Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,118,886 |
T→C |
T231A (ACC→GCC) |
wcaJ ← |
putative colanic acid biosynthsis UDP‑glucose lipid carrier transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,118,886 | 0 | T | C | 100.0%
| 567.9
/ NA
| 160 | T231A (ACC→GCC) | wcaJ | putative colanic acid biosynthsis UDP‑glucose lipid carrier transferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (82/78); total (82/78) |
Only 100 of 177 total aligned reads displayed.
GCGGCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGTGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCTTT > NC_000913/2118796‑2118976
|
gCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGgtgt > 1:5742380/1‑93 (MQ=255)
caccacCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTc < 1:3927913/93‑1 (MQ=255)
ccaccGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCATCAGCCCCGAACAGGCGGTGGCCg > 1:4485924/1‑93 (MQ=255)
ccaccGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCg > 2:5768330/1‑93 (MQ=255)
accGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGcc > 1:3252632/1‑93 (MQ=255)
ccGGTGCGCCGTGCATCTGTTCGAGGCGTGACTGGACAATGTTGAAGGTAAAGACGGCGGAGATCAGCAGCACCGAACAGGCGGTGTCCGCCa < 1:125802/93‑1 (MQ=255)
ccGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGCCGGGGGTCAGCAGCACCGAACAGACGGGGTCCGCCa > 1:4549585/1‑93 (MQ=255)
cGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAg < 2:2721768/93‑1 (MQ=255)
ggTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGt < 2:1707918/93‑1 (MQ=255)
ggTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGt < 2:3291705/93‑1 (MQ=255)
ggTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGt < 2:3133557/93‑1 (MQ=255)
aCGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGa < 1:4432080/93‑1 (MQ=255)
aCGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGa > 2:5066610/1‑93 (MQ=255)
cGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGAt < 2:5719854/93‑1 (MQ=255)
ccGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATgg < 1:3423810/93‑1 (MQ=255)
gTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGAc > 2:452524/1‑93 (MQ=255)
ttCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGAcc > 1:1372627/1‑93 (MQ=255)
ttCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGAcc > 1:64852/1‑93 (MQ=255)
tCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCa < 1:2326865/93‑1 (MQ=255)
tCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCa > 1:1772417/1‑93 (MQ=255)
tCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCa < 2:3987783/93‑1 (MQ=255)
tctcTTCGAGGCGTGAATGGAGAATGTTGAAGGTAACGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGCCCAGtt > 1:4302607/1‑93 (MQ=255)
tctcTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGtt > 1:4246607/1‑93 (MQ=255)
tctcTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGtt > 1:234968/1‑93 (MQ=255)
ctctTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGttt < 1:945825/93‑1 (MQ=255)
tctTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGtttt > 1:3029969/1‑93 (MQ=255)
cGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCa < 2:6085897/93‑1 (MQ=255)
cGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCa < 1:5780303/93‑1 (MQ=255)
cGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCCCCAGTTGGTGCACGTGTTTTTTct > 1:1241659/1‑92 (MQ=255)
gAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCAc > 1:2237010/1‑93 (MQ=255)
gAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCAc < 1:1546865/93‑1 (MQ=255)
ggCGTGAATGGAGAATGTTGAGGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTc < 2:4428563/93‑1 (MQ=255)
ggCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTc > 2:5159702/1‑93 (MQ=255)
cGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTcgc < 1:3274358/93‑1 (MQ=255)
gTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTcgcg > 2:548505/1‑93 (MQ=255)
gTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTcgcg < 1:105929/93‑1 (MQ=255)
tGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTcgcgc > 1:2835594/1‑93 (MQ=255)
gAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTcgcgcg > 1:5053939/1‑93 (MQ=255)
aaTGGAGAATGTTGCAGGTAAAGACGTCGGGGATCAGCAGCACGGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCGCTCgggcgc > 2:758982/1‑93 (MQ=255)
aTGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGcc > 2:3656056/1‑93 (MQ=255)
tGGAGAATGTTGAAGGTAAAGACGTCGGGGGTCAGCAGGACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTGTTTTCAGTCGTGCGCCg > 2:1370472/1‑93 (MQ=255)
tGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCg > 1:4688751/1‑93 (MQ=255)
gagaATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTc < 1:4931080/93‑1 (MQ=255)
gagaATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGGGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTc > 2:4905886/1‑93 (MQ=255)
gaATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCga > 1:1891602/1‑92 (MQ=255)
gaATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGc > 1:5242880/1‑93 (MQ=255)
aaTGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGca > 2:2774965/1‑93 (MQ=255)
aaTGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGca > 2:926063/1‑93 (MQ=255)
aTGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGcac > 1:5649734/1‑93 (MQ=255)
tGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTGCGCCAGTTGATGGACCAGTTTTTTGAATCGCGCGCCGTCGcact > 1:2720435/1‑92 (MQ=255)
tGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGcaca < 2:2072377/93‑1 (MQ=255)
gTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACAt < 2:5515244/93‑1 (MQ=255)
gTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACAt > 2:4320327/1‑93 (MQ=255)
gTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACAt > 2:3468447/1‑93 (MQ=255)
ttGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACAtt < 1:915478/93‑1 (MQ=255)
tGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACAttt < 1:3112932/93‑1 (MQ=255)
aaGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGc > 1:3290150/1‑93 (MQ=255)
atgTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCa < 1:3754138/91‑1 (MQ=255)
aGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCa > 2:4776939/1‑93 (MQ=255)
aGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCa > 2:3967580/1‑93 (MQ=255)
gTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATc > 2:4133351/1‑93 (MQ=255)
tAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATcg > 2:2965757/1‑93 (MQ=255)
aaGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATcgcg > 2:2844055/1‑93 (MQ=255)
aGACGTCCGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGa < 2:3746810/93‑1 (MQ=255)
gACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGat > 1:3674102/1‑93 (MQ=255)
aCGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGata < 2:2901220/93‑1 (MQ=255)
aCGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGata < 1:2053387/93‑1 (MQ=255)
aCGCCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGata < 1:5942117/93‑1 (MQ=255)
gTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGAtata < 2:3008339/93‑1 (MQ=255)
gTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGAtata < 2:5847000/93‑1 (MQ=255)
gTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGAtata > 1:3439347/1‑93 (MQ=255)
tCGGGGATCAGCAGCACCGAACAGGCGGGGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAg > 2:1845215/1‑93 (MQ=255)
cGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGa < 2:1575082/93‑1 (MQ=255)
cGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGa < 2:4362215/93‑1 (MQ=255)
ggggATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGAc > 2:1368748/1‑93 (MQ=255)
ggATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGt < 2:3202201/93‑1 (MQ=255)
tCAGCGGCACCGACCGAACGGTGTCCGCCAGTTGATGGCCCAGTTTTTTCACTCGCGCGCCGTCGCCCATTTGCATCGCGATTTAGACGttgt < 2:5496853/93‑3 (MQ=255)
tCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTAt < 1:113142/93‑1 (MQ=255)
tCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTAt > 1:776564/1‑93 (MQ=255)
cagcagCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATg > 1:5376737/1‑93 (MQ=255)
agcagcACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCCCTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGa < 1:252656/93‑1 (MQ=255)
agcagcACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGa > 2:5816485/1‑93 (MQ=255)
gcagcaCCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGaa < 2:3049244/93‑1 (MQ=255)
gcagcaCCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGaa > 2:4917383/1‑93 (MQ=255)
agcaCCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATc < 2:1179101/93‑1 (MQ=255)
gcaCCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCt < 1:708474/93‑1 (MQ=255)
gcaCCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCt < 2:2210632/93‑1 (MQ=255)
gcaCCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCt > 2:4746986/1‑93 (MQ=255)
aCCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTg > 1:107543/1‑93 (MQ=255)
ccGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGc < 1:236980/93‑1 (MQ=255)
cGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGcc > 1:4030749/1‑93 (MQ=255)
cGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGcc < 1:1154060/93‑1 (MQ=255)
gAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGccc > 1:2195061/1‑93 (MQ=255)
aaCAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCg > 2:3763021/1‑93 (MQ=255)
aCAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGc > 2:4375107/1‑93 (MQ=255)
aCAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGc > 1:5566504/1‑93 (MQ=255)
cAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCt < 2:3225744/93‑1 (MQ=255)
aGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCCCTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCtt < 2:363646/93‑1 (MQ=255)
aGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCtt < 2:1887457/93‑1 (MQ=255)
ggtggtGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCttt < 1:4159177/93‑1 (MQ=255)
|
GCGGCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGTGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCTTT > NC_000913/2118796‑2118976
