Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,948,087 |
G→A |
intergenic (+44/‑96) |
ilvL → / → ilvG |
ilvGEDA operon leader peptide/acetolactate synthase II large subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,948,087 | 0 | G | A | 100.0%
| 693.8
/ NA
| 185 | intergenic (+44/‑96) | ilvL/ilvG | ilvGEDA operon leader peptide/acetolactate synthase II large subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (107/78); total (107/78) |
Only 100 of 198 total aligned reads displayed.
ATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAA > NC_000913/3947996‑3948176
|
ttattaTCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCagg > 2:5783651/1‑93 (MQ=255)
ttattaTCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCagg < 2:4329416/93‑1 (MQ=255)
tattatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCaggg > 1:897594/1‑93 (MQ=255)
attatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCagggg > 1:5293691/1‑93 (MQ=255)
ttatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGt < 1:5527277/93‑1 (MQ=255)
tatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGtt > 2:4913039/1‑93 (MQ=255)
tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGtttt > 2:4594705/1‑93 (MQ=255)
tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGattt > 2:3557869/1‑93 (MQ=255)
ccACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGtttttt > 1:4991825/1‑93 (MQ=255)
cACCGTGCGGGGATGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGttttttt < 1:3227279/93‑1 (MQ=255)
ccGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTg < 1:2697943/93‑1 (MQ=255)
cGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTgc > 1:2417975/1‑92 (MQ=255)
gTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGAc > 2:5529143/1‑93 (MQ=255)
tGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGAcc < 1:4199969/93‑1 (MQ=255)
gCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCt > 2:2503898/1‑93 (MQ=255)
ggggCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTa > 1:192014/1‑93 (MQ=255)
gCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTaaaa > 1:5348012/1‑93 (MQ=255)
cTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTaaaaa < 2:3517808/93‑1 (MQ=255)
tGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTaaaaaa > 1:1386984/1‑92 (MQ=255)
tGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAAc > 2:128492/1‑93 (MQ=255)
tGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAAc < 2:5986816/93‑1 (MQ=255)
tGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAAc < 1:4813610/93‑1 (MQ=255)
gCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACa > 2:1608700/1‑93 (MQ=255)
aCTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATa < 2:5831540/93‑1 (MQ=255)
ttGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACTCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAaaaacaaaac > 2:4565525/1‑93 (MQ=255)
ttGGACGAGAAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAAc < 2:5352399/93‑1 (MQ=255)
tGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAAcc > 1:2020817/1‑93 (MQ=255)
aCGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCgag < 2:4000229/93‑1 (MQ=255)
cGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCgagg < 2:2018824/93‑1 (MQ=255)
gAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCgagga > 2:2739285/1‑93 (MQ=255)
gAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCgagga < 2:403475/93‑1 (MQ=255)
ggAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGc > 2:1895828/1‑93 (MQ=255)
aaaGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAg > 1:3443977/1‑93 (MQ=255)
aaGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGa < 2:6081520/93‑1 (MQ=255)
aGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGAc > 1:2220618/1‑93 (MQ=255)
cTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAATAAAATAACCGAGGAGCAGACaaa > 1:1831518/1‑92 (MQ=255)
cTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAAt > 2:713797/1‑93 (MQ=255)
ttAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATg < 1:1445778/93‑1 (MQ=255)
tAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGa > 1:4289807/1‑93 (MQ=255)
agagATCAAGCCTTAACGACCTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGaa > 1:1798569/1‑93 (MQ=255)
gagaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAAt < 1:988786/93‑1 (MQ=255)
agaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATa > 1:3866670/1‑93 (MQ=255)
agaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATa > 1:4716323/1‑93 (MQ=255)
agaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATa < 2:2158648/93‑1 (MQ=255)
gaTCAAGCATTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATaa > 1:4541392/1‑93 (MQ=255)
aTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAAc < 2:5711807/93‑1 (MQ=255)
aTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAAc < 2:3141843/93‑1 (MQ=255)
tCAAGCCTTAACGAACTTAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACa > 2:1040659/1‑93 (MQ=255)
tCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACa > 2:2275178/1‑93 (MQ=255)
tCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACa > 2:3377253/1‑93 (MQ=255)
tCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACa < 1:4766116/93‑1 (MQ=255)
cAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAg > 1:3462912/1‑93 (MQ=255)
cAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAg < 2:4829059/93‑1 (MQ=255)
aaGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGc < 2:5974388/93‑1 (MQ=255)
aGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGca > 2:1306010/1‑93 (MQ=255)
aGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGca > 1:5796496/1‑93 (MQ=255)
cTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAGCCGAGGAGCAGACAATGAATAACAGCACaa > 1:6010850/1‑93 (MQ=255)
ttAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACaaa > 2:3634300/1‑93 (MQ=255)
tAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACaaaa > 2:1716823/1‑93 (MQ=255)
aaCGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAAt < 2:2401333/93‑1 (MQ=255)
gAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCt > 1:4124226/1‑93 (MQ=255)
aCTAAGACCCCCGCCCCGAAAGGCCCAGGGGTTTTTTTTGACCTTAAAAACAAAACCAAGGGGCAGCCAAGGAATAACAGCACAAAATTCTGt > 1:5876913/1‑93 (MQ=255)
aCTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt < 1:723481/93‑1 (MQ=255)
aCTAAGACCCCCGCACCGAAAGGTCCAGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt > 2:4497228/1‑93 (MQ=255)
cTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGtt > 2:1527175/1‑93 (MQ=255)
cTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGtt > 2:134341/1‑93 (MQ=255)
cTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGtt > 1:1073186/1‑93 (MQ=255)
aaGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc > 2:1560389/1‑93 (MQ=255)
aaGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc < 2:4223716/93‑1 (MQ=255)
aaGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc > 1:3907210/1‑93 (MQ=255)
gACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtctc < 2:5659735/93‑1 (MQ=255)
aCCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCa < 2:5116453/93‑1 (MQ=255)
aCCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCa < 1:5620712/93‑1 (MQ=255)
cccccGCACGGAAAGGTCCAGGAGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCaa < 2:3217831/93‑1 (MQ=255)
ccccGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCCCAAg > 2:4772640/1‑93 (MQ=255)
ccccGCACCGAAAGGTCCAGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAg > 1:1052166/1‑93 (MQ=255)
cccGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGa < 2:2683255/93‑1 (MQ=255)
cccGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGa < 1:1112691/93‑1 (MQ=255)
cccGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAACACAAAATTCTGTTTCTCAAGa > 2:801866/1‑93 (MQ=255)
ccGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGAt > 2:1496247/1‑93 (MQ=255)
ccGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTATTAAGAt > 2:3799622/1‑93 (MQ=255)
gCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCTCAAAATTCTGTTTCTCAAGATTc > 1:3530164/1‑93 (MQ=255)
cacGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAg < 2:5340478/91‑1 (MQ=255)
aCCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAg > 2:2596912/1‑93 (MQ=255)
ccGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg < 2:4185586/93‑1 (MQ=255)
ccGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg > 1:361627/1‑93 (MQ=255)
ccGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg < 1:2177518/93‑1 (MQ=255)
cGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGGGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgta > 1:5078270/1‑91 (MQ=255)
cGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGa < 1:1556897/93‑1 (MQ=255)
cGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGa < 2:3707345/93‑1 (MQ=255)
gAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAc < 2:4133655/93‑1 (MQ=255)
gAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAc < 2:3058632/93‑1 (MQ=255)
aaGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgg < 2:31945/93‑1 (MQ=255)
aaGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgg < 2:5673959/93‑1 (MQ=255)
aGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATACCAGCACAAAATTCTGTTTCTCAAGATTCAGGACggg > 1:5542153/1‑93 (MQ=255)
gTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGa > 2:5185795/1‑93 (MQ=255)
gTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGa < 2:1806862/93‑1 (MQ=255)
tCCAGGGGTTTTTTTTGACCTTAAAACCATAACCGGGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaa < 1:4759975/93‑1 (MQ=255)
tCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACGGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaa > 1:96938/1‑93 (MQ=255)
tCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGGCGGGGaa < 1:2844959/93‑1 (MQ=255)
|
ATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAA > NC_000913/3947996‑3948176
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑GGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAA > NC_000913/3947994‑3948180
|
TGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑A < SRR4302532.4515854/94‑1 (MQ=60)
GATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AG < SRR4302532.5169035/94‑1 (MQ=60)
GATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AG > SRR4302532.5604122/1‑94 (MQ=60)
ATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGG > SRR4302532.5862670/1‑94 (MQ=60)
TTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGG > SRR4302532.928217/1‑94 (MQ=60)
TTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGG > SRR4302532.5325287/1‑94 (MQ=60)
TATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGG > SRR4302532.5476461/1‑94 (MQ=60)
ATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGT > SRR4302532.579772/1‑94 (MQ=60)
TTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTT > SRR4302532.6083269/1‑94 (MQ=60)
TTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTT < SRR4302532.5719081/94‑1 (MQ=60)
TCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTT > SRR4302532.5527107/1‑94 (MQ=60)
CCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGGTTTTT > SRR4302532.5646848/1‑94 (MQ=60)
CCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTT > SRR4302532.4289154/1‑94 (MQ=60)
CCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTT > SRR4302532.5162926/1‑94 (MQ=60)
CACCGTGCGGGGATGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTT < SRR4302532.3334397/94‑1 (MQ=60)
CACCGTGCGGGGATGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTT < SRR4302532.3334396/94‑1 (MQ=60)
ACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTG < SRR4302532.982425/94‑1 (MQ=60)
CCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGC > SRR4302532.2498370/1‑94 (MQ=60)
CCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGA < SRR4302532.2788564/94‑1 (MQ=60)
GTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC < SRR4302532.2577807/94‑1 (MQ=60)
TGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑T < SRR4302532.4340931/94‑1 (MQ=60)
CGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTA > SRR4302532.198482/1‑94 (MQ=60)
GGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAA < SRR4302532.1890439/94‑1 (MQ=60)
GGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAA > SRR4302532.5533553/1‑94 (MQ=60)
CTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACCTTTAAAAA > SRR4302532.1433459/1‑94 (MQ=60)
CTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAAC > SRR4302532.2445905/1‑94 (MQ=60)
CTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAAA > SRR4302532.1433458/1‑94 (MQ=60)
TGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACA < SRR4302532.4979362/94‑1 (MQ=60)
ACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAA > SRR4302532.859937/1‑94 (MQ=60)
TTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACC < SRR4302532.4772018/94‑1 (MQ=60)
TTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACC > SRR4302532.2088184/1‑94 (MQ=60)
ACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGG < SRR4302532.1017408/94‑1 (MQ=60)
GAGGAAAGGCTTAGAGATCAAGCATTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAG > SRR4302532.4893209/1‑94 (MQ=60)
AGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGC > SRR4302532.3844466/1‑94 (MQ=60)
GAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAG > SRR4302532.3559361/1‑94 (MQ=60)
AAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGAC > SRR4302532.2294338/1‑94 (MQ=60)
AGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACA < SRR4302532.4004920/94‑1 (MQ=60)
GCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAATAAAATAACCGAGGAGCAGACAAA > SRR4302532.1892439/1‑94 (MQ=60)
GCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAAT > SRR4302532.1892440/1‑94 (MQ=60)
CTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATG > SRR4302532.1328393/1‑94 (MQ=60)
TTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGA > SRR4302532.4434550/1‑94 (MQ=60)
TTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGA < SRR4302532.1494532/94‑1 (MQ=60)
TTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGA > SRR4302532.4139114/1‑94 (MQ=60)
TTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGCTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGA > SRR4302532.3601465/1‑94 (MQ=60)
TAGAGATCAAGCCTTAACGACCTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAA > SRR4302532.1858625/1‑94 (MQ=60)
TAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAA < SRR4302532.5207934/94‑1 (MQ=60)
GAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATA > SRR4302532.3997162/1‑94 (MQ=60)
GAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATA > SRR4302532.4877241/1‑94 (MQ=60)
GAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATA < SRR4302532.1022563/94‑1 (MQ=60)
AGATCAAGCATTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAA > SRR4302532.4696414/1‑94 (MQ=60)
GATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAAC < SRR4302532.3575591/94‑1 (MQ=60)
TCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAG > SRR4302532.3578897/1‑94 (MQ=60)
TCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAG < SRR4302532.4929523/94‑1 (MQ=60)
TCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAG < SRR4302532.4929522/94‑1 (MQ=60)
AAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCA > SRR4302532.5997968/1‑94 (MQ=60)
GCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACA > SRR4302532.4524208/1‑94 (MQ=60)
CCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAGCCGAGGAGCAGACAATGAATAACAGCACAA > SRR4302532.6218416/1‑94 (MQ=60)
CCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAAAAGCACAA > SRR4302532.356084/1‑94 (MQ=60)
TTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAA > SRR4302532.1533548/1‑94 (MQ=60)
ACGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTC < SRR4302532.2280887/94‑1 (MQ=60)
CGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCT > SRR4302532.4383327/1‑94 (MQ=60)
CGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCT > SRR4302532.4262630/1‑94 (MQ=60)
CGAACTAAGACCCCCGCACCGAAAGGTCC‑AGGCGGTTTTTTTGACC‑TTAAAAACATAACCGAGAAGCAGAGAATGAATAACAGCACAAAATTCT < SRR4302532.60411/94‑1 (MQ=60)
AACTAAGACCCCCGCCCCGAAAGGCCC‑AGGGGTTTTTTTTGACC‑TTAAAAACAAAACCAAGGGGCAGCCAAGGAATAACAGCACAAAATTCTGT > SRR4302532.6080507/1‑94 (MQ=60)
ACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTT < SRR4302532.748156/94‑1 (MQ=60)
ACTAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTT > SRR4302532.1109219/1‑94 (MQ=60)
TAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTC > SRR4302532.4038963/1‑94 (MQ=60)
TAAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTC > SRR4302532.1835348/1‑94 (MQ=60)
AAGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCT > SRR4302532.1125689/1‑94 (MQ=60)
AGACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTC < SRR4302532.2222779/94‑1 (MQ=60)
ACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAA < SRR4302532.5071151/94‑1 (MQ=60)
ACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAA < SRR4302532.5815753/94‑1 (MQ=60)
ACCCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAA > SRR4302532.656807/1‑94 (MQ=60)
CCCCCGCACCGAAAGGTCC‑AGGGGGTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAG > SRR4302532.1087637/1‑94 (MQ=60)
CCCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCTAGGAGCAGACAATGAATAACAGCACAAAATTATGTTTCTCAAGA > SRR4302532.2778979/1‑94 (MQ=60)
CCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGAT < SRR4302532.1149888/94‑1 (MQ=60)
CCCGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGAT > SRR4302532.4978891/1‑94 (MQ=60)
CGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCTCAAAATTCTGTTTCTCAAGATTC > SRR4302532.3648312/1‑94 (MQ=60)
CGCACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTC > SRR4302532.3666082/1‑94 (MQ=60)
ACCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGG > SRR4302532.374151/1‑94 (MQ=60)
CCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGGGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGTA > SRR4302532.5252855/1‑94 (MQ=60)
CCGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGA < SRR4302532.2250234/94‑1 (MQ=60)
CGAAAGGTCC‑AGGGGTTTTTTTTTACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAAAAGCACAAAATTCTTTTTATCAAAATTCAGGAC > SRR4302532.1680629/1‑94 (MQ=60)
CGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAC < SRR4302532.1609537/94‑1 (MQ=60)
CGAAAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAC > SRR4302532.205531/1‑94 (MQ=60)
AAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATACCAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGG > SRR4302532.5734500/1‑94 (MQ=60)
AAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGG > SRR4302532.5734499/1‑94 (MQ=60)
AAGGTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGG > SRR4302532.2841335/1‑94 (MQ=60)
GTCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACGGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAA > SRR4302532.100310/1‑94 (MQ=60)
TCC‑AGGGGTTTTTTTTGACC‑TTAAAACCATAACCGGGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAAC < SRR4302532.4922902/94‑1 (MQ=60)
TCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGGCGGGGAAC < SRR4302532.2940053/94‑1 (MQ=60)
TCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAAC > SRR4302532.1915683/1‑94 (MQ=60)
TCC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAAC > SRR4302532.4480682/1‑94 (MQ=60)
CC‑AGGTGTTTTTTTTGCCC‑AAAAAAACATACCGGAGGAGCAGACAATAAATAACGGCACAAAATTCTGTTCCTCAAGATTCAGGACGGGGAACT < SRR4302532.4603843/94‑1 (MQ=50)
CC‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACT > SRR4302532.2882793/1‑94 (MQ=60)
C‑AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTA > SRR4302532.1630023/1‑94 (MQ=60)
AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAA > SRR4302532.744957/1‑94 (MQ=60)
AGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAA > SRR4302532.1925829/1‑94 (MQ=60)
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TGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑GGGGGTTTTTTTTGACC‑TTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAA > NC_000913/3947994‑3948180
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
