Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,687,487 |
T→C |
Q135R (CAG→CGG) |
yhjM ← |
putative endoglucanase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,687,487 | 0 | T | C | 100.0%
| 855.8
/ NA
| 238 | Q135R (CAG→CGG) | yhjM | putative endoglucanase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (134/104); total (134/104) |
Only 100 of 255 total aligned reads displayed.
GGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCTGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCAC > NC_000913/3687397‑3687576
|
ggTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAAcgccgc > 2:1252859/1‑93 (MQ=255)
tAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGctc > 1:1452181/1‑93 (MQ=255)
aacaacATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGctct > 2:3982678/1‑93 (MQ=255)
acaacaTGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCtt < 2:537699/93‑1 (MQ=255)
acaacaTGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCtt < 1:4623368/93‑1 (MQ=255)
aacaTGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTc < 1:4063715/93‑1 (MQ=255)
aacaTGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTc > 2:5174595/1‑93 (MQ=255)
acaTGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTcc > 2:1647597/1‑93 (MQ=255)
caTGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCca > 1:5408560/1‑93 (MQ=255)
ggAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACaa < 1:3982225/93‑1 (MQ=255)
gAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACaaa > 1:3790796/1‑93 (MQ=255)
gAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACaaa < 2:5666092/93‑1 (MQ=255)
aaCCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAAc > 2:4285342/1‑93 (MQ=255)
aaCCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAAc < 2:4521725/93‑1 (MQ=255)
cccagcccagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGc > 1:1065822/1‑93 (MQ=255)
ccagcccagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGcc > 1:524625/1‑93 (MQ=255)
ccagcccagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGcc > 2:1482508/1‑93 (MQ=255)
cagcccagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGccc < 2:5041977/93‑1 (MQ=255)
cgcccagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGcccc < 1:1023071/92‑1 (MQ=255)
gcccagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCg > 2:1745475/1‑93 (MQ=255)
gcccagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCg < 1:612999/93‑1 (MQ=255)
gcccagGCACCGTCACCACTTCCTCCCGCCCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCg > 1:5102841/1‑93 (MQ=255)
cagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCt > 2:5807709/1‑93 (MQ=255)
cagGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCt > 2:3818612/1‑93 (MQ=255)
ggCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTcc > 1:2858427/1‑93 (MQ=255)
ggCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTcc > 2:2903401/1‑93 (MQ=255)
gCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCa > 2:6411272/1‑93 (MQ=255)
cGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCaa > 1:5816349/1‑93 (MQ=255)
cGTCACCACTCCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCaa < 2:2387283/93‑1 (MQ=255)
gTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAAc > 1:1384938/1‑93 (MQ=255)
gTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAAc < 2:2137407/93‑1 (MQ=255)
tCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACg > 2:4780854/1‑93 (MQ=255)
caccacTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGa > 1:5079763/1‑93 (MQ=255)
caccacTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGa > 2:4687499/1‑93 (MQ=255)
acctcTTCCTCCCGCGCGATACGTTTTAGCACCGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGAc < 2:1960507/93‑1 (MQ=255)
ccacTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGAcc > 1:1624290/1‑93 (MQ=255)
cacTCCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCa < 1:3689486/93‑1 (MQ=255)
ccTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAg < 1:4535239/92‑1 (MQ=255)
cTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAgg < 2:3016560/93‑1 (MQ=255)
cctccCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCa < 1:4127065/93‑1 (MQ=255)
cctccCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCa > 1:2316970/1‑93 (MQ=255)
tccCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATc > 1:995031/1‑93 (MQ=255)
cccGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATcc < 1:6458469/93‑1 (MQ=255)
ccGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCa < 2:1923835/93‑1 (MQ=255)
ccGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCa > 2:1331107/1‑93 (MQ=255)
ccGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCa > 1:1333350/1‑93 (MQ=255)
ccGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCa > 2:5326889/1‑93 (MQ=255)
cgcgcgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAg > 2:1608694/1‑93 (MQ=255)
cgcgcgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAg < 1:3287478/93‑1 (MQ=255)
gcgcgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGa < 1:624544/93‑1 (MQ=255)
cgcgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGAc > 2:2635457/1‑93 (MQ=255)
gcgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACa > 1:6409912/1‑93 (MQ=255)
ccgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACa < 2:1996464/92‑1 (MQ=255)
cgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACAt > 2:5998361/1‑93 (MQ=255)
cgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACAt > 2:3855761/1‑93 (MQ=255)
cgATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACAt > 2:1796407/1‑93 (MQ=255)
gATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATc < 2:778043/93‑1 (MQ=255)
gATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATc < 2:6457923/93‑1 (MQ=255)
gATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATc < 2:2727568/93‑1 (MQ=255)
gATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATc > 2:2783339/1‑93 (MQ=255)
gATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATc > 2:2285283/1‑93 (MQ=255)
aTACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCa > 2:3438713/1‑93 (MQ=255)
tACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCAc > 1:4346653/1‑93 (MQ=255)
aCGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCAcc > 2:5843646/1‑93 (MQ=255)
gTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCAt < 1:5656612/93‑1 (MQ=255)
gTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCAt > 2:3237675/1‑93 (MQ=255)
tttAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCg < 2:4198402/93‑1 (MQ=255)
tttAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCg < 2:6348575/93‑1 (MQ=255)
tAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGa < 2:4762301/93‑1 (MQ=255)
tAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGa < 1:3231913/93‑1 (MQ=255)
aGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAg > 1:3221151/1‑93 (MQ=255)
aGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAg < 1:5927562/93‑1 (MQ=255)
aGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCAAGCAACGACCAGGCCATCCAGACATCACCATCGGAg < 1:3382075/93‑1 (MQ=255)
gCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAgg > 2:4721555/1‑93 (MQ=255)
gCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAgg > 2:3574275/1‑93 (MQ=255)
aaCGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGcc > 1:718805/1‑93 (MQ=255)
aCGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCg < 1:2005438/93‑1 (MQ=255)
cgcTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAAt > 1:2106928/1‑93 (MQ=255)
cgcTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAAt > 1:5560145/1‑93 (MQ=255)
cTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTg > 1:2572924/1‑93 (MQ=255)
tGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGc > 2:2828350/1‑93 (MQ=255)
gCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCt < 2:441712/93‑1 (MQ=255)
ccGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTg > 1:4303691/1‑93 (MQ=255)
ccGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTg > 2:6054826/1‑93 (MQ=255)
gaggTCCGTATAACGCCGCTCTTCCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTc < 2:3707153/90‑1 (MQ=255)
gATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTc > 1:2644883/1‑93 (MQ=255)
tGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCa < 1:5119565/93‑1 (MQ=255)
tGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCa > 1:4608194/1‑93 (MQ=255)
gTCGGTATAACGCCGCTCTTTCCCCAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAg < 1:2932374/93‑1 (MQ=255)
gTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAg < 2:3186126/93‑1 (MQ=255)
tCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGc > 2:4602151/1‑93 (MQ=255)
ggTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCAc < 2:1156928/93‑1 (MQ=255)
ggTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCAc > 1:4791481/1‑93 (MQ=255)
ggTATAAAGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCAc > 1:6156656/1‑93 (MQ=255)
gTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACt > 1:6642550/1‑93 (MQ=255)
gTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACt < 2:1541089/93‑1 (MQ=255)
ataACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTc < 1:4593937/93‑1 (MQ=255)
taACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTcc < 2:6119240/93‑1 (MQ=255)
accgccgcTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTccc < 1:4890683/91‑1 (MQ=255)
aCGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCa > 2:3545852/1‑93 (MQ=255)
|
GGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCTGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCAC > NC_000913/3687397‑3687576
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCCGGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCTGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTAC > NC_000913/3687394‑3687580
|
CCCGGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCC > SRR4302547.2899933/1‑94 (MQ=60)
CCCGGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCC > SRR4302547.341262/1‑94 (MQ=60)
CCCGGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCC < SRR4302547.4392796/94‑1 (MQ=60)
CCCGGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCC < SRR4302547.4679617/94‑1 (MQ=60)
CCGGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCG > SRR4302547.2773405/1‑94 (MQ=60)
TGGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGC > SRR4302547.5836080/1‑94 (MQ=60)
CGGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGC > SRR4302547.945704/1‑94 (MQ=60)
GTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTC > SRR4302547.1481218/1‑94 (MQ=60)
GTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTC < SRR4302547.117687/94‑1 (MQ=60)
ACAACATGGAACCCAGCCCAGTCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAAAGCGCTGCCGATGTCGGTATAACGCCGCTCTTT > SRR4302547.6529843/1‑94 (MQ=60)
ACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTT < SRR4302547.4719114/94‑1 (MQ=60)
AACATGGACCCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCC < SRR4302547.6742790/94‑1 (MQ=60)
AACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCC < SRR4302547.4146247/94‑1 (MQ=60)
AACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCC < SRR4302547.4365290/94‑1 (MQ=60)
AACATGGAACCCAGCCCAGGCACCGTCACCACTTCATCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCC < SRR4302547.6462084/94‑1 (MQ=60)
ACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCA > SRR4302547.5520388/1‑94 (MQ=60)
ACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCA < SRR4302547.4589573/94‑1 (MQ=60)
ATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACA > SRR4302547.6281622/1‑94 (MQ=60)
TGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAA > SRR4302547.142732/1‑94 (MQ=60)
GGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAA < SRR4302547.4063202/94‑1 (MQ=60)
GGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAA > SRR4302547.3868089/1‑94 (MQ=60)
ACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGC > SRR4302547.6756060/1‑94 (MQ=60)
ACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGC > SRR4302547.1087041/1‑94 (MQ=60)
CCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCC > SRR4302547.151870/1‑94 (MQ=60)
CCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCC > SRR4302547.534114/1‑94 (MQ=60)
CCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCC > SRR4302547.1829086/1‑94 (MQ=60)
CAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCC > SRR4302547.5291853/1‑94 (MQ=60)
CGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCG < SRR4302547.1043144/94‑1 (MQ=60)
AGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCG < SRR4302547.5884093/94‑1 (MQ=60)
AGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCG > SRR4302547.5038973/1‑94 (MQ=60)
AGCCCAGGCACCGTCACCACTTCCTCCCGCCCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCG > SRR4302547.5208032/1‑94 (MQ=60)
GCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGC < SRR4302547.624363/94‑1 (MQ=60)
CCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCC > SRR4302547.5580126/1‑94 (MQ=60)
CCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCGGCTCTTTCCACAAACGCCCCGCCT < SRR4302547.5640697/94‑1 (MQ=60)
CCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCT > SRR4302547.4699932/1‑94 (MQ=60)
CCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCT < SRR4302547.3248129/94‑1 (MQ=60)
CAGGCACCGACACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGTCGCTGTCGGTATAACGCCGCTCTATCCACAACCGACCCGCCTC > SRR4302547.6629690/1‑94 (MQ=60)
AGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCC > SRR4302547.2915536/1‑94 (MQ=60)
AGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCC > SRR4302547.4706014/1‑94 (MQ=60)
CACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGC > SRR4302547.6351317/1‑94 (MQ=60)
CCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAA > SRR4302547.5936691/1‑94 (MQ=60)
CGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAAC > SRR4302547.1412669/1‑94 (MQ=60)
CGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAAC < SRR4302547.2374989/94‑1 (MQ=60)
GTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACG > SRR4302547.2797237/1‑94 (MQ=60)
CTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACG < SRR4302547.1046083/94‑1 (MQ=60)
TCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGA > SRR4302547.5184572/1‑94 (MQ=60)
ACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACC > SRR4302547.4938515/1‑94 (MQ=60)
ACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACC > SRR4302547.1656426/1‑94 (MQ=60)
CACTCCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAG < SRR4302547.3764803/94‑1 (MQ=60)
CCTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGG < SRR4302547.4628967/94‑1 (MQ=60)
CTGCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGC < SRR4302547.4863086/94‑1 (MQ=60)
TCCCTCCCGCGCGATACTTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCC < SRR4302547.3867524/94‑1 (MQ=60)
CTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCC < SRR4302547.6141909/94‑1 (MQ=60)
TCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGTCCCGCCTCCAGCAACGACCAGGCCA > SRR4302547.5191115/1‑94 (MQ=60)
TCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCA > SRR4302547.5191114/1‑94 (MQ=60)
TCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCA > SRR4302547.2363937/1‑94 (MQ=60)
TCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCA < SRR4302547.1372684/94‑1 (MQ=60)
CCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCAT < SRR4302547.4210996/94‑1 (MQ=60)
CTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATC > SRR4302547.1014417/1‑94 (MQ=60)
CCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCA > SRR4302547.1360152/1‑94 (MQ=60)
CCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCA < SRR4302547.6592976/94‑1 (MQ=60)
CCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCA < SRR4302547.3996574/94‑1 (MQ=60)
CCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGGAACGACCAGGCCATCCAG > SRR4302547.4821335/1‑94 (MQ=60)
CGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGA < SRR4302547.3353434/94‑1 (MQ=60)
GCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGAC < SRR4302547.636081/94‑1 (MQ=60)
CGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACA > SRR4302547.6543590/1‑94 (MQ=60)
CGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACA > SRR4302547.5226518/1‑94 (MQ=60)
CGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACA < SRR4302547.4385117/94‑1 (MQ=60)
GCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACAT > SRR4302547.3275701/1‑94 (MQ=60)
GCGATACGTTTTAGCAACGCGCTGCCGATGTCGCTATAACGCCGCTCTTTCCACAAACGCCCCGCCGCCAGCAACGACCAGGCCATCCAGACAT < SRR4302547.3389708/94‑1 (MQ=60)
GATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCA > SRR4302547.706829/1‑94 (MQ=60)
ATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCAC > SRR4302547.59535/1‑94 (MQ=60)
ATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCAC > SRR4302547.4435994/1‑94 (MQ=60)
TACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACC < SRR4302547.1268880/94‑1 (MQ=60)
TACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACC > SRR4302547.4392977/1‑94 (MQ=60)
ACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCA > SRR4302547.2646382/1‑94 (MQ=60)
ACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCA > SRR4302547.2196254/1‑94 (MQ=60)
GTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATC < SRR4302547.5773383/94‑1 (MQ=60)
TAGCACCGCCCTGCCGAGGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAG < SRR4302547.3576615/94‑1 (MQ=60)
TAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAG > SRR4302547.4495115/1‑94 (MQ=60)
TAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAG > SRR4302547.3285403/1‑94 (MQ=60)
TAGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAG < SRR4302547.3296417/94‑1 (MQ=60)
AGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGG < SRR4302547.4127850/94‑1 (MQ=60)
AGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGG < SRR4302547.6050443/94‑1 (MQ=60)
AGCAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCAAGCAACGACCAGGCCATCCAGACATCACCATCGGAGG < SRR4302547.3450817/94‑1 (MQ=60)
CAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCC > SRR4302547.732156/1‑94 (MQ=60)
CAACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCC > SRR4302547.3917583/1‑94 (MQ=60)
ACCGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCG < SRR4302547.4640275/94‑1 (MQ=60)
AACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCG > SRR4302547.5087635/1‑94 (MQ=60)
ACGCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGA < SRR4302547.2045343/94‑1 (MQ=60)
GCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAAT > SRR4302547.5674828/1‑94 (MQ=60)
GCGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAAT > SRR4302547.2148906/1‑94 (MQ=60)
CGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATT < SRR4302547.5221150/94‑1 (MQ=60)
CGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATT < SRR4302547.3289317/94‑1 (MQ=60)
CGCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATT < SRR4302547.6108114/94‑1 (MQ=60)
GCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTG > SRR4302547.2624866/1‑94 (MQ=60)
CCTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTG < SRR4302547.1418592/94‑1 (MQ=60)
CTGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCTAATTGC > SRR4302547.5769102/1‑94 (MQ=60)
TGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCT > SRR4302547.6275638/1‑94 (MQ=60)
TGCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCT > SRR4302547.3311861/1‑94 (MQ=60)
GCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTG > SRR4302547.4392214/1‑94 (MQ=60)
GCCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTG < SRR4302547.3589310/94‑1 (MQ=60)
GCCGATGTCAGTATAACGCCCCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTT > SRR4302547.6586172/1‑94 (MQ=60)
CCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGT < SRR4302547.2694923/94‑1 (MQ=60)
CCGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGT < SRR4302547.2817946/94‑1 (MQ=60)
CGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTC < SRR4302547.5394166/94‑1 (MQ=60)
CGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTC > SRR4302547.2698102/1‑94 (MQ=60)
CGATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTC > SRR4302547.5567806/1‑94 (MQ=60)
GATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCC > SRR4302547.3415895/1‑94 (MQ=60)
ATGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCA > SRR4302547.4703563/1‑94 (MQ=60)
TGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAG < SRR4302547.2130392/94‑1 (MQ=60)
TGTCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAG < SRR4302547.5225038/94‑1 (MQ=60)
GTCGGTATAACGCCGCTCTTTCCCCAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGC < SRR4302547.2990817/94‑1 (MQ=60)
TCGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCA < SRR4302547.2016202/94‑1 (MQ=60)
CGGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCAC > SRR4302547.4890762/1‑94 (MQ=60)
CGGTATAAAGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCAC > SRR4302547.6284426/1‑94 (MQ=60)
GGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACT > SRR4302547.4078355/1‑94 (MQ=60)
GGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACT < SRR4302547.3334588/94‑1 (MQ=60)
GGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACT > SRR4302547.4700846/1‑94 (MQ=60)
GGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACT > SRR4302547.90655/1‑94 (MQ=60)
GGTATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACT > SRR4302547.6780837/1‑94 (MQ=60)
ATAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCC < SRR4302547.4688996/94‑1 (MQ=60)
TAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCC > SRR4302547.4172473/1‑94 (MQ=60)
TAACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCC < SRR4302547.2941437/94‑1 (MQ=60)
ACCGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCA < SRR4302547.4991973/94‑1 (MQ=60)
ACGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCAC < SRR4302547.2289342/94‑1 (MQ=60)
CGCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACT > SRR4302547.990674/1‑94 (MQ=60)
GCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTT > SRR4302547.1741525/1‑94 (MQ=60)
GCCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTT > SRR4302547.1673724/1‑94 (MQ=60)
CCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGCCCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTT > SRR4302547.5744900/1‑94 (MQ=60)
CCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTA < SRR4302547.3488882/94‑1 (MQ=60)
CCGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTA < SRR4302547.1540520/94‑1 (MQ=60)
CGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTAC > SRR4302547.1834454/1‑94 (MQ=60)
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CCCGGTAACAACATGGAACCCAGCCCAGGCACCGTCACCACTTCCTCCCGCGCGATACGTTTTAGCAACGCGCTGCCGATGTCGGTATAACGCTGCTCTTTCCACAAACGCCCCGCCTCCAGCAACGACCAGGCCATCCAGACATCACCATCGGAGGCCGAATTGCTGTCCAGCACTTCCCACTTAC > NC_000913/3687394‑3687580
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
