Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,298,691 |
A→G |
V609A (GTC→GCC) |
yjcQ ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,298,691 | 0 | A | G | 99.6%
| 898.8
/ NA
| 248 | V609A (GTC→GCC) | yjcQ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (123/124); minor base T (0/1); total (123/125) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 264 total aligned reads displayed.
ATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCG > NC_000913/4298601‑4298780
|
ttGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCgt < 2:1558986/93‑1 (MQ=255)
ttGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCgt < 2:4258144/93‑1 (MQ=255)
gATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGTAAAGCCGGCAGGCgtgt > 2:1791176/1‑93 (MQ=255)
gATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCgtgt < 2:249608/93‑1 (MQ=255)
aTCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGtt < 1:5063989/93‑1 (MQ=255)
tCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTg > 2:3232684/1‑93 (MQ=255)
tCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTg > 1:1987910/1‑93 (MQ=255)
cATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGc > 2:6634944/1‑93 (MQ=255)
aTTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGtgctgcc > 2:1892394/1‑92 (MQ=255)
aTTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCt > 1:1905851/1‑93 (MQ=255)
ttGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTc > 1:3197229/1‑93 (MQ=255)
tGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTcc > 2:5042189/1‑93 (MQ=255)
gCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATTCCGGGGCTGTCCAGTCTAGCAAGCGGGCGAAAAGCTGGCCGGCGTGGTGCTCCt > 2:5667341/1‑93 (MQ=255)
cGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATTCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTg > 2:5733651/1‑93 (MQ=255)
cGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTg < 2:5915410/93‑1 (MQ=255)
gTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGt < 2:937601/93‑1 (MQ=255)
tGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGtt < 2:3358751/93‑1 (MQ=255)
tGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGtt > 2:5475888/1‑93 (MQ=255)
tCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaa > 1:1668829/1‑93 (MQ=255)
ccTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtact > 1:3780413/1‑91 (MQ=255)
cTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaata > 2:3947964/1‑93 (MQ=255)
cTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaata < 1:4427656/93‑1 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTttataa > 1:6231865/1‑93 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaataa < 2:2123047/93‑1 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaataa < 2:1988761/93‑1 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaataa > 1:5335509/1‑93 (MQ=255)
ttGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTtaataa < 2:6275188/93‑1 (MQ=255)
gCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCCGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTg > 2:136765/1‑93 (MQ=255)
gCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTg < 2:3377816/93‑1 (MQ=255)
cTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTggg < 1:3500130/93‑1 (MQ=255)
tGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGc > 1:4865880/1‑93 (MQ=255)
ttCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAg < 1:3938057/93‑1 (MQ=255)
tCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAgg > 1:831591/1‑93 (MQ=255)
ccGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGa < 1:2153384/93‑1 (MQ=255)
gTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATg > 2:4488549/1‑93 (MQ=255)
ggcgggcgTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGc < 2:2922889/93‑1 (MQ=255)
ggcgTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGGTGGCCTgg > 2:1655140/1‑92 (MQ=255)
ggcgTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTga > 1:766452/1‑93 (MQ=255)
gcgTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTgag < 2:5291963/93‑1 (MQ=255)
gcgTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTgag > 1:5991185/1‑93 (MQ=255)
gcgTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTgag > 1:1290902/1‑93 (MQ=255)
gcgTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGAGGGCCTgag < 1:6480744/93‑1 (MQ=255)
cgTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTgaga < 2:259303/93‑1 (MQ=255)
cgTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTgaga < 1:3409978/93‑1 (MQ=255)
gTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGagag > 1:4068024/1‑93 (MQ=255)
gTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGagag < 2:145620/93‑1 (MQ=255)
gTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGagag > 1:3138957/1‑93 (MQ=255)
ttAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAgg > 1:4369510/1‑93 (MQ=255)
tAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGc < 2:806917/93‑1 (MQ=255)
aaTGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCg < 2:4077912/93‑1 (MQ=255)
aaTGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCg < 2:5586848/93‑1 (MQ=255)
aTGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCgg > 1:3330808/1‑93 (MQ=255)
tGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCggg < 2:2360784/93‑1 (MQ=255)
gCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGCGGCGGgt < 1:6315169/93‑1 (MQ=255)
gCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCgggg > 1:1375795/1‑92 (MQ=255)
gcgtggCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGgtg < 1:4765376/89‑1 (MQ=255)
gggCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGtct > 2:3911195/1‑93 (MQ=255)
ggCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGtctc < 1:5042189/93‑1 (MQ=255)
ggCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGtctt > 1:157639/1‑92 (MQ=255)
gCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTctct < 1:4588383/93‑1 (MQ=255)
gCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGctct > 1:543054/1‑93 (MQ=255)
cTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCtt < 2:580167/93‑1 (MQ=255)
cTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCtt < 2:728099/93‑1 (MQ=255)
tCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCaa > 2:4429492/1‑93 (MQ=255)
tCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCaa > 2:5020705/1‑93 (MQ=255)
ccAGTCTGGCAAGCGGGCGAAAAGCTGGCAGTCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAg < 2:5599902/93‑1 (MQ=255)
cAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGAGTTTCTTTAAGc > 2:2829154/1‑93 (MQ=255)
gTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGTAGGATGGCCTGAGAGGCGGGGGGTTCTTCAAGCGt > 2:5359837/1‑93 (MQ=255)
tCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCAAGCggt > 2:4289461/1‑91 (MQ=255)
cTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTa > 1:2016395/1‑93 (MQ=255)
tGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTAt < 1:2979033/93‑1 (MQ=255)
ggCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTGTCTTCAAGCGTtttt > 2:3604564/1‑93 (MQ=255)
gCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCAAGCGTTAttt > 1:684369/1‑93 (MQ=255)
cAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGAGGTGTTTg > 2:2959029/1‑93 (MQ=255)
aaGCGGGCGAAAAGCTGGCCGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTAtttta > 1:6468681/1‑91 (MQ=255)
aaGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTga > 2:3847066/1‑93 (MQ=255)
aaGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTga < 2:6022362/93‑1 (MQ=255)
aaGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGGCTCTTCAAGCGTTAtttta > 2:4752764/1‑91 (MQ=255)
aaGCGGGCGAAAAGCTGGCAGGCGTGTGGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCAAGCGCTATTTgg > 2:6500325/1‑92 (MQ=255)
aGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTgag < 1:2465096/93‑1 (MQ=255)
aGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGGCTCTTCAAGCGTTATTTgag > 2:1134344/1‑93 (MQ=255)
gCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCAAGCGTTATTTtagg > 2:3617732/1‑93 (MQ=255)
gCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCCGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCCAGCGTCATTTtagg > 1:5851103/1‑93 (MQ=255)
gggCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTtaggag > 1:4274608/1‑93 (MQ=255)
ggCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGTCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGgaga < 1:281358/93‑1 (MQ=255)
ggCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCAAGCGGTATTTTAGgaga > 1:1499866/1‑93 (MQ=255)
cGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAAc < 1:1000611/93‑1 (MQ=255)
gAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACg < 1:2432632/93‑1 (MQ=255)
aaaaGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCCAGCGTTATTTGAGGAGAACgg > 1:5887667/1‑93 (MQ=255)
aaaaGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCCAGCGTTATTTGAGGAGAACgg > 1:1943831/1‑93 (MQ=255)
aaaGCTGGCAGGCGTGTTGCTCCTGTTTTCATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGGTATTTTAGGAGAACGGc > 2:3055879/1‑93 (MQ=255)
aaGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCt < 1:611486/93‑1 (MQ=255)
aaGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTTTTCAAGCGTTATTTGAGGAGGACGGCt > 1:4896050/1‑93 (MQ=255)
aaGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCAAGCGTTATTTTAGGAGAACGGCt > 2:5192618/1‑93 (MQ=255)
aaGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGTTCTTCAAGCGGTATTTTAGGAGAACgggt > 2:3500553/1‑91 (MQ=255)
cTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAg < 1:1059988/93‑1 (MQ=255)
tGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGt < 1:5635484/93‑1 (MQ=255)
ggCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTg < 1:3758539/93‑1 (MQ=255)
ggCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTTTTGAAGCGTTATTTGAGGAAGACGGGTGAGTg > 2:6409727/1‑93 (MQ=255)
ggCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCCAACGGTATTTTAGGAGAACGGCTGAggg > 1:211337/1‑91 (MQ=255)
|
ATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCG > NC_000913/4298601‑4298780
