Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,870,206 |
T→C |
S108P (TCC→CCC) |
yeaJ → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,870,206 | 0 | T | C | 86.2%
| 520.7
/ 73.2
| 203 | S108P (TCC→CCC) | yeaJ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (17/11); new base C (92/83); total (109/94) |
| Fisher's exact test for biased strand distribution p-value = 5.41e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.66e-01 |
Only 100 of 214 total aligned reads displayed.
GTGCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCAGA > NC_000913/1870116‑1870297
|
gtgCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGActcc < 2:1606435/93‑1 (MQ=255)
gtgCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGAcccc < 1:3598691/93‑1 (MQ=255)
tgCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGAcccct < 1:1210698/93‑1 (MQ=255)
tgCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGAcccct > 1:6620066/1‑93 (MQ=255)
gCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGAcccctc > 1:1281066/1‑93 (MQ=255)
tGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCcctcct < 1:6335868/93‑1 (MQ=255)
aCATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCcttt < 1:821395/93‑1 (MQ=255)
aTCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCctttct > 2:435317/1‑93 (MQ=255)
tCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCctttctt < 2:3123403/93‑1 (MQ=255)
tCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCctttctt < 2:1773761/93‑1 (MQ=255)
cttccttcCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCctttcttt > 2:167124/1‑93 (MQ=255)
ttccttccTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTa > 2:2591981/1‑93 (MQ=255)
tccttcctTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTAt < 2:3451838/93‑1 (MQ=255)
tccttcctTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTAt < 1:369418/93‑1 (MQ=255)
ccttccttATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATg < 2:5607910/93‑1 (MQ=255)
cttccttATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGa > 1:1471592/1‑93 (MQ=255)
ttccttATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGAt < 2:2544364/93‑1 (MQ=255)
tccttATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATa > 1:222431/1‑93 (MQ=255)
tccttATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATa > 1:2482669/1‑93 (MQ=255)
ttATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGt > 2:2327961/1‑93 (MQ=255)
ttATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGt > 1:2158333/1‑93 (MQ=255)
tATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTa < 1:2336958/93‑1 (MQ=255)
aTTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTat < 1:1768366/93‑1 (MQ=255)
aTTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTat > 1:4078906/1‑93 (MQ=255)
ttttGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTatca < 2:224154/93‑1 (MQ=255)
tGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTatcagaa < 1:2950661/93‑1 (MQ=255)
gAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTatcagaat > 2:2749682/1‑93 (MQ=255)
aaCTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTatcagaatc > 1:4257290/1‑93 (MQ=255)
aaCTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTatcagaatc > 1:334173/1‑93 (MQ=255)
aaCTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTatcagaatc < 2:4012135/93‑1 (MQ=255)
cTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTatcagaatcag > 2:2108505/1‑93 (MQ=255)
cTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTatcagaatcag > 1:916632/1‑93 (MQ=255)
ttGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTatcagaatcaga > 2:6499045/1‑93 (MQ=255)
ttGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTatcagaatcaga < 2:4780787/93‑1 (MQ=255)
ttGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTatcagaatcaga < 1:5130210/93‑1 (MQ=255)
tGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCagag < 2:617262/93‑1 (MQ=255)
gCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTAtt < 2:1830195/93‑1 (MQ=255)
gCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTAtt > 2:408010/1‑93 (MQ=255)
ccAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTg > 1:3417457/1‑93 (MQ=255)
ccAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTg > 1:6100989/1‑93 (MQ=255)
cAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGc < 2:2844503/93‑1 (MQ=255)
aGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGcc > 2:4742110/1‑93 (MQ=255)
gCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCcg > 1:1680455/1‑93 (MQ=255)
cGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCcgc < 2:4384619/93‑1 (MQ=255)
cAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCa > 2:2975903/1‑93 (MQ=255)
gagGAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCAtg > 2:3836622/1‑93 (MQ=255)
gagCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCAtg > 2:3678544/1‑93 (MQ=255)
gCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCAtgtg < 1:1894772/93‑1 (MQ=255)
cAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGa > 2:4045093/1‑93 (MQ=255)
cAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGa < 2:5395167/93‑1 (MQ=255)
