Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,786,195 |
T→C |
L243L (TTG→CTG) |
ydiA → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,786,195 | 0 | T | C | 83.1%
| 503.1
/ 89.7
| 207 | L243L (TTG→CTG) | ydiA | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (23/12); new base C (96/76); total (119/88) |
| Fisher's exact test for biased strand distribution p-value = 3.49e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.88e-01 |
Only 100 of 213 total aligned reads displayed.
ACGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTTAG > NC_000913/1786104‑1786286
|
aCGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCtt > 2:400775/1‑93 (MQ=255)
gTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGt > 1:761523/1‑93 (MQ=255)
gTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGt > 2:2288173/1‑93 (MQ=255)
tCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTa > 2:5652477/1‑93 (MQ=255)
cTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTAc > 1:5821687/1‑93 (MQ=255)
ggcggcGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCg > 2:1007781/1‑93 (MQ=255)
gcggcgATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGt > 2:3415697/1‑93 (MQ=255)
gcggcgATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGt > 2:6585257/1‑93 (MQ=255)
cggcgATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTa > 2:4574970/1‑93 (MQ=255)
ggcgATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTaa > 1:110555/1‑93 (MQ=255)
ggcgATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTaa < 1:1157467/93‑1 (MQ=255)
gcgATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTAGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTaaa > 2:4311655/1‑93 (MQ=255)
gATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTaaaaa > 2:3814409/1‑93 (MQ=255)
aTTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAAt > 2:4967656/1‑93 (MQ=255)
ttCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCTCGGAAGTGGAAGCCTTGTACCGTAAAAATc > 1:364928/1‑93 (MQ=255)
cgcgAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAg < 2:2002911/93‑1 (MQ=255)
gcgAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGa < 1:791975/93‑1 (MQ=255)
gcgAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGa < 1:2345309/93‑1 (MQ=255)
gcgAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGa > 1:6514061/1‑93 (MQ=255)
cgAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGAt > 2:3328884/1‑93 (MQ=255)
gAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATc < 1:14039/93‑1 (MQ=255)
gAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATc > 1:1727746/1‑93 (MQ=255)
gAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATc > 2:1294960/1‑93 (MQ=255)
gAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATc < 2:3157403/93‑1 (MQ=255)
gAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATc < 2:2563157/93‑1 (MQ=255)
gAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATc > 1:1953291/1‑93 (MQ=255)
gggAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATcc < 1:4917765/92‑1 (MQ=255)
aGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATcc > 2:4245263/1‑93 (MQ=255)
aGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATcc < 2:3054632/93‑1 (MQ=255)
aaCGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGt < 1:6579447/93‑1 (MQ=255)
aCGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTg > 2:3076809/1‑93 (MQ=255)
tCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATAAGATCCCGTGGAt > 1:2852826/1‑93 (MQ=255)
cGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGAtt < 2:3028925/93‑1 (MQ=255)
cGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGAtt > 1:3296874/1‑93 (MQ=255)
cGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGAtt < 2:6448318/93‑1 (MQ=255)
gggAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTa > 2:3673114/1‑93 (MQ=255)
ggAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTaa > 1:5800130/1‑93 (MQ=255)
gaACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTACAAATCAGATCCCGTGGATTAACAg > 2:3758701/1‑93 (MQ=255)
gaACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAg > 2:1966723/1‑93 (MQ=255)
gaACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAg > 2:6280813/1‑93 (MQ=255)
aaCAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGt > 2:940460/1‑93 (MQ=255)
aCAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTa < 2:6497854/93‑1 (MQ=255)
cAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTAc < 1:4547473/93‑1 (MQ=255)
gTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCa > 2:2861715/1‑93 (MQ=255)
gTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCa > 1:459192/1‑93 (MQ=255)
tCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCaa < 1:6212275/93‑1 (MQ=255)
cGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAat < 1:5728892/93‑1 (MQ=255)
cTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAatta < 2:1394406/93‑1 (MQ=255)
cTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAatta > 1:735135/1‑93 (MQ=255)
tATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAattat > 2:6196678/1‑93 (MQ=255)
aTGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAattatt > 1:2154791/1‑93 (MQ=255)
tGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTc > 2:112394/1‑93 (MQ=255)
gCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCg < 1:5568987/93‑1 (MQ=255)
ccTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCgg < 1:3679367/93‑1 (MQ=255)
gtCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGt > 1:6382193/2‑93 (MQ=255)
cTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGt < 1:5685216/93‑1 (MQ=255)
cTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGt > 2:1570970/1‑93 (MQ=255)
cTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGt < 2:6557584/93‑1 (MQ=255)
tCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTa < 2:219600/93‑1 (MQ=255)
tCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTa > 2:1629812/1‑93 (MQ=255)
gCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTaga < 2:147522/93‑1 (MQ=255)
ttCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTagaag > 1:3494521/1‑93 (MQ=255)
tCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAGAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTagaaga > 1:4271767/1‑93 (MQ=255)
tCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTagaaga < 2:3995021/93‑1 (MQ=255)
tCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTagaaga < 1:6069747/93‑1 (MQ=255)
tgTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAagag < 2:2087172/92‑1 (MQ=255)
cGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAagag < 1:4791274/93‑1 (MQ=255)
gTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAgaga < 2:5236841/93‑1 (MQ=255)
tCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGAt < 1:4509439/93‑1 (MQ=255)
cAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGAtt > 1:4010673/1‑93 (MQ=255)
aGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTg > 1:2708335/1‑93 (MQ=255)
aGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTg > 2:6006451/1‑93 (MQ=255)
aGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTg > 2:4068624/1‑93 (MQ=255)
cAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGccac > 2:4754225/1‑93 (MQ=255)
cAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGccac > 2:3469814/1‑93 (MQ=255)
aGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGccacc < 1:1249749/93‑1 (MQ=255)
aGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGccacc > 2:6075553/1‑93 (MQ=255)
aGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGccacc < 2:5600504/93‑1 (MQ=255)
aGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGccacc < 1:4362173/93‑1 (MQ=255)
ggATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGccccca > 1:3815200/1‑93 (MQ=255)
tGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGa < 1:4461227/93‑1 (MQ=255)
gAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATc < 2:1550470/93‑1 (MQ=255)
aaGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATcc > 2:798236/1‑93 (MQ=255)
aGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCt < 2:5949292/93‑1 (MQ=255)
aGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCt < 1:2042108/93‑1 (MQ=255)
gTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTc > 1:1496539/1‑93 (MQ=255)
gTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTc > 1:1549143/1‑93 (MQ=255)
gTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTc > 2:5748977/1‑93 (MQ=255)
tCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCg > 1:3584002/1‑93 (MQ=255)
tCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCg > 2:5355233/1‑93 (MQ=255)
gcgGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGat > 1:4146602/1‑93 (MQ=255)
gcgGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGat < 2:5418024/93‑1 (MQ=255)
ggAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGatat > 2:2685330/1‑93 (MQ=255)
gAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATc > 1:3043020/1‑93 (MQ=255)
ggAAGCCCTGTACCGTAAAAATCAGATCTCGTGGATTAACAGTACCAATTATTCGGTCGAAGAGACTGCCACCAAGATCCTCGATATCATagg > 2:2762249/1‑93 (MQ=255)
agAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATggg > 2:2343184/2‑93 (MQ=255)
gAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGc > 2:2264062/1‑93 (MQ=255)
gAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGc > 2:2942955/1‑93 (MQ=255)
gAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGc > 2:865538/1‑93 (MQ=255)
gCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCtt > 1:240142/1‑93 (MQ=255)
|
ACGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTTAG > NC_000913/1786104‑1786286
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AACGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTTAGTC > NC_000913/1786103‑1786288
|
AACGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCT < SRR4302547.2508084/94‑1 (MQ=60)
ACGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTG < SRR4302547.5225618/94‑1 (MQ=60)
CGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGT > SRR4302547.775884/1‑94 (MQ=60)
CGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGT > SRR4302547.3489134/1‑94 (MQ=60)
TCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTAC > SRR4302547.5942126/1‑94 (MQ=60)
TCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTAC > SRR4302547.1550335/1‑94 (MQ=60)
TGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCG > SRR4302547.4690264/1‑94 (MQ=60)
CGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAA > SRR4302547.112574/1‑94 (MQ=60)
CGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAA > SRR4302547.6283904/1‑94 (MQ=60)
GGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAA < SRR4302547.1180886/94‑1 (MQ=60)
GGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAA > SRR4302547.1581338/1‑94 (MQ=60)
CGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAA < SRR4302547.2890606/94‑1 (MQ=60)
GATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAAT < SRR4302547.4684623/94‑1 (MQ=60)
ATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCTCGGAAGTGGAAGCCTTGTACCGTAAAAATC > SRR4302547.371703/1‑94 (MQ=60)
TCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAG < SRR4302547.572297/94‑1 (MQ=60)
CGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGA > SRR4302547.6649670/1‑94 (MQ=60)
GCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGAT < SRR4302547.806964/94‑1 (MQ=60)
GCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGAT > SRR4302547.4608343/1‑94 (MQ=60)
GCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGAT < SRR4302547.2392842/94‑1 (MQ=60)
CGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATC > SRR4302547.1761688/1‑94 (MQ=60)
CGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATC > SRR4302547.1992035/1‑94 (MQ=60)
CGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATC > SRR4302547.6498139/1‑94 (MQ=60)
GAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCC < SRR4302547.5920832/94‑1 (MQ=60)
GAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCC > SRR4302547.2384917/1‑94 (MQ=60)
GAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCC < SRR4302547.14297/94‑1 (MQ=60)
GGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCC < SRR4302547.5019623/94‑1 (MQ=60)
AGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCC > SRR4302547.6515588/1‑94 (MQ=60)
AGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCC > SRR4302547.776377/1‑94 (MQ=60)
GAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGT < SRR4302547.6566547/94‑1 (MQ=60)
AACGTCGGGAGAGCAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTG < SRR4302547.3434913/94‑1 (MQ=60)
AACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTG < SRR4302547.6716454/94‑1 (MQ=60)
GTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATAAGATCCCGTGGAT > SRR4302547.2909841/1‑94 (MQ=60)
TCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATT > SRR4302547.3363184/1‑94 (MQ=60)
CGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTA > SRR4302547.4596076/1‑94 (MQ=60)
GGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAA > SRR4302547.5920121/1‑94 (MQ=60)
GGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAA > SRR4302547.1248359/1‑94 (MQ=60)
GGTGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTTGAAGTCCTGTACCGTAAAAATCATATCCCGTGGATTAAC > SRR4302547.3685318/1‑94 (MQ=60)
GAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACA < SRR4302547.1515651/94‑1 (MQ=60)
AAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACA > SRR4302547.21500/1‑94 (MQ=60)
AGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAG < SRR4302547.3736156/94‑1 (MQ=60)
AACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTA < SRR4302547.4409444/94‑1 (MQ=60)
CAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACC < SRR4302547.4641521/94‑1 (MQ=60)
AGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCA > SRR4302547.467677/1‑94 (MQ=60)
TCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAAT < SRR4302547.6341282/94‑1 (MQ=60)
CGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATT < SRR4302547.5847239/94‑1 (MQ=60)
GCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTA > SRR4302547.748881/1‑94 (MQ=60)
TATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATT > SRR4302547.2197823/1‑94 (MQ=60)
ATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTC < SRR4302547.2578858/94‑1 (MQ=60)
GCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGG < SRR4302547.5683818/94‑1 (MQ=60)
CGTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGT > SRR4302547.6515375/1‑94 (MQ=60)
CCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGT > SRR4302547.442847/1‑94 (MQ=60)
CCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGT > SRR4302547.4148428/1‑94 (MQ=60)
CCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGT < SRR4302547.3754485/94‑1 (MQ=60)
CTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTA < SRR4302547.5802603/94‑1 (MQ=60)
TCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAG > SRR4302547.2031095/1‑94 (MQ=60)
CGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGA < SRR4302547.5027916/94‑1 (MQ=60)
CTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAG < SRR4302547.6043848/94‑1 (MQ=60)
CTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAG > SRR4302547.3565830/1‑94 (MQ=60)
TTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAGAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGA > SRR4302547.4359449/1‑94 (MQ=60)
TCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAG < SRR4302547.6195646/94‑1 (MQ=60)
CGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGA < SRR4302547.4890551/94‑1 (MQ=60)
TCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATT < SRR4302547.4602599/94‑1 (MQ=60)
TCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATT < SRR4302547.5118188/94‑1 (MQ=60)
TCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATT > SRR4302547.4092195/1‑94 (MQ=60)
CAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTG > SRR4302547.2762708/1‑94 (MQ=60)
CAGTGCAGGATGCAACTCGCGGCAGTGGAAGCCCTGTACCGTACAACTCAGACCCCGTGGATTAACAGTCCCAATTATTCGGTAGAAGAGATTG < SRR4302547.2006432/94‑1 (MQ=60)
GTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCC < SRR4302547.4251032/94‑1 (MQ=60)
GTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCC < SRR4302547.5851781/94‑1 (MQ=60)
TGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCA > SRR4302547.202410/1‑94 (MQ=60)
CAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACC < SRR4302547.3623800/94‑1 (MQ=60)
CAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACC > SRR4302547.3772770/1‑94 (MQ=60)
AGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCCCCA > SRR4302547.3892934/1‑94 (MQ=60)
AGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCA < SRR4302547.1274967/94‑1 (MQ=60)
AGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCA > SRR4302547.4497089/1‑94 (MQ=60)
AGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCA < SRR4302547.4451757/94‑1 (MQ=60)
GGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAA < SRR4302547.2444977/94‑1 (MQ=60)
TGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGAT < SRR4302547.4553430/94‑1 (MQ=60)
AAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCT > SRR4302547.493519/1‑94 (MQ=60)
AGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTC > SRR4302547.1579982/1‑94 (MQ=60)
AGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTC > SRR4302547.1526394/1‑94 (MQ=60)
AGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTC < SRR4302547.2082841/94‑1 (MQ=60)
GTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCG > SRR4302547.3657125/1‑94 (MQ=60)
CGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGAT > SRR4302547.4231019/1‑94 (MQ=60)
CGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGAT < SRR4302547.6771782/94‑1 (MQ=60)
CGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGAT < SRR4302547.764927/94‑1 (MQ=60)
GCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATA > SRR4302547.6683574/1‑94 (MQ=60)
CGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATAT < SRR4302547.5806759/94‑1 (MQ=60)
CGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATAT < SRR4302547.187797/94‑1 (MQ=60)
GGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATC > SRR4302547.3103581/1‑94 (MQ=60)
GAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCA < SRR4302547.4091637/94‑1 (MQ=60)
AGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATGCTCGATATCATG > SRR4302547.1169218/1‑94 (MQ=60)
TGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGG > SRR4302547.3254997/1‑94 (MQ=60)
TGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGG > SRR4302547.932124/1‑94 (MQ=60)
AAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCT < SRR4302547.2945599/94‑1 (MQ=60)
AGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTT > SRR4302547.244637/1‑94 (MQ=60)
CCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCCAGATCCTCGATATCATGGGCCTTAG > SRR4302547.1416857/1‑94 (MQ=60)
CCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTTAG > SRR4302547.5363097/1‑94 (MQ=60)
CCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTTAGT > SRR4302547.6183816/1‑94 (MQ=60)
CCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTTAGT < SRR4302547.5070454/94‑1 (MQ=60)
CTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTTAGTC > SRR4302547.4336793/1‑94 (MQ=60)
CTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTTAGTC > SRR4302547.3832193/1‑94 (MQ=60)
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AACGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTTAGTC > NC_000913/1786103‑1786288
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
