Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,243,793 |
T→C |
T333A (ACG→GCG) |
cirA ← |
CirA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,243,793 | 0 | T | C | 86.9%
| 671.1
/ 83.2
| 252 | T333A (ACG→GCG) | cirA | CirA |
| Reads supporting (aligned to +/- strand): ref base T (18/15); new base C (102/117); total (120/132) |
| Fisher's exact test for biased strand distribution p-value = 4.56e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.55e-01 |
Only 100 of 259 total aligned reads displayed.
CGTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAGGGTTT > NC_000913/2243703‑2243884
|
cgTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGTga < 1:4030205/93‑1 (MQ=255)
cgTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCga < 1:4076090/93‑1 (MQ=255)
cgTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCga < 1:50609/93‑1 (MQ=255)
cgTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCga < 2:5953050/93‑1 (MQ=255)
cgTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCga < 2:5667842/93‑1 (MQ=255)
tggctggcAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAAc < 1:3816027/93‑1 (MQ=255)
tggctggcAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAAc < 2:6262509/93‑1 (MQ=255)
tggctggcAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAAc > 1:5572319/1‑93 (MQ=255)
tggcAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGAt > 1:5118924/1‑93 (MQ=255)
ggcAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCGCCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGAtt < 2:3730517/93‑1 (MQ=255)
ggcAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGGTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGAtt > 2:2425602/1‑93 (MQ=255)
aGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAAt < 2:3763596/93‑1 (MQ=255)
aGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAAt < 2:2236758/93‑1 (MQ=255)
aGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAAt > 2:1033439/1‑93 (MQ=255)
gACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATc < 2:3210093/93‑1 (MQ=255)
gACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATc > 1:6460169/1‑93 (MQ=255)
gcGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCg < 1:6257738/92‑1 (MQ=255)
aCGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGACACTGATTAATCg > 2:3416717/1‑93 (MQ=255)
cGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGc < 2:1896971/93‑1 (MQ=255)
cGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGc > 1:1812380/1‑93 (MQ=255)
gTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGcc > 2:6445988/1‑93 (MQ=255)
tttGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGt < 2:4720571/93‑1 (MQ=255)
ttGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTc < 2:4427817/93‑1 (MQ=255)
gAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGc < 2:1422353/93‑1 (MQ=255)
aGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCg > 1:2556925/1‑93 (MQ=255)
gCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCgg > 1:731763/1‑93 (MQ=255)
gCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCgg > 2:4243414/1‑93 (MQ=255)
cTGGTGCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGc < 2:750836/93‑1 (MQ=255)
ggTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCaa < 1:3646352/93‑1 (MQ=255)
gTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAAc < 2:4813049/93‑1 (MQ=255)
ttCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACg > 1:1273938/1‑93 (MQ=255)
cccccGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACgtg < 2:5781797/93‑1 (MQ=255)
cccccGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGGCGTCAGCGGCAACgtg > 1:5951804/1‑93 (MQ=255)
ccccGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACgtgt > 1:5374769/1‑93 (MQ=255)
cccGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTa < 1:2370387/93‑1 (MQ=255)
ccGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTAt > 1:106372/1‑93 (MQ=255)
ccGGTCAGGTTCACCGCATCGCTAAGTTTGGCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTAt < 2:5427479/93‑1 (MQ=255)
cGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTAtt < 2:6006253/93‑1 (MQ=255)
ggTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTAttt < 2:231333/93‑1 (MQ=255)
ggTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTAttt > 2:6586668/1‑93 (MQ=255)
gTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACTGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTg > 2:431388/1‑93 (MQ=255)
gTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTg > 2:4530058/1‑93 (MQ=255)
gTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTg > 2:1544372/1‑93 (MQ=255)
gTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTg > 1:3340959/1‑93 (MQ=255)
tCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGc < 2:5077451/93‑1 (MQ=255)
tCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGc > 1:390159/1‑93 (MQ=255)
cAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGcc > 1:6598667/1‑93 (MQ=255)
aGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCg > 1:3176580/1‑93 (MQ=255)
ggTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGt > 1:1115514/1‑93 (MQ=255)
tCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGa < 2:1886526/93‑1 (MQ=255)
tCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGa > 2:5196754/1‑93 (MQ=255)
cACCGCATCGCTAAGTTTGTCGTGACGCCATTCGCCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGAc < 1:5744709/93‑1 (MQ=255)
cccGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGAcc < 1:3705062/92‑1 (MQ=255)
ccGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCg < 1:3269828/93‑1 (MQ=255)
ccGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCg > 1:5199272/1‑93 (MQ=255)
gCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTa < 1:2163329/93‑1 (MQ=255)
cATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTAt < 2:3827033/93‑1 (MQ=255)
cATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTAt > 1:4688943/1‑93 (MQ=255)
aTCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTAtt < 2:1147463/93‑1 (MQ=255)
gCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCt < 1:5802455/93‑1 (MQ=255)
cTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCtt > 2:5268592/1‑93 (MQ=255)
cTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCtt > 1:3953505/1‑93 (MQ=255)
tAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCttt < 1:4321016/93‑1 (MQ=255)
aGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCg > 1:1893905/1‑93 (MQ=255)
tttGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGa > 1:3015463/1‑93 (MQ=255)
ttGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGaa < 2:5616222/93‑1 (MQ=255)
ttGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGaa > 2:805465/1‑93 (MQ=255)
tGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAg < 1:42658/93‑1 (MQ=255)
gTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGt < 2:447205/93‑1 (MQ=255)
tGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATc < 1:2360675/93‑1 (MQ=255)
tGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATc < 2:2799156/93‑1 (MQ=255)
tGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATc < 2:3630102/93‑1 (MQ=255)
tGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATc > 2:1346739/1‑93 (MQ=255)
gACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCg > 2:1770235/1‑93 (MQ=255)
gACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCg < 1:3855605/93‑1 (MQ=255)
gACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCg < 2:2611358/93‑1 (MQ=255)
aCGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCgg < 1:2584240/93‑1 (MQ=255)
cGCCAGTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCggg < 1:288069/93‑1 (MQ=255)
cATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGtctg > 1:1453906/1‑93 (MQ=255)
aTTCACCGCCAACGGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGgctgc < 2:4099564/93‑1 (MQ=255)
aTTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGgctgc > 2:2933191/1‑93 (MQ=255)
aTTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGgctgc > 2:767022/1‑93 (MQ=255)
ttCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGgctgct > 1:1976059/1‑93 (MQ=255)
ttCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGgctgct < 1:2470226/93‑1 (MQ=255)
cACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGt < 1:358314/93‑1 (MQ=255)
aCCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGtt < 1:6015110/93‑1 (MQ=255)
ccGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTg > 2:1972908/1‑93 (MQ=255)
ccGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTg > 1:4712832/1‑93 (MQ=255)
ccGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTg > 1:563477/1‑93 (MQ=255)
ccGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTg > 1:441505/1‑93 (MQ=255)
ccGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTg < 2:3506211/93‑1 (MQ=255)
cGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGc > 2:2144330/1‑93 (MQ=255)
ccAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCa > 1:2913498/1‑93 (MQ=255)
ccAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCa > 2:1669994/1‑93 (MQ=255)
cAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAg > 1:6213451/1‑93 (MQ=255)
cAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAg < 1:1638897/93‑1 (MQ=255)
aaCCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAgg > 1:3660404/1‑93 (MQ=255)
aaCCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAgg < 1:3086363/93‑1 (MQ=255)
aCCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAggg > 2:3117426/1‑93 (MQ=255)
ccGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAGGGt < 2:3848867/93‑1 (MQ=255)
|
CGTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAGGGTTT > NC_000913/2243703‑2243884