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAAGCGGCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGTGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCTTTCG > NC_000913/2118793‑2118978
|
AAAGCGGCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGC < SRR4302532.2108172/94‑1 (MQ=60)
AGCGGCACCACCGGTACGCCGGTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGG < SRR4302532.3509788/94‑1 (MQ=60)
GCGGCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGT < SRR4302532.1963113/94‑1 (MQ=60)
CGGCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTG < SRR4302532.454217/94‑1 (MQ=60)
GGCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGT > SRR4302532.5942291/1‑94 (MQ=60)
GGCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGT > SRR4302532.3904133/1‑94 (MQ=60)
CACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCC < SRR4302532.4060257/94‑1 (MQ=60)
ACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCATCAGCCCCGAACAGGCGGTGGCCG > SRR4302532.4639026/1‑94 (MQ=60)
CACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCC > SRR4302532.3360684/1‑94 (MQ=60)
ACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGCCGGGGGTCAGCAGCACCGAACAGACGGGGTCCGCCA > SRR4302532.4704838/1‑94 (MQ=60)
CCGGTGCGCCGTGCATCTGTTCGAGGCGTGACTGGACAATGTTGAAGGTAAAGACGGCGGAGATCAGCAGCACCGAACAGGCGGTGTCCGCCAG < SRR4302532.130062/94‑1 (MQ=60)
CCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAG < SRR4302532.2209985/94‑1 (MQ=60)
GGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTT < SRR4302532.1661378/94‑1 (MQ=60)
ggactcggttccTCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGACCAGGCGGTGTCCGCCAGTTG < SRR4302532.4508088/82‑1 (MQ=60)
TACGCCGTTCATCTCTTCGAGGCGTGAATGGCGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACCGGCAGTGTCAGCCAGTTGA > SRR4302532.2180648/1‑94 (MQ=60)
ACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGAT < SRR4302532.4583088/94‑1 (MQ=60)
GCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGG > SRR4302532.4965545/1‑94 (MQ=60)
CCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGA < SRR4302532.3538511/94‑1 (MQ=60)
CCGTGCATCTCTTCGAGGCGTGAATGGAGAATGTTGAGGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGA < SRR4302532.3538512/94‑1 (MQ=60)
GTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACC > SRR4302532.3728744/1‑94 (MQ=60)
GTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACC > SRR4302532.67174/1‑94 (MQ=60)
GTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACC < SRR4302532.4224517/94‑1 (MQ=60)
GTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACC > SRR4302532.1418614/1‑94 (MQ=60)
TTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCA > SRR4302532.1831785/1‑94 (MQ=60)
TCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAG < SRR4302532.2404339/94‑1 (MQ=60)
TCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAG > SRR4302532.1195965/1‑94 (MQ=60)
CATCTCTTTGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGT > SRR4302532.2383062/1‑94 (MQ=60)
CATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGT > SRR4302532.2479819/1‑94 (MQ=60)
CTCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTT < SRR4302532.3261812/94‑1 (MQ=60)
ATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAACGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGCCCAGTT > SRR4302532.4448055/1‑94 (MQ=60)
ATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTT > SRR4302532.4389288/1‑94 (MQ=60)
ATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTT > SRR4302532.243019/1‑94 (MQ=60)
CTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTT < SRR4302532.978203/94‑1 (MQ=60)
CTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTT > SRR4302532.3129969/1‑94 (MQ=60)
TTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTC < SRR4302532.3385280/94‑1 (MQ=60)
TCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCCCCAGTTGgtgcacgtgttttttct > SRR4302532.1283206/1‑77 (MQ=60)
CGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCAC < SRR4302532.5981361/94‑1 (MQ=60)
CGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCAC > SRR4302532.2311235/1‑94 (MQ=60)
gaagcgtgggTGGAGAATGTTGAAGGTAAAGACGTCGGGGAACAGCAGCACCGAAAAGGCGGTGTCCACCAGTTGATGGACCAGTTTTTTCACT < SRR4302532.5689896/84‑1 (MQ=60)
GAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACT < SRR4302532.1599132/94‑1 (MQ=60)
AGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTC < SRR4302532.3486049/94‑1 (MQ=60)
GGCGTGAAAGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCCCCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCG < SRR4302532.15777/94‑1 (MQ=60)
GGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGAGCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCG < SRR4302532.914474/94‑1 (MQ=60)
CGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCG < SRR4302532.3383241/94‑1 (MQ=60)
GTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGC > SRR4302532.2930391/1‑94 (MQ=60)
GTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGC < SRR4302532.109585/94‑1 (MQ=60)
GTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGC > SRR4302532.6080431/1‑94 (MQ=60)
TGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCG > SRR4302532.5227394/1‑94 (MQ=60)
GAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGC < SRR4302532.72032/94‑1 (MQ=60)
AATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCC < SRR4302532.1343252/94‑1 (MQ=60)
ATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCG > SRR4302532.5401640/1‑94 (MQ=60)
ATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCG > SRR4302532.4848672/1‑94 (MQ=60)
GAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCG < SRR4302532.5100400/94‑1 (MQ=60)
AGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGC > SRR4302532.3074931/1‑94 (MQ=60)
AGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGC > SRR4302532.5423623/1‑94 (MQ=60)
AGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGA > SRR4302532.1954323/1‑94 (MQ=60)
AATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCAC > SRR4302532.5846310/1‑94 (MQ=60)
ATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTGCGCCAGTTGATGGACCAGTTTTTTGAATCGCGCGCCGTCGCACT > SRR4302532.2811927/1‑94 (MQ=60)
ATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGATGATGGACCAGTTTTTTCACTCGCGCGCGGCCGCACA > SRR4302532.2811926/1‑94 (MQ=60)
GTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATT > SRR4302532.2439767/1‑94 (MQ=60)
TTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTT < SRR4302532.946800/94‑1 (MQ=60)
GTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTT < SRR4302532.4729289/94‑1 (MQ=60)
TGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTG < SRR4302532.3216210/94‑1 (MQ=60)
GAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGC > SRR4302532.3399605/1‑94 (MQ=60)
ATGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCAT < SRR4302532.3880396/94‑1 (MQ=60)
AGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCAT < SRR4302532.5775527/94‑1 (MQ=60)
AGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCAT < SRR4302532.2292430/94‑1 (MQ=60)
GTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCG < SRR4302532.5901588/94‑1 (MQ=60)
GTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCG < SRR4302532.4585995/94‑1 (MQ=60)
AAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCG > SRR4302532.86539/1‑94 (MQ=60)
AGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGAT > SRR4302532.3797517/1‑94 (MQ=60)
ACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATAT < SRR4302532.2121771/94‑1 (MQ=60)
ACGCCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATAT < SRR4302532.6147728/94‑1 (MQ=60)
CGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATA > SRR4302532.3554585/1‑94 (MQ=60)
ATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTAT > SRR4302532.1184198/1‑94 (MQ=60)
ATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTAT > SRR4302532.803300/1‑94 (MQ=60)
TCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATG < SRR4302532.117028/94‑1 (MQ=60)
TCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATG > SRR4302532.5562990/1‑94 (MQ=60)
CAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGA > SRR4302532.1545377/1‑94 (MQ=60)
AGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCCCTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAA < SRR4302532.261439/94‑1 (MQ=60)
AGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGGTTTTTCACTCGCGCGCCGTCGCACCTTTGCATCGCGATATAGACGGTATGAATCT > SRR4302532.947854/1‑94 (MQ=60)
GCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTT < SRR4302532.3198016/94‑1 (MQ=60)
GCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTT < SRR4302532.732677/94‑1 (MQ=60)
catgGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTG < SRR4302532.4433117/90‑1 (MQ=60)
CACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTG > SRR4302532.111252/1‑94 (MQ=60)
CACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTG > SRR4302532.2738780/1‑94 (MQ=60)
CACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTG < SRR4302532.5119185/94‑1 (MQ=60)
CACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTG > SRR4302532.111253/1‑94 (MQ=60)
CCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCC > SRR4302532.4166559/1‑94 (MQ=60)
CCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCC > SRR4302532.4105676/1‑94 (MQ=60)
CCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCC < SRR4302532.245132/94‑1 (MQ=60)
CGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCC > SRR4302532.2268183/1‑94 (MQ=60)
CGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCC < SRR4302532.1192565/94‑1 (MQ=60)
AACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGC > SRR4302532.5759802/1‑94 (MQ=60)
GGTGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCTTTC < SRR4302532.4298676/94‑1 (MQ=60)
GCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCTTTCT < SRR4302532.6283861/94‑1 (MQ=60)
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AAAGCGGCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGTGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCTTTCG > NC_000913/2118793‑2118978
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
