Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,057,759 |
+C |
coding (1773/1776 nt) |
yihK → |
putative GTP‑binding factor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,057,758 | 1 | . | C | 100.0%
| 946.5
/ NA
| 255 | H591P (CAC→CCC) | yihK | putative GTP‑binding factor |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (134/121); total (134/121) |
Only 100 of 281 total aligned reads displayed.
TATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATG > NC_000913/4057666‑4057845
|
tATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCa > 1:1142565/1‑93 (MQ=255)
aTCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑c > 2:4029805/1‑93 (MQ=255)
tCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑cc < 1:2944749/93‑2 (MQ=255)
ccGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑cct < 2:4007112/93‑3 (MQ=255)
ccGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑cct < 1:3349751/93‑3 (MQ=255)
aTGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACg > 2:3701525/1‑93 (MQ=255)
aTGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACg > 1:954183/1‑93 (MQ=255)
tggctctGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACgg < 2:5224127/90‑1 (MQ=255)
aCTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGaa > 2:5727239/1‑93 (MQ=255)
tctGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGaaaa > 1:774247/1‑93 (MQ=255)
tctGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGaaaa < 1:5398227/93‑1 (MQ=255)
tGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACg > 2:2514380/1‑93 (MQ=255)
gAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAt < 1:1932175/93‑1 (MQ=255)
gAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAt < 2:1974233/93‑1 (MQ=255)
gAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAt > 1:1623863/1‑93 (MQ=255)
aaCAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAtc > 1:4616858/1‑93 (MQ=255)
cAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAtcgt < 2:1939713/93‑1 (MQ=255)
aGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAtcgtcg > 1:5725020/1‑93 (MQ=255)
gCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTcgc < 1:2126543/93‑1 (MQ=255)
ctctGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTcgcc > 2:6148624/1‑93 (MQ=255)
ctctGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTcgcc > 1:970083/1‑93 (MQ=255)
tctGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTcgccg > 2:2340837/1‑93 (MQ=255)
tctGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTcgccg > 1:3833426/1‑93 (MQ=255)
tctGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTccccg > 2:1463018/1‑93 (MQ=255)
gAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGcc < 1:3606018/93‑1 (MQ=255)
gTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCaa > 1:2624009/1‑93 (MQ=255)
tCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAAcc < 1:4816317/93‑1 (MQ=255)
tCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAAcc < 2:5994616/93‑1 (MQ=255)
aTCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACcgc < 1:1855244/93‑1 (MQ=255)
tCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACcgcc > 1:1550022/1‑92 (MQ=255)
gatgatGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCa < 2:2943186/93‑1 (MQ=255)
tgatgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCAcc < 2:4540616/93‑1 (MQ=255)
gatgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCg > 2:2054316/1‑93 (MQ=255)
atgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGa > 2:5877233/1‑93 (MQ=255)
tgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGaa < 1:4113894/93‑1 (MQ=255)
gaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGaaa < 2:4732065/93‑1 (MQ=255)
gaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGaaa > 2:5365756/1‑93 (MQ=255)
gaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGaaa < 2:5606711/93‑1 (MQ=255)
aCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAg > 1:3773223/1‑93 (MQ=255)
aCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAg > 1:1727378/1‑93 (MQ=255)
cGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGACAGa > 1:1786964/1‑93 (MQ=255)
cGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGa > 2:1204370/1‑93 (MQ=255)
gAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGAc < 2:4424062/93‑1 (MQ=255)
aaCTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACg > 1:689587/1‑93 (MQ=255)
aCTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGa > 1:390203/1‑93 (MQ=255)
tGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGAtt < 1:1159098/93‑1 (MQ=255)
tGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGAtt > 1:820589/1‑93 (MQ=255)
ggTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTa > 1:4915865/1‑93 (MQ=255)
gTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTaa < 1:646242/93‑1 (MQ=255)
tAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAt > 2:5773297/1‑93 (MQ=255)
tAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAt > 1:5167418/1‑93 (MQ=255)
tAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAt > 2:3443441/1‑93 (MQ=255)
aGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAtt < 2:2926879/93‑1 (MQ=255)
aaGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGGTTAATTTc < 1:5341508/93‑1 (MQ=255)
aGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCg > 2:3569928/1‑93 (MQ=255)
aGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCg > 1:218243/1‑93 (MQ=255)
tGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGtt < 2:1098139/93‑1 (MQ=255)
aCTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGCTTAATTTCGgttt > 1:3006000/1‑93 (MQ=255)
cTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTaa < 2:3209223/83‑1 (MQ=255)
cTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTaa > 1:3209223/1‑83 (MQ=255)
cTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGttttt < 1:5804587/93‑1 (MQ=255)
cTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGttttt < 1:479751/93‑1 (MQ=255)
ccGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTa > 1:6113499/1‑93 (MQ=255)
gACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGt < 2:414994/93‑1 (MQ=255)
aCCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTc > 2:890640/1‑93 (MQ=255)
aCCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTc > 1:351547/1‑93 (MQ=255)
ctctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAt > 2:5646781/1‑93 (MQ=255)
ctctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAt < 1:44070/93‑1 (MQ=255)
tctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATa > 2:3739226/1‑93 (MQ=255)
tctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATa > 2:4217482/1‑93 (MQ=255)
tctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATa < 1:1247420/93‑1 (MQ=255)
tctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATa > 1:5929750/1‑93 (MQ=255)
ctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaa < 2:3167943/93‑1 (MQ=255)
tATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaa > 2:2310962/1‑93 (MQ=255)
tATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaa > 1:2514368/1‑93 (MQ=255)
tATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaa > 2:5334862/1‑93 (MQ=255)
aTCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaaa < 1:316060/93‑1 (MQ=255)
aTCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaaa < 2:2250309/93‑1 (MQ=255)
ccGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaaaaa < 1:2223103/93‑1 (MQ=255)
cGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAc < 2:4614333/93‑1 (MQ=255)
gTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAcc < 1:1897728/93‑1 (MQ=255)
tATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCt < 1:5229120/93‑1 (MQ=255)
tATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCt > 2:1398628/1‑93 (MQ=255)
aTTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTg < 1:1016388/93‑1 (MQ=255)
aTTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTg < 2:4575530/93‑1 (MQ=255)
aTTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTg < 1:2714652/93‑1 (MQ=255)
ttCGTAAACGTCACCTGACGTAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGc > 1:1371061/1‑93 (MQ=255)
ttCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGc > 2:2793590/1‑93 (MQ=255)
tCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGcc < 2:1824471/93‑1 (MQ=255)
tCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGcc > 2:2691194/1‑93 (MQ=255)
cGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCa > 2:514297/1‑93 (MQ=255)
tAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGc < 1:4389279/93‑1 (MQ=255)
tAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGc > 2:4832483/1‑93 (MQ=255)
tAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGc < 1:4064428/93‑1 (MQ=255)
tAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGc > 2:3052306/1‑93 (MQ=255)
aCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAt > 1:418228/1‑93 (MQ=255)
aCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAt < 1:2360848/93‑1 (MQ=255)
cGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATg < 1:236449/93‑1 (MQ=255)
cGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATg < 2:3959641/93‑1 (MQ=255)
cGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATg < 1:549563/93‑1 (MQ=255)
|
TATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATG > NC_000913/4057666‑4057845
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑A‑CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT > NC_000913/4057666‑4057852
|
TATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑A‑C > SRR4302532.2805982/1‑94 (MQ=60)
ATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑A‑CC > SRR4302532.1627718/1‑94 (MQ=60)
ATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑A‑CC > SRR4302532.3992428/1‑94 (MQ=60)
TCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑A‑Cct < SRR4302532.3042469/94‑3 (MQ=60)
TCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑A‑Cct < SRR4302532.3306333/94‑3 (MQ=60)
CCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑A‑Cctg < SRR4302532.3461592/94‑4 (MQ=60)
CCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑A‑Cctg < SRR4302532.2536089/94‑4 (MQ=60)
CGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGA > SRR4302532.2762372/1‑94 (MQ=60)
CGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGGGACTCCGACATCTATCCGCATTCGTAAACGT‑C‑ACCTGA > SRR4302532.3552033/1‑94 (MQ=60)
GCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGAACTCTATCCGTATTCGTCAACGT‑C‑ACCTGAC > SRR4302532.3057637/1‑94 (MQ=60)
CATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACG > SRR4302532.986792/1‑94 (MQ=60)
CATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACG > SRR4302532.3957905/1‑94 (MQ=60)
ATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGAGCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGG > SRR4302532.806078/1‑94 (MQ=60)
ATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGG > SRR4302532.3439793/1‑94 (MQ=60)
ATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGG > SRR4302532.189600/1‑94 (MQ=60)
CTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAA > SRR4302532.3911077/1‑94 (MQ=60)
CTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAA > SRR4302532.267163/1‑94 (MQ=60)
CTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAA > SRR4302532.800928/1‑94 (MQ=60)
CTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAA > SRR4302532.800929/1‑94 (MQ=60)
TCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAAC < SRR4302532.5585276/94‑1 (MQ=60)
TCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAAC > SRR4302532.1186023/1‑94 (MQ=60)
TGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGA > SRR4302532.486070/1‑94 (MQ=60)
GGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGAT > SRR4302532.1678818/1‑94 (MQ=60)
GAACAAGGCCTGGACTTCATCGATTACGGCGAACTGGTAGAAGTGACTCCGTCCTCGATCCGTATTCGTAAACGT‑C‑ACCTGACTGAAAACGATC < SRR4302532.2961719/94‑1 (MQ=38)
GAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATC > SRR4302532.4774280/1‑94 (MQ=60)
GAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATC < SRR4302532.5083223/94‑1 (MQ=60)
GAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATC > SRR4302532.2260806/1‑94 (MQ=60)
GAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATC < SRR4302532.1996476/94‑1 (MQ=60)
gtcaagctctggagctgaacgatcttgacgacggggtacaagtcactccccCCTCTATCCGTATTCGTAAACGT‑CGC‑CTGACGGAAAACGATCG < SRR4302532.5359767/43‑1 (MQ=52)
AACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCG < SRR4302532.991720/94‑1 (MQ=60)
AAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCG > SRR4302532.5924410/1‑94 (MQ=60)
AAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCG < SRR4302532.5016457/94‑1 (MQ=60)
GCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCC > SRR4302532.1003183/1‑94 (MQ=60)
GCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCC < SRR4302532.2197600/94‑1 (MQ=60)
GCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCC < SRR4302532.1478971/94‑1 (MQ=60)
CTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCG > SRR4302532.3962853/1‑94 (MQ=60)
TGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGC > SRR4302532.1818762/1‑94 (MQ=60)
GAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCA < SRR4302532.3726548/94‑1 (MQ=60)
AGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAA > SRR4302532.2711872/1‑94 (MQ=60)
AGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAA > SRR4302532.619923/1‑94 (MQ=60)
GTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAAC < SRR4302532.3044593/94‑1 (MQ=60)
GTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAAC > SRR4302532.695313/1‑94 (MQ=60)
GTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAAC < SRR4302532.5957985/94‑1 (MQ=60)
TTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACC > SRR4302532.1731196/1‑94 (MQ=60)
TCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCG < SRR4302532.4982156/94‑1 (MQ=60)
TCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCG < SRR4302532.6111494/94‑1 (MQ=60)
CATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGC > SRR4302532.1339744/1‑94 (MQ=60)
ATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCG > SRR4302532.1602206/1‑94 (MQ=60)
ATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCG < SRR4302532.748527/94‑1 (MQ=60)
ATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCG < SRR4302532.1916773/94‑1 (MQ=60)
ATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCC > SRR4302532.1602406/1‑94 (MQ=60)
CGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCA < SRR4302532.744022/94‑1 (MQ=60)
ATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCACTGCGCCAACCGCGCCCC > SRR4302532.1943628/1‑94 (MQ=60)
acgagccatgCTGGTAGAAGTGACCCCGCCCTCTAGCCGTATTCTTAAACGT‑C‑ACCTGACGGAAACCGATCGTCGCCGCGCCAACCGCGCACCG < SRR4302532.184559/84‑1 (MQ=60)
GCTGACGAACTGGTTGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCAGCGCCAACCGCGCACCGA > SRR4302532.4433321/1‑94 (MQ=60)
GATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGA < SRR4302532.1066791/94‑1 (MQ=60)
TGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAA < SRR4302532.4251979/94‑1 (MQ=60)
ggctAACTGGTAGAAGTGGCTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAG < SRR4302532.2165517/90‑1 (MQ=60)
GACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAG > SRR4302532.1785536/1‑94 (MQ=60)
GACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAG > SRR4302532.3900265/1‑94 (MQ=60)
GACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAG > SRR4302532.3224233/1‑94 (MQ=60)
GACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAG < SRR4302532.2436349/94‑1 (MQ=60)
ACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGACAGA > SRR4302532.1846694/1‑94 (MQ=60)
GAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACG < SRR4302532.948752/94‑1 (MQ=60)
GAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACG > SRR4302532.6109400/1‑94 (MQ=60)
GAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACG < SRR4302532.268986/94‑1 (MQ=60)
GAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACG > SRR4302532.713257/1‑94 (MQ=60)
AACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGA > SRR4302532.403850/1‑94 (MQ=60)
AACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGA > SRR4302532.1838059/1‑94 (MQ=60)
ACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGAT < SRR4302532.5397393/94‑1 (MQ=60)
ACTGGTAGAAGTGACTCCGACCTATATCCGTATTCGTAAACCTCC‑C‑CTGACGGAAAACGATCGTCGCCGCGCCACCCGCGCACCGAAAGACGAT < SRR4302532.2975407/94‑1 (MQ=60)
CTGGTAGAAGTGACTCCGCCCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATT < SRR4302532.2070326/94‑1 (MQ=60)
CTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATT > SRR4302532.848590/1‑94 (MQ=60)
CTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATT < SRR4302532.5419639/94‑1 (MQ=60)
TGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTA > SRR4302532.5084738/1‑94 (MQ=60)
TGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTA < SRR4302532.3987683/94‑1 (MQ=60)
TGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTA < SRR4302532.4170435/94‑1 (MQ=60)
TGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTA < SRR4302532.1197820/94‑1 (MQ=60)
TGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTA < SRR4302532.4974247/94‑1 (MQ=60)
GGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAA > SRR4302532.5096631/1‑94 (MQ=60)
GGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAA < SRR4302532.1947400/94‑1 (MQ=60)
GTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAT < SRR4302532.5173866/94‑1 (MQ=60)
GTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAT < SRR4302532.668686/94‑1 (MQ=60)
GTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAT > SRR4302532.5345369/1‑94 (MQ=60)
AGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTT < SRR4302532.3043382/94‑1 (MQ=60)
GAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTC < SRR4302532.2715381/94‑1 (MQ=60)
AAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGGTTAATTTCG < SRR4302532.5526822/94‑1 (MQ=60)
AAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCG > SRR4302532.225697/1‑94 (MQ=60)
AGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGT > SRR4302532.4469737/1‑94 (MQ=60)
TGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTT < SRR4302532.593990/94‑1 (MQ=60)
GACTCCGTCCTCTATCCGTATGCGTAAGCATCC‑C‑CTGACGGAAAATGATCGTCACCGCGCCAACCGCGCACCGAAAGACGATTAATTTTGTTTT < SRR4302532.826299/94‑1 (MQ=46)
GACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGCTTAATTTCGGTTT > SRR4302532.3105248/1‑94 (MQ=60)
ACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATatcccgaag > SRR4302532.3315788/1‑85 (MQ=60)
CTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTT < SRR4302532.496477/94‑1 (MQ=60)
CTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTT > SRR4302532.6355315/1‑94 (MQ=60)
CTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTT > SRR4302532.3599227/1‑94 (MQ=60)
CTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTT < SRR4302532.6006299/94‑1 (MQ=60)
TCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTA < SRR4302532.2414335/94‑1 (MQ=60)
TCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTA > SRR4302532.6324496/1‑94 (MQ=60)
CCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAG < SRR4302532.705594/94‑1 (MQ=60)
CCGACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAG < SRR4302532.1912649/94‑1 (MQ=60)
GACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTC < SRR4302532.4284924/94‑1 (MQ=60)
GACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTC > SRR4302532.1697020/1‑94 (MQ=60)
GACCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTC > SRR4302532.363716/1‑94 (MQ=60)
CCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT < SRR4302532.929535/94‑1 (MQ=60)
CCTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT < SRR4302532.5513811/94‑1 (MQ=60)
CTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTTGTTTTTTATTCATA > SRR4302532.4643766/1‑94 (MQ=60)
CTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATA < SRR4302532.45636/94‑1 (MQ=60)
CTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATA > SRR4302532.6135027/1‑94 (MQ=60)
CTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATA > SRR4302532.5550668/1‑94 (MQ=60)
CTCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATA > SRR4302532.2254556/1‑94 (MQ=60)
TCTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAA < SRR4302532.1289150/94‑1 (MQ=60)
CTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAA < SRR4302532.575791/94‑1 (MQ=60)
CTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAA > SRR4302532.2598078/1‑94 (MQ=60)
CTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAA > SRR4302532.4562420/1‑94 (MQ=60)
CTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAA > SRR4302532.2272647/1‑94 (MQ=60)
CTATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAA > SRR4302532.2598270/1‑94 (MQ=60)
ATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGACAGACGATTAATTTCGTTTTTTAGTCATAAAAA > SRR4302532.1263312/1‑94 (MQ=60)
ATCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAA < SRR4302532.327029/94‑1 (MQ=60)
TCCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAA < SRR4302532.2204066/94‑1 (MQ=60)
CCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAC > SRR4302532.5706576/1‑94 (MQ=60)
CCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAC > SRR4302532.4857092/1‑94 (MQ=60)
CCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAC < SRR4302532.421778/94‑1 (MQ=60)
CCGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAC < SRR4302532.2296903/94‑1 (MQ=60)
CGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACC < SRR4302532.5580554/94‑1 (MQ=60)
CGTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACC > SRR4302532.4084898/1‑94 (MQ=60)
GTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCT < SRR4302532.563971/94‑1 (MQ=60)
GTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCT < SRR4302532.1960651/94‑1 (MQ=60)
GTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTGTTAGTCATAAAAAACCT < SRR4302532.1960652/94‑1 (MQ=60)
GTATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTGCGTTTTTTAGTCATAAAAAACCT > SRR4302532.3645616/1‑94 (MQ=60)
TATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTG > SRR4302532.4544034/1‑94 (MQ=60)
TATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTG < SRR4302532.5409458/94‑1 (MQ=60)
TATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTG > SRR4302532.4237704/1‑94 (MQ=60)
ATTCGTAAACGT‑C‑ACCTGACGTAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGC > SRR4302532.1416994/1‑94 (MQ=60)
ATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGC > SRR4302532.2933764/1‑94 (MQ=60)
ATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGC < SRR4302532.1050900/94‑1 (MQ=60)
ATTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGC < SRR4302532.2805957/94‑1 (MQ=60)
TTCGTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCC < SRR4302532.3681533/94‑1 (MQ=60)
GTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTCATTTAGTTTTTTAGTCATAAAAAACCTGCCAGC > SRR4302532.1501739/1‑94 (MQ=60)
GTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGC > SRR4302532.3392874/1‑94 (MQ=60)
GTAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGC > SRR4302532.6296392/1‑94 (MQ=60)
TAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCG < SRR4302532.4200998/94‑1 (MQ=60)
TAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCG < SRR4302532.3792010/94‑1 (MQ=60)
TAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCG < SRR4302532.4538485/94‑1 (MQ=60)
TAAACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCG < SRR4302532.4538486/94‑1 (MQ=60)
AACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAT > SRR4302532.432741/1‑94 (MQ=60)
AACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAT < SRR4302532.1258227/94‑1 (MQ=60)
ACGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATG < SRR4302532.2439602/94‑1 (MQ=60)
CGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGG < SRR4302532.244577/94‑1 (MQ=60)
CGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGG < SRR4302532.568733/94‑1 (MQ=60)
CGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGG < SRR4302532.5394893/94‑1 (MQ=60)
CGT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGG < SRR4302532.244579/94‑1 (MQ=60)
GT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGC > SRR4302532.256285/1‑94 (MQ=60)
GT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGC < SRR4302532.3404996/94‑1 (MQ=60)
GT‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGC > SRR4302532.5732370/1‑94 (MQ=60)
T‑C‑ACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA > SRR4302532.5519318/1‑94 (MQ=60)
C‑CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGT < SRR4302532.4794750/94‑1 (MQ=60)
C‑CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGT > SRR4302532.5804789/1‑94 (MQ=60)
CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCGCCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT > SRR4302532.4108117/1‑94 (MQ=60)
CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT < SRR4302532.3230272/94‑1 (MQ=60)
CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT > SRR4302532.4461639/1‑94 (MQ=60)
CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT < SRR4302532.5812487/94‑1 (MQ=60)
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TATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑A‑CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT > NC_000913/4057666‑4057852
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
