Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,298,691 |
A→G |
V609A (GTC→GCC) |
yjcQ ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,298,691 | 0 | A | G | 98.6%
| 734.4
/ ‑0.8
| 213 | V609A (GTC→GCC) | yjcQ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (2/1); new base G (88/122); total (90/123) |
| Fisher's exact test for biased strand distribution p-value = 5.75e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.64e-01 |
Only 100 of 226 total aligned reads displayed.
ATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCG > NC_000913/4298601‑4298780
|
aTTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCg < 1:2904285/93‑1 (MQ=255)
aTTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCg > 1:2419548/1‑93 (MQ=255)
tGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCgtg > 2:413231/1‑93 (MQ=255)
tGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCgtg < 1:3117540/93‑1 (MQ=255)
gATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCgtgt < 2:6027189/93‑1 (MQ=255)
gATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCgtgt < 2:504777/93‑1 (MQ=255)
gATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCgtgt > 1:3027614/1‑93 (MQ=255)
tCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTg > 2:4292183/1‑93 (MQ=255)
tCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTg < 2:1248589/93‑1 (MQ=255)
tCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTg > 1:2117237/1‑93 (MQ=255)
tCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTg > 2:3328119/1‑93 (MQ=255)
aTTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCt > 1:4402575/1‑93 (MQ=255)
ttGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGGTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTc > 2:197108/1‑93 (MQ=255)
gCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCt < 1:5264736/93‑1 (MQ=255)
gCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCt < 2:4720948/93‑1 (MQ=255)
gCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCt > 2:2489687/1‑93 (MQ=255)
tGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTggt > 1:1665275/1‑91 (MQ=255)
tGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGtt > 2:1500853/1‑93 (MQ=255)
tCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaa > 1:2623550/1‑93 (MQ=255)
tCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaa < 1:1350966/93‑1 (MQ=255)
tCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaa > 1:864082/1‑93 (MQ=255)
ccTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaat > 2:3314952/1‑93 (MQ=255)
ccTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaat < 2:3897864/93‑1 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaataa > 1:4578125/1‑93 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaataa < 2:1558820/93‑1 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaataa > 2:80495/1‑93 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaataa < 1:1471973/93‑1 (MQ=255)
gtgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAgg < 1:254578/93‑1 (MQ=255)
tgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTTATAAGGt > 2:3669999/1‑93 (MQ=255)
tgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAggg > 1:220111/1‑92 (MQ=255)
tgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGt < 2:3974336/93‑1 (MQ=255)
tgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGt < 2:5222671/93‑1 (MQ=255)
tgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGt > 2:2535277/1‑93 (MQ=255)
tgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGt > 2:5207481/1‑93 (MQ=255)
tgCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGt < 1:5361252/93‑1 (MQ=255)
ccTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTgg > 2:5596170/1‑93 (MQ=255)
tGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGc > 2:223895/1‑93 (MQ=255)
tGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGc < 1:5157508/93‑1 (MQ=255)
gTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTTATAAGGGGGGCa > 1:1263748/1‑93 (MQ=255)
gTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCa < 2:3477824/93‑1 (MQ=255)
gTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCa > 2:5781455/1‑93 (MQ=255)
ttCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAg < 2:5550807/93‑1 (MQ=255)
ccGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGa > 1:3417218/1‑93 (MQ=255)
gTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATg > 1:954319/1‑93 (MQ=255)
gTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATg > 1:354335/1‑93 (MQ=255)
tGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGGTCCTGTTTTAATAAGGTGGGCAGGATgg > 1:1575882/1‑93 (MQ=255)
tGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATgg < 1:5820104/93‑1 (MQ=255)
gggcgTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTg > 1:5936260/1‑93 (MQ=255)
ggcgTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTga < 1:4980489/93‑1 (MQ=255)
gcgTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTgag > 1:2048732/1‑93 (MQ=255)
cgTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTgaga < 2:1129133/93‑1 (MQ=255)
cgTGAATGCCGGGTCTGTCAAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCTTGTTTTAATAAGGTGGGCAGGATGGCCTgaga < 1:1438318/93‑1 (MQ=255)
gTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGagag > 1:1097682/1‑93 (MQ=255)
ttAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAgg < 1:622119/93‑1 (MQ=255)
ttAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAgg > 2:68329/1‑93 (MQ=255)
ttAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAgg > 1:5083823/1‑93 (MQ=255)
ttAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAgg < 1:3684594/93‑1 (MQ=255)
ttAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAgg > 2:3456262/1‑93 (MQ=255)
ttAATGCCGGGGCCGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAgg > 2:2556259/1‑93 (MQ=255)
tAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGc < 1:6082194/93‑1 (MQ=255)
tAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGc < 1:4803188/93‑1 (MQ=255)
tAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGc < 1:3180755/93‑1 (MQ=255)
aaTGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCg > 1:698571/1‑93 (MQ=255)
aaTGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCg > 1:5678339/1‑93 (MQ=255)
aaTGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGACTGAGAGGCg > 1:1026378/1‑93 (MQ=255)
aaTGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAAGATGGCCTGAGAGGCg < 2:4388626/93‑1 (MQ=255)
aTGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCgg < 1:3519155/93‑1 (MQ=255)
tGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCggg < 1:4033227/93‑1 (MQ=255)
ggCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGtctc < 1:3127739/93‑1 (MQ=255)
ggCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGtctc < 2:3225887/93‑1 (MQ=255)
cTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCtt < 2:1650749/93‑1 (MQ=255)
tGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTc < 2:5575433/93‑1 (MQ=255)
tGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTc < 1:4651082/93‑1 (MQ=255)
tGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTc > 1:4315139/1‑93 (MQ=255)
aGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCg > 1:3776053/1‑93 (MQ=255)
tGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCAAGCGTTAt > 2:2400860/1‑93 (MQ=255)
ggCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTAtt < 2:49833/93‑1 (MQ=255)
gCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTAttt < 2:144284/93‑1 (MQ=255)
gCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCAAGCGTTAttt > 1:2164117/1‑93 (MQ=255)
aaGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTga < 2:1004890/93‑1 (MQ=255)
gCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTgagg < 1:1016585/93‑1 (MQ=255)
ggCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCAAGCGTTATTTTAGgaga > 1:1966392/1‑93 (MQ=255)
gCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGaa < 2:3268226/93‑1 (MQ=255)
gCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGaa > 1:4199706/1‑93 (MQ=255)
gAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACg < 2:1750644/93‑1 (MQ=255)
aaaaGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACgg > 1:3255347/1‑93 (MQ=255)
aaaaGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCAAGCGTTTTTTTAGGAGAAAgg > 2:4539382/1‑93 (MQ=255)
aaaGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGc < 1:5177846/93‑1 (MQ=255)
aaGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCt < 2:386510/93‑1 (MQ=255)
aaGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGTTCTCTTCAAGCGGTTTTTGAGGAGAACCGcg > 2:2959062/1‑92 (MQ=255)
gCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGa < 1:346732/93‑1 (MQ=255)
gCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGGTATTTTAGGAGAACGGCTgg > 1:2695042/1‑92 (MQ=255)
cTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAg < 1:5573091/93‑1 (MQ=255)
tGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTGTTTGAGGAGAACGGCTGAGt < 1:4466711/93‑1 (MQ=255)
tGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGt < 2:2777304/93‑1 (MQ=255)
tGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGt < 1:3389814/93‑1 (MQ=255)
gCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGc < 1:4224684/93‑1 (MQ=255)
gCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGc < 2:1800646/93‑1 (MQ=255)
cAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCg < 2:3412015/93‑1 (MQ=255)
cAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCTAGCGTTATTTGAGGAGAAAGGCTGGGGGCg > 1:4921138/1‑93 (MQ=255)
|
ATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCG > NC_000913/4298601‑4298780
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTG > NC_000913/4298598‑4298784
|
ACTATTGATCATTGCGTGTCTCCTTGTGCCTGTTCCGGGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGG < SRR4302532.5871800/94‑1 (MQ=60)
ACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGG > SRR4302532.3353291/1‑94 (MQ=60)
ACGACTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGG < SRR4302532.2023494/94‑1 (MQ=60)
GATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCG > SRR4302532.2499984/1‑94 (MQ=60)
ATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGT < SRR4302532.3001178/94‑1 (MQ=60)
TGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGT < SRR4302532.3220968/94‑1 (MQ=60)
TGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGT > SRR4302532.3127516/1‑94 (MQ=60)
GATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGAGCGAAAAGCTGGCGGGCGTGTT > SRR4302532.6120805/1‑94 (MQ=60)
ATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTG > SRR4302532.2187982/1‑94 (MQ=60)
CATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCT > SRR4302532.1017173/1‑94 (MQ=60)
CATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCT < SRR4302532.4099992/94‑1 (MQ=60)
CATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCT > SRR4302532.4552468/1‑94 (MQ=60)
TTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCC < SRR4302532.862955/94‑1 (MQ=60)
TGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGACAAGCTGGCAGGCGTGTTGCTCCT > SRR4302532.3599901/1‑94 (MQ=60)
TGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCT < SRR4302532.6143461/94‑1 (MQ=60)
GCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTG < SRR4302532.5446303/94‑1 (MQ=60)
CGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGT < SRR4302532.4728540/94‑1 (MQ=60)
GTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGGAAGCGGGCGAAAAGCTGGCAGGCGGGGTGCTCCTGGT > SRR4302532.3744474/1‑94 (MQ=60)
GTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTT > SRR4302532.3230045/1‑94 (MQ=60)
GTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTT < SRR4302532.3197843/94‑1 (MQ=60)
GTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGGT > SRR4302532.1721658/1‑94 (MQ=60)
CTGGCTCCTTGTGCCGGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTT < SRR4302532.5781675/94‑1 (MQ=60)
TGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTT < SRR4302532.2258499/94‑1 (MQ=60)
CTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAA > SRR4302532.893720/1‑94 (MQ=60)
CTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAA > SRR4302532.2711395/1‑94 (MQ=60)
TCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAAT < SRR4302532.1396150/94‑1 (MQ=60)
TCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAAT < SRR4302532.1396149/94‑1 (MQ=60)
TCCTTGTGCCTATTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAAT < SRR4302532.5967055/94‑1 (MQ=60)
CCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATA < SRR4302532.4829048/94‑1 (MQ=60)
CTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAA < SRR4302532.5418149/94‑1 (MQ=60)
CTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAA > SRR4302532.4734230/1‑94 (MQ=60)
TTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAG < SRR4302532.1521566/94‑1 (MQ=60)
GTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGT < SRR4302532.263421/94‑1 (MQ=60)
GTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGG > SRR4302532.227618/1‑94 (MQ=60)
TGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTG < SRR4302532.5318811/94‑1 (MQ=60)
TGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTG < SRR4302532.5547115/94‑1 (MQ=60)
GCCTGTTCCGTGGCGGGCGTTAATGCCGGGTCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGG < SRR4302532.4353640/94‑1 (MQ=60)
GCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGG > SRR4302532.3941779/1‑94 (MQ=60)
GCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGG < SRR4302532.4862099/94‑1 (MQ=60)
CCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGG < SRR4302532.1382178/94‑1 (MQ=60)
CTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGC > SRR4302532.1054791/1‑94 (MQ=60)
CTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGC < SRR4302532.2718424/94‑1 (MQ=60)
CTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGC < SRR4302532.5190705/94‑1 (MQ=60)
TGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTTATAAGGGGGGCA > SRR4302532.1306016/1‑94 (MQ=60)
TGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCA < SRR4302532.5334980/94‑1 (MQ=60)
TGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCA < SRR4302532.5334979/94‑1 (MQ=60)
TGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAAGCGTGTTGCTCCTGTTTTAATAAGGTGGGCG > SRR4302532.2694821/1‑94 (MQ=60)
GTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAG > SRR4302532.3059463/1‑94 (MQ=60)
TCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGA > SRR4302532.3531683/1‑94 (MQ=60)
CGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATG > SRR4302532.366598/1‑94 (MQ=60)
CGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATG > SRR4302532.986929/1‑94 (MQ=60)
CGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATG > SRR4302532.366597/1‑94 (MQ=60)
CGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGCGTTGCTCCTGTTTTAATAAGGTGGGCAGGATG > SRR4302532.3829302/1‑94 (MQ=60)
GTGGCGGGCGTTAATGCCGTGGATGTCGAGTCTGGCAAGCGGGCGAGAAGCTGTCAGGCGTGTTACTACTGTTTTAATAAGGTGGGCAGGATGG < SRR4302532.523813/94‑1 (MQ=60)
GTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGGTCCTGTTTTAATAAGGTGGGCAGGATGG > SRR4302532.1629238/1‑94 (MQ=60)
GTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTTATAAGGTGGGCAGGATGG > SRR4302532.94835/1‑94 (MQ=60)
GTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGG > SRR4302532.1629239/1‑94 (MQ=60)
TGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGC < SRR4302532.6022240/94‑1 (MQ=60)
TGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGC < SRR4302532.6022239/94‑1 (MQ=60)
GGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCC < SRR4302532.2067661/94‑1 (MQ=60)
GCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCT > SRR4302532.1634933/1‑94 (MQ=60)
CGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTG > SRR4302532.6141696/1‑94 (MQ=60)
GGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAG < SRR4302532.3132999/94‑1 (MQ=60)
GGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAG > SRR4302532.2116955/1‑94 (MQ=60)
GGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAG < SRR4302532.5074716/94‑1 (MQ=60)
GGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAG < SRR4302532.5151221/94‑1 (MQ=60)
CGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAG < SRR4302532.360673/94‑1 (MQ=60)
CGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAG < SRR4302532.4338752/94‑1 (MQ=60)
CGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAG > SRR4302532.5546888/1‑94 (MQ=60)
CGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAG > SRR4302532.1134389/1‑94 (MQ=60)
CGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAG < SRR4302532.152576/94‑1 (MQ=60)
CGTGAATGCCGGGTCTGTCAAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCTTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAG < SRR4302532.1486776/94‑1 (MQ=60)
GTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGG > SRR4302532.5258624/1‑94 (MQ=60)
TTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGC < SRR4302532.643828/94‑1 (MQ=60)
TTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGC < SRR4302532.3808332/94‑1 (MQ=60)
TAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCG < SRR4302532.3286389/94‑1 (MQ=60)
TAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCG > SRR4302532.5876591/1‑94 (MQ=60)
TAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCG > SRR4302532.722480/1‑94 (MQ=60)
TAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCG < SRR4302532.4968612/94‑1 (MQ=60)
TAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCG > SRR4302532.3543505/1‑94 (MQ=60)
TAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCG < SRR4302532.6292219/94‑1 (MQ=60)
TAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGACTGAGAGGCG > SRR4302532.1061103/1‑94 (MQ=60)
AATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGG < SRR4302532.5259534/94‑1 (MQ=60)
ATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGG < SRR4302532.3636972/94‑1 (MQ=60)
ATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGG > SRR4302532.5095519/1‑94 (MQ=60)
TGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGT < SRR4302532.4169112/94‑1 (MQ=60)
TGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGT < SRR4302532.557461/94‑1 (MQ=60)
CGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTC < SRR4302532.1304016/94‑1 (MQ=60)
GGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGgggtttt > SRR4302532.5653434/1‑87 (MQ=60)
GGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCT < SRR4302532.3231570/94‑1 (MQ=60)
GGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCT < SRR4302532.717194/94‑1 (MQ=60)
CTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTC > SRR4302532.4461027/1‑94 (MQ=60)
TGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCA < SRR4302532.4809660/94‑1 (MQ=60)
GTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCCA > SRR4302532.4426087/1‑94 (MQ=60)
CCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAAC > SRR4302532.2195980/1‑94 (MQ=60)
CAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCG > SRR4302532.3903216/1‑94 (MQ=60)
CAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCG < SRR4302532.1504985/94‑1 (MQ=60)
GTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTT < SRR4302532.5633898/94‑1 (MQ=60)
GTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTT < SRR4302532.2662761/94‑1 (MQ=60)
TGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATT < SRR4302532.635743/94‑1 (MQ=60)
GGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCAAGCGTTATTT > SRR4302532.2236503/1‑94 (MQ=60)
AAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAG < SRR4302532.828959/94‑1 (MQ=60)
AGCGGGCGAAAAGCTGGCAGGCGTGGTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGgttctttcatcgttattttttg > SRR4302532.1241222/1‑72 (MQ=60)
GCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGA < SRR4302532.1051102/94‑1 (MQ=60)
GCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGA < SRR4302532.4793085/94‑1 (MQ=60)
GGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGGCTCTTCAAGCGTTATTTGAGGAGA > SRR4302532.3330821/1‑94 (MQ=60)
GGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCAAGCGTTATTTTAGGAGA > SRR4302532.2031711/1‑94 (MQ=60)
GGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAA > SRR4302532.4340659/1‑94 (MQ=60)
GCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGTTGTCTCTTCAAGCGTTATTTGAGGAGAAC < SRR4302532.2412883/94‑1 (MQ=60)
GCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAAC < SRR4302532.1117427/94‑1 (MQ=60)
GCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAAC < SRR4302532.3247988/94‑1 (MQ=60)
GCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAAC < SRR4302532.4545894/94‑1 (MQ=60)
GCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAAC < SRR4302532.4578467/94‑1 (MQ=60)
GCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAAC < SRR4302532.4545895/94‑1 (MQ=60)
CGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCCAGCGTTATTTTAGGAGAACG > SRR4302532.2885914/1‑94 (MQ=60)
GAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGgggctctttcaacgtttttttaggaggaacg > SRR4302532.2666576/1‑63 (MQ=60)
GAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGG > SRR4302532.3363481/1‑94 (MQ=60)
GAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGG > SRR4302532.3418036/1‑94 (MQ=60)
GAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCAAGCGTTtttttgggagaaagg > SRR4302532.1778052/1‑79 (MQ=60)
GAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCAAGCGTTATTTGAGGAGAACGG > SRR4302532.3473079/1‑94 (MQ=60)
AAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCT < SRR4302532.5356162/94‑1 (MQ=60)
AGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTTAGGAGGACGGCTGG > SRR4302532.1429668/1‑94 (MQ=60)
AGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGGTATTTTAGGAGAACGGCTGG > SRR4302532.2785564/1‑94 (MQ=60)
GCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAG < SRR4302532.3511945/94‑1 (MQ=60)
GCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAG < SRR4302532.358730/94‑1 (MQ=60)
GCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAG > SRR4302532.2225226/1‑94 (MQ=60)
GCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCCAGCGCTATTTGAGGAGgaacgctgag > SRR4302532.2519769/1‑84 (MQ=60)
CTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGggtgtcttttaacagtatttttggaggaacggtgagg > SRR4302532.5744625/1‑57 (MQ=60)
CTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGT < SRR4302532.5766608/94‑1 (MQ=60)
TGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTGTTTGAGGAGAACGGCTGAGTG < SRR4302532.4618993/94‑1 (MQ=60)
TGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTG < SRR4302532.3503196/94‑1 (MQ=60)
GCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCG < SRR4302532.4366476/94‑1 (MQ=60)
GCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCG < SRR4302532.2150163/94‑1 (MQ=60)
GCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCTAGCGTTATTTGAGGAGAAAGGCTGGGGGCG > SRR4302532.5090177/1‑94 (MQ=60)
CAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGGCTGAGAGGCGGGgggcttttttagcggttttttgttgggagggggtggtgcgg > SRR4302532.928444/1‑53 (MQ=60)
AGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGGTATTTGAGGAGAACGGCTGAGTGGGGT > SRR4302532.702237/1‑94 (MQ=60)
GGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTT < SRR4302532.4164531/94‑1 (MQ=60)
GGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTT < SRR4302532.3932142/94‑1 (MQ=60)
GGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGCTATTTTAGGAGGACCGCCGAGTGCGGGT > SRR4302532.3675275/1‑94 (MQ=60)
GCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGCGAACGGCTGAGGGGGGTTG > SRR4302532.1340751/1‑94 (MQ=60)
|
ACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTG > NC_000913/4298598‑4298784
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
