Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,008,480 |
+A |
coding (637/654 nt) |
yedK → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,008,476 | 1 | . | A | 98.4%
| 695.4
/ 3.1
| 182 | coding (633/654 nt) | yedK | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base A (83/96); total (84/98) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01 |
Only 100 of 201 total aligned reads displayed.
AGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑AAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA > NC_000913/2008384‑2008563
|
gCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑a < 2:2932430/93‑1 (MQ=255)
ggTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aaa > 2:6437239/1‑93 (MQ=255)
aaaGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aaaaac < 1:1118933/93‑3 (MQ=255)
aaaGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aaaaac < 1:5767692/93‑3 (MQ=255)
aagaagCCTCAGAAATCGCGACCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aaaaacc > 2:5963694/1‑90 (MQ=255)
agaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aaaaacca < 2:3325967/93‑5 (MQ=255)
agaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aaaaacca < 2:3250101/93‑5 (MQ=255)
aagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAgg < 2:436736/93‑1 (MQ=255)
aagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAgg > 1:582270/1‑93 (MQ=255)
aagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAgg < 1:2145820/93‑1 (MQ=255)
aagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAgg < 1:2664081/93‑1 (MQ=255)
agCCTCAGAAATCGCGGCCTGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAggg > 1:6461822/1‑93 (MQ=255)
agCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAggg > 2:1758989/1‑93 (MQ=255)
ccTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGgcg < 1:4788029/93‑1 (MQ=255)
tCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGcgcg > 1:5018650/1‑93 (MQ=255)
cAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCgg < 2:4889779/93‑1 (MQ=255)
gAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAg > 2:1104107/1‑93 (MQ=255)
aaaTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGt < 1:884345/93‑1 (MQ=255)
aaTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGtt > 2:2704098/1‑93 (MQ=255)
aaTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGtt > 2:3612022/1‑93 (MQ=255)
aTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTa > 2:4397033/1‑93 (MQ=255)
aTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTa < 1:6188370/93‑1 (MQ=255)
gcgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAAtt > 2:3712375/1‑93 (MQ=255)
gCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCaa > 1:5834634/1‑93 (MQ=255)
ccAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAAc > 1:5500806/1‑93 (MQ=255)
ccAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGGTAATTCAAc > 1:3031320/1‑93 (MQ=255)
cAGTGGCTGTGTTCCAGCAACCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAAcc < 1:3883944/93‑1 (MQ=255)
cAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAAcc > 2:48188/1‑93 (MQ=255)
cAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAAcc > 2:4247587/1‑93 (MQ=255)
cAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAAcc < 1:6085503/93‑1 (MQ=255)
aGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCt > 2:6062410/1‑93 (MQ=255)
aGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCt > 1:6570470/1‑93 (MQ=255)
ggCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGtt < 2:6112056/93‑1 (MQ=255)
ggCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGtt < 1:811131/93‑1 (MQ=255)
gCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGttt < 1:337062/93‑1 (MQ=255)
gCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGttt > 2:660640/1‑93 (MQ=255)
cTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTg < 2:1291582/93‑1 (MQ=255)
tgtgTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGa > 1:2721368/1‑93 (MQ=255)
gttttCCAGCAAACCAGTGCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGAt < 2:1597637/90‑1 (MQ=255)
gtgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGAt > 2:4583343/1‑93 (MQ=255)
gtgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGAt > 2:3412240/1‑93 (MQ=255)
tgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATa > 2:1230544/1‑93 (MQ=255)
ttCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAg > 2:5163351/1‑93 (MQ=255)
tCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGc < 2:3877220/93‑1 (MQ=255)
ccAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAGT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGcc < 1:5374874/93‑1 (MQ=255)
aGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTg > 1:1549429/1‑93 (MQ=255)
gCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTgg < 1:3242456/93‑1 (MQ=255)
gCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTgg > 2:3053540/1‑93 (MQ=255)
gCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTgg < 2:5363147/93‑1 (MQ=255)
gCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTgg < 2:1876661/93‑1 (MQ=255)
gCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTgg > 1:3701349/1‑93 (MQ=255)
cAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGga < 1:2349866/93‑1 (MQ=255)
aaCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGgaga < 2:42753/93‑1 (MQ=255)
aaCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGgaga < 1:2903720/93‑1 (MQ=255)
aCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGat > 2:3527899/1‑93 (MQ=255)
aCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGat > 1:5929440/1‑93 (MQ=255)
cAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGatta < 2:4741033/93‑1 (MQ=255)
aGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattat < 1:4251543/93‑1 (MQ=255)
gTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattatt < 2:6274121/93‑1 (MQ=255)
tctcCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGa > 2:6429216/1‑93 (MQ=255)
tctcCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGa > 1:5999197/1‑93 (MQ=255)
ctcCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGAt > 2:6543772/1‑93 (MQ=255)
ctcCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGAt > 2:4480559/1‑93 (MQ=255)
tcCTGGCACCCGGTATCTCGCGCGGTGGGTAATGGTA‑AAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGAta > 2:6236960/1‑92 (MQ=255)
ccTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATca > 2:1750838/1‑93 (MQ=255)
ccTGGCACCCGGTATCGCGCGC‑GTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaa > 1:4424252/1‑93 (MQ=255)
gCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaacaa < 2:1963986/93‑1 (MQ=255)
gCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaacaa > 1:5080314/1‑93 (MQ=255)
aCCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATa < 1:2644913/93‑1 (MQ=255)
cccGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATAc < 2:3309102/93‑1 (MQ=255)
ccGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACt > 1:2586261/1‑93 (MQ=255)
cGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTg > 1:2472038/1‑93 (MQ=255)
ggTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGc > 2:2254203/1‑93 (MQ=255)
gTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCg < 1:2542852/93‑1 (MQ=255)
gTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCg > 2:5887886/1‑93 (MQ=255)
tATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGt > 2:5671223/1‑93 (MQ=255)
aTCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTc > 2:4191722/1‑93 (MQ=255)
gcgcgcgGTGGGT‑AT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATaa < 1:5747843/93‑1 (MQ=255)
cgcgcgGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATaa < 1:1375178/93‑1 (MQ=255)
cgcgcgGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATaa < 1:4548414/93‑1 (MQ=255)
cgcgGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGa < 1:211558/93‑1 (MQ=255)
cgcgGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGa > 1:6634836/1‑93 (MQ=255)
cgcgGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGa > 1:5679092/1‑93 (MQ=255)
ggTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTGATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAt > 1:3078138/1‑93 (MQ=255)
gTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtc < 2:4519142/93‑1 (MQ=255)
tGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtct > 2:3688215/1‑93 (MQ=255)
tggTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtctc < 1:2249720/92‑1 (MQ=255)
tggTAAT‑GTTAAAAACCAGGACGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtctc < 2:770929/92‑1 (MQ=255)
gggTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtctc < 2:2882862/93‑1 (MQ=255)
ggTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATctct > 2:6045253/1‑93 (MQ=255)
gTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTa < 2:385921/93‑1 (MQ=255)
gTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTa > 1:1885193/1‑93 (MQ=255)
gTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTa > 2:117892/1‑93 (MQ=255)
gTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTa < 2:2543435/93‑1 (MQ=255)
tAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTac < 2:5989552/93‑2 (MQ=255)
tAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAt > 1:5567330/1‑93 (MQ=255)
aaT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAtt < 2:5250170/93‑1 (MQ=255)
aT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa < 1:4069911/93‑1 (MQ=255)
aT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa < 2:1944189/93‑1 (MQ=255)
aT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa < 2:2608484/93‑1 (MQ=255)
|
AGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑AAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA > NC_000913/2008384‑2008563
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGATT > NC_000913/2008390‑2008573
|
AAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAAacc < SRR4302547.1141477/94‑4 (MQ=60)
AAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAAacc < SRR4302547.5886977/94‑4 (MQ=60)
AAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAAacc > SRR4302547.2163574/1‑91 (MQ=60)
AAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA < SRR4302547.2911306/94‑1 (MQ=60)
GAAGCCTCAGAAATCGCGGCCAGTGTCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGG < SRR4302547.2968671/94‑1 (MQ=60)
GAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGG > SRR4302547.592736/1‑94 (MQ=60)
AAGCCTCAGAAATCGCGGCCTGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGG > SRR4302547.6596390/1‑94 (MQ=60)
AAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGG < SRR4302547.2717613/94‑1 (MQ=60)
AAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGG < SRR4302547.4111611/94‑1 (MQ=60)
AAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGG < SRR4302547.2188626/94‑1 (MQ=60)
AAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGGT‑AAAAacccggg > SRR4302547.4909864/1‑87 (MQ=60)
AGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGC > SRR4302547.5166672/1‑94 (MQ=60)
CCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGC < SRR4302547.3258820/94‑1 (MQ=60)
CCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGC < SRR4302547.4887232/94‑1 (MQ=60)
CTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCG > SRR4302547.5122367/1‑94 (MQ=60)
AGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCGCCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAACCCAGGGCGCGGAG < SRR4302547.673561/94‑1 (MQ=60)
AAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTT < SRR4302547.901339/94‑1 (MQ=60)
AATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTA < SRR4302547.5863109/94‑1 (MQ=60)
ATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAA < SRR4302547.6316822/94‑1 (MQ=60)
ATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGGTAA > SRR4302547.2589157/1‑94 (MQ=60)
CGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCA < SRR4302547.378629/94‑1 (MQ=60)
GGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAA > SRR4302547.5955354/1‑94 (MQ=60)
GGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGATAATTCAA > SRR4302547.5340727/1‑94 (MQ=60)
GCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAAC > SRR4302547.5614384/1‑94 (MQ=60)
GCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGGTAATTCAAC > SRR4302547.3091602/1‑94 (MQ=60)
CAGTGGCTGTGTTCCAGCAACCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCT < SRR4302547.3962950/94‑1 (MQ=60)
CAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCT > SRR4302547.6707268/1‑94 (MQ=60)
CAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCT < SRR4302547.4203542/94‑1 (MQ=60)
CAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCT < SRR4302547.6211750/94‑1 (MQ=60)
TGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTT < SRR4302547.5976705/94‑1 (MQ=60)
GGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTT < SRR4302547.5689506/94‑1 (MQ=60)
GGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTT < SRR4302547.826502/94‑1 (MQ=60)
GGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTT > SRR4302547.968363/1‑94 (MQ=60)
GGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTT < SRR4302547.1568340/94‑1 (MQ=60)
GCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTG < SRR4302547.6527559/94‑1 (MQ=60)
GCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTG > SRR4302547.79449/1‑94 (MQ=60)
GCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTG < SRR4302547.343334/94‑1 (MQ=60)
CTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGA > SRR4302547.2776017/1‑94 (MQ=60)
TGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGAT < SRR4302547.3319653/94‑1 (MQ=60)
GTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATA > SRR4302547.2454969/1‑94 (MQ=60)
TGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAA > SRR4302547.5878028/1‑94 (MQ=60)
GTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAG < SRR4302547.4605180/94‑1 (MQ=60)
GTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAG < SRR4302547.4753477/94‑1 (MQ=60)
TTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGC > SRR4302547.6170580/1‑94 (MQ=60)
CCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAGTGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCT < SRR4302547.5485808/94‑1 (MQ=60)
CAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTG > SRR4302547.1580273/1‑94 (MQ=60)
CAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTG < SRR4302547.2339889/94‑1 (MQ=60)
AGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGG < SRR4302547.3507643/94‑1 (MQ=60)
AGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGG > SRR4302547.3776898/1‑94 (MQ=60)
AGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGG < SRR4302547.1802482/94‑1 (MQ=60)
AGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGG < SRR4302547.5902237/94‑1 (MQ=60)
GCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGA < SRR4302547.3307212/94‑1 (MQ=60)
CAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAG < SRR4302547.2397487/94‑1 (MQ=60)
AAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGA > SRR4302547.1342977/1‑94 (MQ=60)
AACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGAT < SRR4302547.2141469/94‑1 (MQ=60)
AACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGAT < SRR4302547.2961625/94‑1 (MQ=60)
AACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGAT > SRR4302547.6052367/1‑94 (MQ=60)
CAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTAT < SRR4302547.2223303/94‑1 (MQ=60)
CAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTAT < SRR4302547.2603442/94‑1 (MQ=60)
AGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATT < SRR4302547.4338526/94‑1 (MQ=60)
GTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTG > SRR4302547.6096579/1‑94 (MQ=60)
TTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGA > SRR4302547.3059521/1‑94 (MQ=60)
TTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGA > SRR4302547.6123703/1‑94 (MQ=60)
CTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGCTTATTGATC > SRR4302547.2679584/1‑94 (MQ=60)
CTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATC > SRR4302547.5948015/1‑94 (MQ=60)
TCCTGGCACCCGGTATCGCGCGC‑GTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAA > SRR4302547.4515659/1‑94 (MQ=60)
CTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAAC < SRR4302547.4953709/94‑1 (MQ=60)
TGGCACCGGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACA > SRR4302547.5636183/1‑94 (MQ=60)
GGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAA > SRR4302547.5185137/1‑94 (MQ=60)
ACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATAC < SRR4302547.2698132/94‑1 (MQ=60)
CCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACT > SRR4302547.2638451/1‑94 (MQ=60)
CCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTG > SRR4302547.2522006/1‑94 (MQ=60)
CCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTG < SRR4302547.875798/94‑1 (MQ=60)
GGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCG < SRR4302547.4374105/94‑1 (MQ=60)
GGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCG > SRR4302547.3120348/1‑94 (MQ=60)
GTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGT < SRR4302547.2594215/94‑1 (MQ=60)
GCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACCATACTGCTTCATAA < SRR4302547.6669192/94‑1 (MQ=60)
GCGCGCGGTGGGT‑ATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAG < SRR4302547.5866652/94‑1 (MQ=60)
CGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAG < SRR4302547.1402750/94‑1 (MQ=60)
CGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAG < SRR4302547.4642483/94‑1 (MQ=60)
GCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGA > SRR4302547.5796353/1‑94 (MQ=60)
GCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGA > SRR4302547.6772944/1‑94 (MQ=60)
CGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAA < SRR4302547.215544/94‑1 (MQ=60)
CGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTGATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAT > SRR4302547.3139271/1‑94 (MQ=60)
TGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCT < SRR4302547.2295139/94‑1 (MQ=60)
GGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTA < SRR4302547.2726667/94‑1 (MQ=60)
GGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTA > SRR4302547.1922437/1‑94 (MQ=60)
GGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTA > SRR4302547.6216542/1‑94 (MQ=60)
GTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAT > SRR4302547.5682133/1‑94 (MQ=60)
GTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAT > SRR4302547.5579536/1‑94 (MQ=60)
AATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA < SRR4302547.2707290/94‑1 (MQ=60)
ATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAG > SRR4302547.105908/1‑94 (MQ=60)
ATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAG < SRR4302547.4152584/94‑1 (MQ=60)
ATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAG > SRR4302547.3357494/1‑94 (MQ=60)
GTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGAC < SRR4302547.4852212/94‑1 (MQ=60)
ttaAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACA < SRR4302547.5256693/91‑1 (MQ=60)
A‑AAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAA < SRR4302547.6389150/94‑1 (MQ=60)
A‑AAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAA > SRR4302547.5422261/1‑94 (MQ=60)
A‑AAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAA < SRR4302547.4178977/94‑1 (MQ=60)
AAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAG > SRR4302547.3841915/1‑94 (MQ=60)
AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGAT > SRR4302547.1992273/1‑94 (MQ=60)
AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGAT < SRR4302547.1170926/94‑1 (MQ=60)
AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGAT < SRR4302547.3174982/94‑1 (MQ=60)
A‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGATT > SRR4302547.6162179/1‑94 (MQ=60)
A‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGATT > SRR4302547.5566662/1‑94 (MQ=60)
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AAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGATT > NC_000913/2008390‑2008573
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