gaTGAGTGCCTATCTGCGCTATATCGTGCAGAACGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCCCATGTGAt < 2:3282829/92‑1 (MQ=255)
aaTGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGAt > 1:1409946/1‑93 (MQ=255)
aaTGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGAt > 2:3539080/1‑93 (MQ=255)
aaTGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGAt > 1:3005465/1‑93 (MQ=255)
aaTGAGTGACTATCTGCGCAATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGAt > 1:6442457/1‑93 (MQ=255)
aTGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATg < 1:2204368/93‑1 (MQ=255)
aTGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATg > 1:5847093/1‑93 (MQ=255)
aTGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATg > 2:5796480/1‑93 (MQ=255)
tGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATgc < 2:1565294/93‑1 (MQ=255)
tGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATgc < 1:3965235/93‑1 (MQ=255)
tGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATgc < 1:3636394/93‑1 (MQ=255)
aGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATgcgc < 2:52901/93‑1 (MQ=255)
gCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGct > 2:6078470/1‑93 (MQ=255)
tATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCtctc > 2:1454683/1‑93 (MQ=255)
tGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCgctg > 2:956244/1‑93 (MQ=255)
tGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCgctg < 2:1731303/93‑1 (MQ=255)
gcgcTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCgctgc < 1:3119876/93‑1 (MQ=255)
gcgcTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCgctgc < 1:6033649/93‑1 (MQ=255)
cgcTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCgctgct < 1:4419884/93‑1 (MQ=255)
gcTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGctgctg < 1:3764794/93‑1 (MQ=255)
tataTCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAg < 2:1557607/93‑1 (MQ=255)
tataTCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAg > 2:6376770/1‑93 (MQ=255)
tataTCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAg > 1:1638904/1‑93 (MQ=255)
tataTCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAg > 2:4568944/1‑93 (MQ=255)
atatCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGc < 2:2372350/93‑1 (MQ=255)
tatCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGAATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCa > 1:718985/1‑93 (MQ=255)
atCGTGCGGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAg > 1:2045425/1‑93 (MQ=255)
atCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAg > 2:1220494/1‑93 (MQ=255)
tCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGt > 1:6527724/1‑93 (MQ=255)
tCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGt < 1:2737656/93‑1 (MQ=255)
cGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTc < 1:3985985/93‑1 (MQ=255)
gTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCg > 2:1935749/1‑93 (MQ=255)
gTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGCGCAGTCg < 1:5372024/93‑1 (MQ=255)
gTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCg < 2:4925667/93‑1 (MQ=255)
gTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCg < 1:1919399/93‑1 (MQ=255)
tGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCgg < 2:1142069/93‑1 (MQ=255)
gCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGa < 2:697019/93‑1 (MQ=255)
cAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGaa < 2:5509771/93‑1 (MQ=255)
gAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAgt > 1:4890251/1‑93 (MQ=255)
aaaGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAgtg > 2:572052/1‑93 (MQ=255)
aaGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAgtgt > 1:4343523/1‑93 (MQ=255)
aGCAGTCTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTc > 2:2357281/1‑93 (MQ=255)
aGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTc < 1:1049899/93‑1 (MQ=255)
aGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGcc < 1:6226913/93‑1 (MQ=255)
aGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGcc > 1:758622/1‑93 (MQ=255)
gACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCa > 2:5182291/1‑93 (MQ=255)
gACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCa > 1:4491896/1‑93 (MQ=255)
gACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCa > 2:944776/1‑93 (MQ=255)
gACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGACa > 2:2048720/1‑93 (MQ=255)
ctcctcCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCAGa > 2:5436595/1‑93 (MQ=255)
|
GTGCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCAGA > NC_000913/1870116‑1870297
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTGTGCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCAGA > NC_000913/1870113‑1870297
|
ATTGTGCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACC < SRR4302547.2765761/94‑1 (MQ=60)
TTGTGCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCC > SRR4302547.54601/1‑94 (MQ=60)
GTGCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCT < SRR4302547.3672074/94‑1 (MQ=60)
GTGCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCT > SRR4302547.6757857/1‑94 (MQ=60)
TGCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTC < SRR4302547.1235131/94‑1 (MQ=60)
TGCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTC > SRR4302547.1306860/1‑94 (MQ=60)
TGCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTC < SRR4302547.6740494/94‑1 (MQ=60)
CTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCT < SRR4302547.1178312/94‑1 (MQ=60)
CTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCT > SRR4302547.1307434/1‑94 (MQ=60)
TGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTT > SRR4302547.4389680/1‑94 (MQ=60)
TGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTT < SRR4302547.6467790/94‑1 (MQ=60)
ACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTC < SRR4302547.837052/94‑1 (MQ=60)
ACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTC > SRR4302547.5813497/1‑94 (MQ=60)
CATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCT > SRR4302547.1723401/1‑94 (MQ=60)
ATCTTTCTTCCTTATTTTGGAACTTGTCTCCAGCGACAGAGCAAAGAGTGCCTATCAGCGCGTTATCGTGCAGAAAGCAGACCCCTCCTTTCTT > SRR4302547.6779469/1‑94 (MQ=60)
ATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTT > SRR4302547.2925290/1‑94 (MQ=60)
CTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTA > SRR4302547.3951723/1‑94 (MQ=60)
CTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTA > SRR4302547.1814624/1‑94 (MQ=60)
TTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTAT < SRR4302547.1828568/94‑1 (MQ=60)
TCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATT > SRR4302547.823346/1‑94 (MQ=60)
TCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATG < SRR4302547.376265/94‑1 (MQ=60)
TCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATG > SRR4302547.5091813/1‑94 (MQ=60)
CCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGA > SRR4302547.1500986/1‑94 (MQ=60)
CTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGAT > SRR4302547.6657662/1‑94 (MQ=60)
CTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGAT < SRR4302547.193383/94‑1 (MQ=60)
TTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATA > SRR4302547.4195151/1‑94 (MQ=60)
TTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATA > SRR4302547.226613/1‑94 (MQ=60)
TTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATA > SRR4302547.2532841/1‑94 (MQ=60)
TCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAA < SRR4302547.2108110/94‑1 (MQ=60)
CCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAG < SRR4302547.2415212/94‑1 (MQ=60)
CTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGT > SRR4302547.2201467/1‑94 (MQ=60)
CTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGT > SRR4302547.1704780/1‑94 (MQ=60)
TATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTAT > SRR4302547.4161794/1‑94 (MQ=60)
TATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTAT < SRR4302547.2384331/94‑1 (MQ=60)
ATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATC < SRR4302547.6010925/94‑1 (MQ=60)
ATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATC < SRR4302547.1803432/94‑1 (MQ=60)
TGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAAT < SRR4302547.3009410/94‑1 (MQ=60)
GAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATC > SRR4302547.340391/1‑94 (MQ=60)
GAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATC > SRR4302547.2452299/1‑94 (MQ=60)
GAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATC > SRR4302547.4344409/1‑94 (MQ=60)
AACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCA > SRR4302547.6441418/1‑94 (MQ=60)
ACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAG > SRR4302547.934323/1‑94 (MQ=60)
CTTGTCGCCAGCGACAGAGCAATGCGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGA > SRR4302547.2706479/1‑94 (MQ=60)
TTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAG < SRR4302547.5235918/94‑1 (MQ=60)
TGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGT > SRR4302547.883707/1‑94 (MQ=60)
TCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTAT < SRR4302547.1981008/94‑1 (MQ=60)
GCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTG > SRR4302547.3678178/1‑94 (MQ=60)
GCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTG > SRR4302547.3487043/1‑94 (MQ=60)
GCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTG > SRR4302547.4763928/1‑94 (MQ=60)
GCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTG > SRR4302547.6227532/1‑94 (MQ=60)
GCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTG < SRR4302547.4517310/94‑1 (MQ=60)
CAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCC > SRR4302547.2208379/1‑94 (MQ=60)
CAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCC < SRR4302547.745839/94‑1 (MQ=60)
AGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCG > SRR4302547.1713540/1‑94 (MQ=60)
AGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGACG > SRR4302547.3823381/1‑94 (MQ=60)
GCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGA < SRR4302547.1932219/94‑1 (MQ=60)
CAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGAT > SRR4302547.1438146/1‑94 (MQ=60)
CAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGAT < SRR4302547.1530196/94‑1 (MQ=60)
CAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGAT > SRR4302547.3065238/1‑94 (MQ=60)
CAATGAGTGACTATCTGCGCAATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGAT > SRR4302547.6576715/1‑94 (MQ=60)
AATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATG > SRR4302547.5968042/1‑94 (MQ=60)
ATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGC < SRR4302547.2248662/94‑1 (MQ=60)
TGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCG < SRR4302547.4045883/94‑1 (MQ=60)
TGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCG < SRR4302547.3710561/94‑1 (MQ=60)
GAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGC > SRR4302547.2347449/1‑94 (MQ=60)
AGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCG > SRR4302547.3503112/1‑94 (MQ=60)
GCCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTC < SRR4302547.6490429/94‑1 (MQ=60)
CCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCT > SRR4302547.4062784/1‑94 (MQ=60)
CCTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCT > SRR4302547.338782/1‑94 (MQ=60)
CTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTC < SRR4302547.4159489/94‑1 (MQ=60)
CTATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTC < SRR4302547.3042194/94‑1 (MQ=60)
TATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCG > SRR4302547.5591795/1‑94 (MQ=60)
ATCTGCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGC > SRR4302547.3412240/1‑94 (MQ=60)
GCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCT < SRR4302547.6158863/94‑1 (MQ=60)
GCGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCT < SRR4302547.3181735/94‑1 (MQ=60)
CGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTG < SRR4302547.4511140/94‑1 (MQ=60)
CGCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTG > SRR4302547.126480/1‑94 (MQ=60)
GCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGA < SRR4302547.3841584/94‑1 (MQ=60)
GCTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGGGATGCGCGCTCTCGCTGCTGA < SRR4302547.6176642/94‑1 (MQ=60)
CTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAG < SRR4302547.2259824/94‑1 (MQ=60)
CTATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAG > SRR4302547.1671298/1‑94 (MQ=60)
ATATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGAATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCA > SRR4302547.732339/1‑94 (MQ=60)
TATCGTGCGGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAG > SRR4302547.2086225/1‑94 (MQ=60)
TATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAG < SRR4302547.531318/94‑1 (MQ=60)
TATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAG < SRR4302547.4327169/94‑1 (MQ=60)
ATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGT > SRR4302547.6663606/1‑94 (MQ=60)
ATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGT < SRR4302547.4492670/94‑1 (MQ=60)
ATCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGT > SRR4302547.6246694/1‑94 (MQ=60)
TCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCATTC < SRR4302547.3533861/94‑1 (MQ=60)
TCGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTC < SRR4302547.2792588/94‑1 (MQ=60)
CGTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCG < SRR4302547.4067032/94‑1 (MQ=60)
GTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGCGCAGTCGG < SRR4302547.5482886/94‑1 (MQ=60)
GTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGG < SRR4302547.1469079/94‑1 (MQ=60)
GTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGG < SRR4302547.6747155/94‑1 (MQ=60)
GTGCAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGG < SRR4302547.1957413/94‑1 (MQ=60)
GTGCAGAAAGCAGACCCCTCCTTTCTTTAAGATAAGTATCAGAATCAGAGTATTGCCGCCCATGTGATGCGCGCTCTCCCTGCCTAGGAGTCGG < SRR4302547.503454/94‑1 (MQ=60)
CAGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAG < SRR4302547.3070392/94‑1 (MQ=60)
AGAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGT > SRR4302547.4991535/1‑94 (MQ=60)
GAAAGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTG < SRR4302547.3711910/94‑1 (MQ=60)
AAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGT > SRR4302547.4432819/1‑94 (MQ=60)
AGCAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCA < SRR4302547.1070703/94‑1 (MQ=60)
CAGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCC > SRR4302547.772922/1‑94 (MQ=60)
AGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCA < SRR4302547.6356237/94‑1 (MQ=60)
AGACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCA > SRR4302547.4584685/1‑94 (MQ=60)
GACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCAG > SRR4302547.6074783/1‑94 (MQ=60)
ACCCCTCCTTTCTTTATGATATGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCAGA > SRR4302547.3840779/1‑94 (MQ=60)
ACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCAGA > SRR4302547.1752836/1‑94 (MQ=60)
ACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCAGA > SRR4302547.469233/1‑94 (MQ=60)
ACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCAGA < SRR4302547.1112789/94‑1 (MQ=60)
ACCCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCAGA > SRR4302547.3220318/1‑94 (MQ=60)
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ATTGTGCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCAGA > NC_000913/1870113‑1870297
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
