Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,115,417 |
T→C |
H337R (CAC→CGC) |
wcaK ← |
putative galactokinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,115,417 | 0 | T | C | 85.0%
| 596.4
/ 85.9
| 233 | H337R (CAC→CGC) | wcaK | putative galactokinase |
| Reads supporting (aligned to +/- strand): ref base T (16/19); new base C (106/92); total (122/111) |
| Fisher's exact test for biased strand distribution p-value = 4.64e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 |
Only 100 of 238 total aligned reads displayed.
GTAGTCCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAACGGGCA > NC_000913/2115325‑2115509
|
gTAGTCCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGt > 1:2036761/1‑93 (MQ=255)
tCCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAg < 2:5014048/93‑1 (MQ=255)
tCCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAg < 1:4814630/93‑1 (MQ=255)
cgcAGCTGCTGCATAATCCCGGGGGATTGATGTTCGTAGTTGATGGAAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAgg < 2:4624756/91‑1 (MQ=255)
cccAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAgg > 2:6554136/1‑93 (MQ=255)
cccAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAgg < 1:1329986/93‑1 (MQ=255)
cccAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAgg > 2:4300678/1‑93 (MQ=255)
cccAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAgg > 2:278412/1‑93 (MQ=255)
cccAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAAGTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAgg < 1:6136414/93‑1 (MQ=255)
gctgctGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGcgcg < 2:229367/93‑1 (MQ=255)
ctgctgCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGt > 2:4864991/1‑93 (MQ=255)
tgctgcATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTa > 1:3750974/1‑93 (MQ=255)
tgctgcATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTa > 2:1389294/1‑93 (MQ=255)
tgctgcATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTa < 2:508903/93‑1 (MQ=255)
gctgcATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTAc < 1:1522568/93‑1 (MQ=255)
ctgcATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTAcc < 2:4976607/93‑1 (MQ=255)
ctgcATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTAcc < 2:2169313/93‑1 (MQ=255)
gcATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGa < 2:2269196/93‑1 (MQ=255)
cATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGAc < 1:2085819/93‑1 (MQ=255)
tAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACgg > 1:2882273/1‑93 (MQ=255)
aTCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTg < 2:6494567/93‑1 (MQ=255)
aTCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGAGCAGGCGCGTACCGACggcg > 1:356390/1‑91 (MQ=255)
tCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGa < 2:4931738/93‑1 (MQ=255)
cccGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAg < 1:5376566/93‑1 (MQ=255)
cccGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAg < 2:3198155/93‑1 (MQ=255)
ccGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGt < 1:4868619/93‑1 (MQ=255)
ggcggATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTc > 2:3297093/1‑93 (MQ=255)
ggcggATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTc > 1:1068952/1‑93 (MQ=255)
gcggATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTca > 2:1572206/1‑93 (MQ=255)
gcggATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTca < 1:6045717/93‑1 (MQ=255)
gcggATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTca > 2:2870032/1‑93 (MQ=255)
gcggATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTca > 1:3309035/1‑93 (MQ=255)
cggATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTcac > 2:5985177/1‑93 (MQ=255)
cggATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTcac > 1:2193612/1‑93 (MQ=255)
ggATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGGGAGTTcaca > 2:2370950/1‑93 (MQ=255)
gATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAg > 2:5163884/1‑93 (MQ=255)
gATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAg < 2:4379637/93‑1 (MQ=255)
aTTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAgg > 2:4236806/1‑93 (MQ=255)
aTTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAgg > 2:6395820/1‑93 (MQ=255)
tttATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGc > 1:2437716/1‑93 (MQ=255)
ttATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGcc > 2:1116274/1‑93 (MQ=255)
aTGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGcccc > 1:958638/1‑93 (MQ=255)
aTGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGcccc < 1:4948180/93‑1 (MQ=255)
tGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGccccc < 1:2755788/93‑1 (MQ=255)
cGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGaa < 1:5489940/93‑1 (MQ=255)
cGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGaa < 2:102802/93‑1 (MQ=255)
tAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAAtt > 2:5447469/1‑93 (MQ=255)
tAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAAtt > 1:2480198/1‑93 (MQ=255)
gTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAAtttt > 2:388133/1‑93 (MQ=255)
ttGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGTATTTTg > 1:5878672/1‑93 (MQ=255)
tGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGc > 1:2401683/1‑93 (MQ=255)
tGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTTAGTTCACAGGCCCCCAGAATTTTGCCCa > 2:4136599/1‑93 (MQ=255)
tGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCa < 2:2100210/93‑1 (MQ=255)
ggCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCAt > 1:353849/1‑93 (MQ=255)
cAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCAttt < 1:5244975/93‑1 (MQ=255)
aaTTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTc > 2:3447415/1‑93 (MQ=255)
aTTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTcc < 2:1526732/93‑1 (MQ=255)
ttGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCa < 1:465561/93‑1 (MQ=255)
ggAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCg > 2:3763640/1‑93 (MQ=255)
ggAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCg > 1:4257115/1‑93 (MQ=255)
gAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGt > 2:2601754/1‑93 (MQ=255)
aGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGtt < 2:6241050/93‑1 (MQ=255)
aGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGtt < 2:197454/93‑1 (MQ=255)
aGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGtt > 1:2980214/1‑93 (MQ=255)
aGTGACAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGtt < 1:1696184/93‑1 (MQ=255)
gTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTg > 1:5681196/1‑93 (MQ=255)
gTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTg > 2:473665/1‑93 (MQ=255)
gTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTg < 1:4222491/93‑1 (MQ=255)
tGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGa < 1:3104009/93‑1 (MQ=255)
tGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGa < 2:2511492/93‑1 (MQ=255)
ggCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAg < 1:6437237/93‑1 (MQ=255)
gCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGt < 2:547500/93‑1 (MQ=255)
cAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGtt < 2:3637732/93‑1 (MQ=255)
aaaaTTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTc > 1:885094/1‑93 (MQ=255)
aaaaTTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTc > 2:3039153/1‑93 (MQ=255)
aaaTTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTca > 1:4852978/1‑93 (MQ=255)
aaTTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTcat < 2:644747/93‑1 (MQ=255)
aTTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGGGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTcatc > 1:1457633/1‑93 (MQ=255)
ttCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTcatcc > 1:4202485/1‑93 (MQ=255)
ttCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTcatcc < 2:5420506/93‑1 (MQ=255)
tCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTcatcca > 1:6365631/1‑93 (MQ=255)
tCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCa < 1:5525629/93‑1 (MQ=255)
tCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCa > 2:2443627/1‑93 (MQ=255)
cGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCAc > 2:880993/1‑93 (MQ=255)
cGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCAc < 1:4022975/93‑1 (MQ=255)
gagaTAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACt > 2:465274/1‑93 (MQ=255)
agaTAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTa > 2:1367912/1‑93 (MQ=255)
agaTAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTa < 1:2291636/93‑1 (MQ=255)
aTAATGGCAGAGTGCAGTCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACg < 2:692259/93‑1 (MQ=255)
aTAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACg < 1:924726/93‑1 (MQ=255)
aTAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACg < 1:6312535/93‑1 (MQ=255)
tGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGt < 2:5028015/93‑1 (MQ=255)
tGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGt > 1:3637583/1‑93 (MQ=255)
ggCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTa > 1:1756652/1‑93 (MQ=255)
gCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTaa > 1:5863775/1‑93 (MQ=255)
cAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCTCATTTCCAGATCGCTGAGTTCATCCATCACTACGTGGTAAc > 2:5768135/1‑93 (MQ=255)
agagCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAACg > 2:1809268/1‑93 (MQ=255)
agagCGCAGGCGCGTACCGACGGTGAGTTCAAAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACATGGTAACg > 1:2350335/1‑93 (MQ=255)
agagCGCAGGCGCGTACCGACGGTGAGATCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGGTGAGTTCATCCATCACTACGTGATAACg > 1:5131799/1‑93 (MQ=255)
gagCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAACgg > 2:5747/1‑93 (MQ=255)
|
GTAGTCCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAACGGGCA > NC_000913/2115325‑2115509
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTAGTCCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAACGGGCAG > NC_000913/2115324‑2115510
|
GGTAGTCCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGT > SRR4302547.2077358/1‑94 (MQ=60)
GGTAGTCCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGC < SRR4302547.620217/94‑1 (MQ=60)
GGTAGTCCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGC < SRR4302547.1993675/94‑1 (MQ=60)
GGTAGTCCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGC > SRR4302547.732929/1‑94 (MQ=60)
GTAGTCCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCG > SRR4302547.759910/1‑94 (MQ=60)
TAGTCCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGC < SRR4302547.5897504/94‑1 (MQ=60)
AGTCCCAGCTGCTGTATAATCCCGGCGGATTTATGTTCGTAGGTGATGGCAATTGCCGGAGTAGCATACTTCCTCTAGATAATGGCCGAGTGCA > SRR4302547.3331898/1‑94 (MQ=60)
AGTCCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCA < SRR4302547.494989/94‑1 (MQ=60)
TCCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGG < SRR4302547.4914412/94‑1 (MQ=60)
CCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGC < SRR4302547.4298751/94‑1 (MQ=60)
CCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGC < SRR4302547.1356720/94‑1 (MQ=60)
CCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAAGTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGC < SRR4302547.6263707/94‑1 (MQ=60)
CAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGC < SRR4302547.2142721/94‑1 (MQ=60)
AGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCG > SRR4302547.4915150/1‑94 (MQ=60)
CTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTA > SRR4302547.3827528/1‑94 (MQ=60)
CTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTA < SRR4302547.1549506/94‑1 (MQ=60)
TGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTAC > SRR4302547.2340254/1‑94 (MQ=60)
GCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACC < SRR4302547.2434333/94‑1 (MQ=60)
GCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACC < SRR4302547.1552880/94‑1 (MQ=60)
CTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCG < SRR4302547.2207310/94‑1 (MQ=60)
CTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCG > SRR4302547.5997529/1‑94 (MQ=60)
CTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCG > SRR4302547.6485817/1‑94 (MQ=60)
CTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCG < SRR4302547.2417854/94‑1 (MQ=60)
TGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGA < SRR4302547.5170170/94‑1 (MQ=60)
TGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGA > SRR4302547.983856/1‑94 (MQ=60)
GCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGAC < SRR4302547.1424594/94‑1 (MQ=60)
CATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACG < SRR4302547.1098143/94‑1 (MQ=60)
CATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACG < SRR4302547.2127417/94‑1 (MQ=60)
ATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGG < SRR4302547.647505/94‑1 (MQ=60)
ATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGG > SRR4302547.2939798/1‑94 (MQ=60)
TAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGT < SRR4302547.6723562/94‑1 (MQ=60)
AATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTG > SRR4302547.1846604/1‑94 (MQ=60)
AATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTG > SRR4302547.3633331/1‑94 (MQ=60)
AATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTG < SRR4302547.4975368/94‑1 (MQ=60)
AATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGAGCAGGCGCGTACCGACGGCG > SRR4302547.362998/1‑94 (MQ=60)
TCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAG < SRR4302547.6561072/94‑1 (MQ=60)
CCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGT < SRR4302547.5487545/94‑1 (MQ=60)
CCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTT < SRR4302547.4969514/94‑1 (MQ=60)
CGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTC > SRR4302547.1090237/1‑94 (MQ=60)
GGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCA > SRR4302547.3375755/1‑94 (MQ=60)
GCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCAC < SRR4302547.6171157/94‑1 (MQ=60)
GCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCAC > SRR4302547.2237657/1‑94 (MQ=60)
CGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACA < SRR4302547.6329612/94‑1 (MQ=60)
ATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGC > SRR4302547.2487012/1‑94 (MQ=60)
TTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCC > SRR4302547.4764683/1‑94 (MQ=60)
TTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCC < SRR4302547.3121223/94‑1 (MQ=60)
TATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCC > SRR4302547.977259/1‑94 (MQ=60)
TATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCC > SRR4302547.2619318/1‑94 (MQ=60)
ATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCC < SRR4302547.5050649/94‑1 (MQ=60)
TGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCA > SRR4302547.4402395/1‑94 (MQ=60)
TGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCA < SRR4302547.279481/94‑1 (MQ=60)
TGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCA < SRR4302547.2811032/94‑1 (MQ=60)
GTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAG < SRR4302547.3831591/94‑1 (MQ=60)
GTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTATCGACGGTGAGTTCACAGGCCCCCAG > SRR4302547.5127167/1‑94 (MQ=60)
GTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAG < SRR4302547.430412/94‑1 (MQ=60)
TTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGA > SRR4302547.5597790/1‑94 (MQ=60)
CGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAAT < SRR4302547.5603306/94‑1 (MQ=60)
GTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATT > SRR4302547.2530327/1‑94 (MQ=60)
AGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTT > SRR4302547.2482365/1‑94 (MQ=60)
GTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGTATTTTG > SRR4302547.6000381/1‑94 (MQ=60)
TTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGC > SRR4302547.1628385/1‑94 (MQ=60)
TTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGC > SRR4302547.2450325/1‑94 (MQ=60)
GATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCC < SRR4302547.6013279/94‑1 (MQ=60)
ATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCA < SRR4302547.3533778/94‑1 (MQ=60)
TGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCAT > SRR4302547.360415/1‑94 (MQ=60)
CAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTC < SRR4302547.5352931/94‑1 (MQ=60)
ATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCA > SRR4302547.6159704/1‑94 (MQ=60)
TTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAG < SRR4302547.474141/94‑1 (MQ=60)
GCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGAT > SRR4302547.876620/1‑94 (MQ=60)
CCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCGCATCTCCAGATC > SRR4302547.2942550/1‑94 (MQ=60)
CCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATC < SRR4302547.3604755/94‑1 (MQ=60)
CGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCG > SRR4302547.984612/1‑94 (MQ=60)
CGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCG > SRR4302547.4344228/1‑94 (MQ=60)
CGGAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCG > SRR4302547.3800369/1‑94 (MQ=60)
GAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTT < SRR4302547.2086105/94‑1 (MQ=60)
GAGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTT > SRR4302547.3039515/1‑94 (MQ=60)
AGTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTG > SRR4302547.5798499/1‑94 (MQ=60)
AGTGACAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTG < SRR4302547.1729534/94‑1 (MQ=60)
GTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGA < SRR4302547.4308733/94‑1 (MQ=60)
GTGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGA < SRR4302547.250262/94‑1 (MQ=60)
TGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAG > SRR4302547.934687/1‑94 (MQ=60)
TGGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAG < SRR4302547.3165527/94‑1 (MQ=60)
GGCAAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGT < SRR4302547.6571397/94‑1 (MQ=60)
CAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTC > SRR4302547.902099/1‑94 (MQ=60)
AAAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCA > SRR4302547.4953530/1‑94 (MQ=60)
AAATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCAT < SRR4302547.5880865/94‑1 (MQ=60)
AATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATC > SRR4302547.4234100/1‑94 (MQ=60)
AATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGGGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATC > SRR4302547.1486761/1‑94 (MQ=60)
ATTCATCGAGATAATGGCAGAGCGCAGGCGCTTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCC < SRR4302547.3306475/94‑1 (MQ=60)
ATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCC > SRR4302547.5247258/1‑94 (MQ=60)
ATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCC > SRR4302547.4288213/1‑94 (MQ=60)
ATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCC < SRR4302547.4919739/94‑1 (MQ=60)
ATTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCC < SRR4302547.1508044/94‑1 (MQ=60)
TTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCA > SRR4302547.1825490/1‑94 (MQ=60)
TTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCA > SRR4302547.6498430/1‑94 (MQ=60)
TTCATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCA < SRR4302547.4538816/94‑1 (MQ=60)
ATCGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCA < SRR4302547.2268583/94‑1 (MQ=60)
TCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCAC < SRR4302547.5639664/94‑1 (MQ=60)
CGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACT < SRR4302547.4104714/94‑1 (MQ=60)
CGAGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCACCAGAATTTTGCCCATTGCCAAATCGTTGAGTTAATCCAACACT < SRR4302547.4338965/94‑1 (MQ=60)
AGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTAC > SRR4302547.5774100/1‑94 (MQ=60)
AGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTAC < SRR4302547.1759491/94‑1 (MQ=60)
AGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTAC < SRR4302547.5507643/94‑1 (MQ=60)
AGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTAC > SRR4302547.5355439/1‑94 (MQ=60)
AGATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTAC < SRR4302547.2338058/94‑1 (MQ=60)
GATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACG > SRR4302547.4185833/1‑94 (MQ=60)
GATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACG < SRR4302547.3015770/94‑1 (MQ=60)
ATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGT < SRR4302547.942588/94‑1 (MQ=60)
ATAATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGT < SRR4302547.6443789/94‑1 (MQ=60)
AATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGG < SRR4302547.5713544/94‑1 (MQ=60)
AATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGG > SRR4302547.3772259/1‑94 (MQ=60)
ATGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGT > SRR4302547.3711767/1‑94 (MQ=60)
TGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTA > SRR4302547.975200/1‑94 (MQ=60)
TGGCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTA > SRR4302547.1791434/1‑94 (MQ=60)
GGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAA > SRR4302547.5985129/1‑94 (MQ=60)
GCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGTCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAAC < SRR4302547.2867950/94‑1 (MQ=60)
GCAGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAAC > SRR4302547.6208750/1‑94 (MQ=60)
CAGAGCGCAGGCGCGTACCGACGGTGAGTTCAAAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACATGGTAACG > SRR4302547.2397965/1‑94 (MQ=60)
CAGAGCGCAGGCGCGTACCGACGGTGAGATCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGGTGAGTTCATCCATCACTACGTGATAACG > SRR4302547.5237532/1‑94 (MQ=60)
AGAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGCGGTAACGG > SRR4302547.5609860/1‑94 (MQ=60)
GAGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAACGGG > SRR4302547.3937058/1‑94 (MQ=60)
AGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAACGGGC > SRR4302547.1435710/1‑94 (MQ=60)
AGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAACGGGC > SRR4302547.6682375/1‑94 (MQ=60)
AGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAACGGGC < SRR4302547.2354194/94‑1 (MQ=60)
AGCGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAACGGGC < SRR4302547.4741573/94‑1 (MQ=60)
TGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAACGGGCAG < SRR4302547.3668748/94‑1 (MQ=60)
CGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAACGGGCAG < SRR4302547.1562691/94‑1 (MQ=60)
CGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAACGGGCAG > SRR4302547.628387/1‑94 (MQ=60)
CGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAACGGGCAG < SRR4302547.3569326/94‑1 (MQ=60)
|
GGTAGTCCCAGCTGCTGCATAATCCCGGCGGATTTATGTTCGTAGTTGATGGCAATTGCCGGAGTGGCAAAATTCATCGAGATAATGGCAGAGTGCAGGCGCGTACCGACGGTGAGTTCACAGGCCCCCAGAATTTTGCCCATTTCCAGATCGTTGAGTTCATCCATCACTACGTGGTAACGGGCAG > NC_000913/2115324‑2115510
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
