532.633842/94‑1 (MQ=60)
CGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTAC > SRR4302532.2527510/1‑94 (MQ=60)
CGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTAC > SRR4302532.1827784/1‑94 (MQ=60)
CGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTAC > SRR4302532.5093200/1‑94 (MQ=60)
|
CCCGGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCTGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTAC > NC_000913/3687394‑3687580
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