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTG > NC_000913/4298598‑4298784
|
ACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTTGCAAGCGGGCCGAAAGCTGGCAGG > SRR4302547.4401995/1‑94 (MQ=60)
CGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGC > SRR4302547.6308992/1‑94 (MQ=60)
GATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCG > SRR4302547.3288940/1‑94 (MQ=60)
GATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCG < SRR4302547.3497872/94‑1 (MQ=60)
GATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCG < SRR4302547.4691882/94‑1 (MQ=60)
GATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCG > SRR4302547.4434120/1‑94 (MQ=60)
GATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGCGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGGTGGCAGGCG < SRR4302547.6637593/94‑1 (MQ=60)
TTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTG < SRR4302547.3926749/94‑1 (MQ=60)
TTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTG < SRR4302547.1547850/94‑1 (MQ=60)
TGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGT > SRR4302547.4975666/1‑94 (MQ=60)
GATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTT < SRR4302547.3517174/94‑1 (MQ=60)
GATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGGGTT > SRR4302547.5044647/1‑94 (MQ=60)
ATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTG > SRR4302547.2027383/1‑94 (MQ=60)
ATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTG < SRR4302547.5168492/94‑1 (MQ=60)
CATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCT < SRR4302547.3207469/94‑1 (MQ=60)
CATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCT > SRR4302547.1943565/1‑94 (MQ=60)
ATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTC > SRR4302547.3260956/1‑94 (MQ=60)
TTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCC < SRR4302547.4019884/94‑1 (MQ=60)
TGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCT < SRR4302547.4405516/94‑1 (MQ=60)
GCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTG < SRR4302547.6177743/94‑1 (MQ=60)
TGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTT > SRR4302547.1088049/1‑94 (MQ=60)
TGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTT < SRR4302547.6176875/94‑1 (MQ=60)
GGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTT < SRR4302547.1419138/94‑1 (MQ=60)
GCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTA > SRR4302547.2081935/1‑94 (MQ=60)
GCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGCGTTGCTCCTGTTTTA > SRR4302547.4978359/1‑94 (MQ=60)
CTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAA > SRR4302547.1701716/1‑94 (MQ=60)
TCCTTGTGCCTGTTCCGTTGCGGGCGTTAATGCCCGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGCTTTTAT > SRR4302547.5775923/1‑94 (MQ=60)
TCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTACT > SRR4302547.3857505/1‑94 (MQ=60)
CTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCCGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAA > SRR4302547.4197377/1‑94 (MQ=60)
CTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTTATAA > SRR4302547.6361326/1‑94 (MQ=60)
CTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAA < SRR4302547.4519144/94‑1 (MQ=60)
CTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAA > SRR4302547.5445450/1‑94 (MQ=60)
TTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAG < SRR4302547.3492339/94‑1 (MQ=60)
TGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGG < SRR4302547.2055509/94‑1 (MQ=60)
TGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTG > SRR4302547.4091568/1‑94 (MQ=60)
TGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTG < SRR4302547.6750543/94‑1 (MQ=60)
TGCCTGTTCCGTGGCGGGCGATAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGGTGCTCCTGTTTTTATTAGGTG > SRR4302547.2968791/1‑94 (MQ=60)
GCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGG < SRR4302547.6429478/94‑1 (MQ=60)
GCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGG > SRR4302547.6607532/1‑94 (MQ=60)
GCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGG > SRR4302547.5373119/1‑94 (MQ=60)
GCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGG < SRR4302547.3844256/94‑1 (MQ=60)
GCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTCGCTCCTGTTTTAATAAGGTGG < SRR4302547.6532039/94‑1 (MQ=60)
CCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGG > SRR4302547.2032096/1‑94 (MQ=60)
CTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGC < SRR4302547.3571560/94‑1 (MQ=60)
CTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGC > SRR4302547.4966718/1‑94 (MQ=60)
CTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGC < SRR4302547.1629176/94‑1 (MQ=60)
TTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGG > SRR4302547.847467/1‑94 (MQ=60)
TTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGG < SRR4302547.4018131/94‑1 (MQ=60)
CCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGAT < SRR4302547.2196386/94‑1 (MQ=60)
CCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGAT < SRR4302547.5080558/94‑1 (MQ=60)
CCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGGGTTGCTCCTGTTTTTATAAGGAGGGCAGGAT > SRR4302547.4784716/1‑94 (MQ=60)
CGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATG > SRR4302547.258639/1‑94 (MQ=60)
GTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGG > SRR4302547.4878191/1‑94 (MQ=60)
GGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCC < SRR4302547.6008428/94‑1 (MQ=60)
CGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTG < SRR4302547.5167642/94‑1 (MQ=60)
GGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGA > SRR4302547.780924/1‑94 (MQ=60)
GGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAG > SRR4302547.1316886/1‑94 (MQ=60)
GGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAG > SRR4302547.800870/1‑94 (MQ=60)
GGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAG > SRR4302547.6115491/1‑94 (MQ=60)
GCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGAGGGCCTGAGA < SRR4302547.6615671/94‑1 (MQ=60)
CGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAG < SRR4302547.3479385/94‑1 (MQ=60)
CGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAG > SRR4302547.3201310/1‑94 (MQ=60)
CGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAG > SRR4302547.4150657/1‑94 (MQ=60)
CGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAG < SRR4302547.3979865/94‑1 (MQ=60)
CGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAG < SRR4302547.3235896/94‑1 (MQ=60)
GTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGG > SRR4302547.4459276/1‑94 (MQ=60)
GTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGG < SRR4302547.1604336/94‑1 (MQ=60)
GTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGG > SRR4302547.225991/1‑94 (MQ=60)
GTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGGGGGCAGGATGGCCTGAGAGG > SRR4302547.1415686/1‑94 (MQ=60)
AATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGG > SRR4302547.3398163/1‑94 (MQ=60)
ATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGG < SRR4302547.1961569/94‑1 (MQ=60)
TGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGG > SRR4302547.1403374/1‑94 (MQ=60)
TGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGG > SRR4302547.2335948/1‑94 (MQ=60)
GCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGCGGCGGGTG < SRR4302547.6446488/94‑1 (MQ=60)
gcgtGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGT < SRR4302547.4864091/90‑1 (MQ=60)
CCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGT < SRR4302547.6091420/94‑1 (MQ=60)
CCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGT > SRR4302547.6364930/1‑94 (MQ=60)
GGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGgggct > SRR4302547.4814517/1‑89 (MQ=60)
GGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCT > SRR4302547.4544261/1‑94 (MQ=60)
GGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTT > SRR4302547.160527/1‑94 (MQ=60)
GGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCT < SRR4302547.4606630/94‑1 (MQ=60)
GGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCT < SRR4302547.5146311/94‑1 (MQ=60)
GGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCT < SRR4302547.6785976/94‑1 (MQ=60)
GGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCT < SRR4302547.3604085/94‑1 (MQ=60)
GGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCT > SRR4302547.552860/1‑94 (MQ=60)
GCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTT < SRR4302547.4683352/94‑1 (MQ=60)
TGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCA < SRR4302547.1287288/94‑1 (MQ=60)
CCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGggtgtctttaaac > SRR4302547.1370938/1‑81 (MQ=60)
CCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGGCTCTTCAAag > SRR4302547.1734291/1‑92 (MQ=60)
CAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGggtgtctttcagag > SRR4302547.2579582/1‑80 (MQ=60)
CAGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCAAGCG > SRR4302547.3445756/1‑94 (MQ=60)
AGTCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGT > SRR4302547.5510742/1‑94 (MQ=60)
TCTGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTA > SRR4302547.2056514/1‑94 (MQ=60)
TGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATT < SRR4302547.3038303/94‑1 (MQ=60)
TGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTTCAGCGTTTTT > SRR4302547.3164744/1‑94 (MQ=60)
TGGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCAAGCGGTATT > SRR4302547.6054689/1‑94 (MQ=60)
GGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGgggctttttaagcggttttt > SRR4302547.2513747/1‑74 (MQ=60)
GGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTTTTT > SRR4302547.4768512/1‑94 (MQ=60)
GGCAAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCAAGCGTTATTT > SRR4302547.697009/1‑94 (MQ=60)
CAAGCGGGCGAAAAGCTGGCCGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTTA > SRR4302547.6603394/1‑94 (MQ=60)
AAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAG < SRR4302547.776340/94‑1 (MQ=60)
AAGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAG < SRR4302547.2008437/94‑1 (MQ=60)
AGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGG < SRR4302547.2192387/94‑1 (MQ=60)
AGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGG < SRR4302547.2514916/94‑1 (MQ=60)
AGCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCCGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCCAGCGTCATTTTAGG > SRR4302547.5972139/1‑94 (MQ=60)
GCGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGA < SRR4302547.756399/94‑1 (MQ=60)
CGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTTAGGAG > SRR4302547.4362385/1‑94 (MQ=60)
CGGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCCAGCGTTTTTTGAGGAG > SRR4302547.6555175/1‑94 (MQ=60)
GGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCAAGCGTTATTTTAGGAGA > SRR4302547.5797394/1‑94 (MQ=60)
GGGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCAAGCGGTATTTTAGGAGA > SRR4302547.1529783/1‑94 (MQ=60)
GGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGTCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAA < SRR4302547.286592/94‑1 (MQ=60)
GGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAA < SRR4302547.5468223/94‑1 (MQ=60)
GGCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCAAGCGTTATTTTAGGAGAA > SRR4302547.1732704/1‑94 (MQ=60)
GCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAAC < SRR4302547.291010/94‑1 (MQ=60)
GCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAAC < SRR4302547.4515791/94‑1 (MQ=60)
GCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAAC < SRR4302547.5290563/94‑1 (MQ=60)
GCGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAAC < SRR4302547.5747654/94‑1 (MQ=60)
CGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACG < SRR4302547.1020113/94‑1 (MQ=60)
CGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACG < SRR4302547.1051787/94‑1 (MQ=60)
CGAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTTTCTTTAAGCGTTATTTtagggagacg > SRR4302547.4507373/1‑84 (MQ=60)
GAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCCAGCGTTATTTGAGGAGAACGG > SRR4302547.6009554/1‑94 (MQ=60)
GAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGG < SRR4302547.2481846/94‑1 (MQ=60)
GAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTttagcggttttttaggagaaagg > SRR4302547.5909720/1‑71 (MQ=60)
GAAAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCTTCCAGCGTTATTTGAGGAGAACGG > SRR4302547.1982376/1‑94 (MQ=60)
AAAGCTGGGAGGCGTGTTGCTGCTGTTTTAAGAAGGTGGGCAGGAAGACCTGAGAGGCGGGGGTGTCTTCAGTGGTTATTTGAGGAGAACGGCG > SRR4302547.4058180/1‑94 (MQ=30)
AAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCT < SRR4302547.3297203/94‑1 (MQ=60)
AAAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTTTTCAAGCGTTATTTGAGGAGGACGGCT > SRR4302547.4997447/1‑94 (MQ=60)
AAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGgggctctttcaacggtattttaggaggaagggcg > SRR4302547.47383/1‑60 (MQ=60)
AAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTgtctttcaccggtttttttggggaaagggct > SRR4302547.47914/1‑63 (MQ=60)
AAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTG < SRR4302547.622836/94‑1 (MQ=60)
AAGCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCAAGCGGTATTTGAGGAGAACGGGTG > SRR4302547.1971182/1‑94 (MQ=60)
GCTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGAGGGCCTGAGAGGCGGGGGGCCCTTCAAGGGTTATTTGAGGAGgaggggtggg > SRR4302547.5502514/1‑84 (MQ=60)
CTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGT < SRR4302547.1081073/94‑1 (MQ=60)
CTGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGT < SRR4302547.2624508/94‑1 (MQ=60)
TGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTG < SRR4302547.5751791/94‑1 (MQ=60)
TGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGTCTCCTCAAGCGGTATTTTAGGAGAAAGGCTGgggg > SRR4302547.3690777/1‑90 (MQ=60)
TGGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGGGGCTCTTCCAACGGTATTTTAGGAGAACGGCTGAGGG > SRR4302547.215319/1‑94 (MQ=60)
GGCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGC < SRR4302547.3835230/94‑1 (MQ=60)
GCAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCG < SRR4302547.2151173/94‑1 (MQ=60)
CAGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGG > SRR4302547.864149/1‑94 (MQ=60)
AGGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGT < SRR4302547.422194/94‑1 (MQ=60)
GGCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGgggctctttaaacggttttttagggggaaggcggggggcggtt > SRR4302547.4825305/1‑51 (MQ=60)
GCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTG < SRR4302547.6304721/94‑1 (MQ=60)
GCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTG < SRR4302547.3259517/94‑1 (MQ=60)
GCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTG < SRR4302547.1676314/94‑1 (MQ=60)
GCGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGATG < SRR4302547.4273835/94‑1 (MQ=60)
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ACGATTGATCATTGCGTGGCTCCTTGTGCCTGTTCCGTGGCGGGCGTTAATGCCGGGGCTGTCCAGTCTGGCAAGCGGGCGAAAAGCTGGCAGACGTGTTGCTCCTGTTTTAATAAGGTGGGCAGGATGGCCTGAGAGGCGGGTGTCTCTTCAAGCGTTATTTGAGGAGAACGGCTGAGTGCGGTTG > NC_000913/4298598‑4298784
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