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGCGTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAGGGTTTTT > NC_000913/2243700‑2243886
|
GCGCGTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGC < SRR4302547.5905447/94‑1 (MQ=60)
GCGCGTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGCTTCACCGCATCGCTAAGTTTGTCGTGACCCCATTCCCCGCCAACCGC < SRR4302547.1744831/94‑1 (MQ=60)
CGCGTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCG > SRR4302547.919065/1‑94 (MQ=60)
CGCGTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCG < SRR4302547.746320/94‑1 (MQ=60)
GCGTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGA > SRR4302547.2470309/1‑94 (MQ=60)
CGTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGTGAG < SRR4302547.4112072/94‑1 (MQ=60)
CGTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAG < SRR4302547.582242/94‑1 (MQ=60)
CGTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAG < SRR4302547.51555/94‑1 (MQ=60)
CGTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAG < SRR4302547.4158916/94‑1 (MQ=60)
GTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGA > SRR4302547.4503968/1‑94 (MQ=60)
CTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAAC > SRR4302547.5687220/1‑94 (MQ=60)
CTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAAC < SRR4302547.371534/94‑1 (MQ=60)
TGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACT < SRR4302547.3893782/94‑1 (MQ=60)
TGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACT > SRR4302547.6488723/1‑94 (MQ=60)
GCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGA < SRR4302547.4389261/94‑1 (MQ=60)
CTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCCACCGCGAGAAACTGAT > SRR4302547.4520319/1‑94 (MQ=60)
CTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGAT > SRR4302547.5224388/1‑94 (MQ=60)
GGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTA < SRR4302547.270270/94‑1 (MQ=60)
GGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTA < SRR4302547.4431507/94‑1 (MQ=60)
AGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATC > SRR4302547.6594702/1‑94 (MQ=60)
AGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATC > SRR4302547.115891/1‑94 (MQ=60)
GCGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGC < SRR4302547.6387728/94‑1 (MQ=60)
ACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGC < SRR4302547.4138306/94‑1 (MQ=60)
ACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGC > SRR4302547.1848187/1‑94 (MQ=60)
GTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCG < SRR4302547.3732469/94‑1 (MQ=60)
TTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGT < SRR4302547.150733/94‑1 (MQ=60)
TTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTC > SRR4302547.2471370/1‑94 (MQ=60)
TTGTAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCA < SRR4302547.1422990/94‑1 (MQ=60)
TTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCA < SRR4302547.4004176/94‑1 (MQ=60)
TTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCA < SRR4302547.2613647/94‑1 (MQ=60)
TGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAG > SRR4302547.3381934/1‑94 (MQ=60)
TGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAG > SRR4302547.3867666/1‑94 (MQ=60)
GGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGC < SRR4302547.1740154/94‑1 (MQ=60)
GAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCG > SRR4302547.2608561/1‑94 (MQ=60)
GAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCG < SRR4302547.6374755/94‑1 (MQ=60)
AGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGG > SRR4302547.745429/1‑94 (MQ=60)
CTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCA > SRR4302547.5557624/1‑94 (MQ=60)
CTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCA < SRR4302547.3743432/94‑1 (MQ=60)
GGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAAC > SRR4302547.3307156/1‑94 (MQ=60)
GGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAAC < SRR4302547.3720723/94‑1 (MQ=60)
GTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACG > SRR4302547.3940460/1‑94 (MQ=60)
GTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACG > SRR4302547.1299600/1‑94 (MQ=60)
TCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGGCGTCAGCGGCAACGTG > SRR4302547.6075231/1‑94 (MQ=60)
TCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTG < SRR4302547.296953/94‑1 (MQ=60)
CCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGT > SRR4302547.6095443/1‑94 (MQ=60)
CCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGT > SRR4302547.5485695/1‑94 (MQ=60)
CCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTA > SRR4302547.6118353/1‑94 (MQ=60)
CCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTAT > SRR4302547.108316/1‑94 (MQ=60)
CCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTAT < SRR4302547.2418434/94‑1 (MQ=60)
CCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATT < SRR4302547.536993/94‑1 (MQ=60)
CCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATT < SRR4302547.2407281/94‑1 (MQ=60)
CGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTT > SRR4302547.6335462/1‑94 (MQ=60)
GGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTG > SRR4302547.2183946/1‑94 (MQ=60)
GGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTG < SRR4302547.3678884/94‑1 (MQ=60)
GGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTG > SRR4302547.5203972/1‑94 (MQ=60)
GGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTG > SRR4302547.3408575/1‑94 (MQ=60)
GGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTG > SRR4302547.2803378/1‑94 (MQ=60)
GTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGC > SRR4302547.397401/1‑94 (MQ=60)
TCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCC < SRR4302547.4335489/94‑1 (MQ=60)
TCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCC > SRR4302547.6736032/1‑94 (MQ=60)
CAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCG > SRR4302547.3239849/1‑94 (MQ=60)
CAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCG > SRR4302547.3604782/1‑94 (MQ=60)
CAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCG > SRR4302547.6220795/1‑94 (MQ=60)
AGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGT < SRR4302547.5239911/94‑1 (MQ=60)
AGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGT > SRR4302547.1137973/1‑94 (MQ=60)
AGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGT < SRR4302547.2294061/94‑1 (MQ=60)
GGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTC > SRR4302547.2000721/1‑94 (MQ=60)
GGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTC < SRR4302547.5295843/94‑1 (MQ=60)
GGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTC > SRR4302547.2577104/1‑94 (MQ=60)
GTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCG < SRR4302547.5895647/94‑1 (MQ=60)
CACCGCATCGCTAAGTTTGTCGTGACGCCATTCGCCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACC < SRR4302547.5863417/94‑1 (MQ=60)
CACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACC < SRR4302547.927722/94‑1 (MQ=60)
CCCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCG < SRR4302547.3780696/94‑1 (MQ=60)
ACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCG < SRR4302547.3899220/94‑1 (MQ=60)
ACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCG > SRR4302547.5688404/1‑94 (MQ=60)
ACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCG > SRR4302547.5306269/1‑94 (MQ=60)
CCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGT < SRR4302547.3335279/94‑1 (MQ=60)
CGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTA > SRR4302547.3780224/1‑94 (MQ=60)
GCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTAT > SRR4302547.4786057/1‑94 (MQ=60)
GCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTAT < SRR4302547.2206581/94‑1 (MQ=60)
GCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTT > SRR4302547.4080999/1‑94 (MQ=60)
GCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTT < SRR4302547.1091290/94‑1 (MQ=60)
GCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTT > SRR4302547.4033909/1‑94 (MQ=60)
GCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTT < SRR4302547.5922502/94‑1 (MQ=60)
CTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTT > SRR4302547.3193238/1‑94 (MQ=60)
CTAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTT > SRR4302547.329858/1‑94 (MQ=60)
TAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTC < SRR4302547.4409966/94‑1 (MQ=60)
TAAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTC < SRR4302547.3455411/94‑1 (MQ=60)
AAGTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCG > SRR4302547.1931335/1‑94 (MQ=60)
AGTTTATCGTGACGCCATTCACCGCCAACCGCAAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGG < SRR4302547.2416524/94‑1 (MQ=60)
GTTTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGA > SRR4302547.3075429/1‑94 (MQ=60)
TTGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAG < SRR4302547.3115812/94‑1 (MQ=60)
TGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGT < SRR4302547.43439/94‑1 (MQ=60)
TGTCGTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGAGTAGTTGCCGTCGACCGTATTGCTTTCGGGAGT > SRR4302547.262475/1‑94 (MQ=60)
cgagcCGCCAATCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTAT < SRR4302547.5858964/89‑1 (MQ=60)
CGTGACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTAT > SRR4302547.1926378/1‑94 (MQ=60)
CGCGACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGGTAT > SRR4302547.1926379/1‑94 (MQ=60)
CTGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATC < SRR4302547.4805493/94‑1 (MQ=60)
TGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCG < SRR4302547.2408532/94‑1 (MQ=60)
TGACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCG < SRR4302547.4001040/94‑1 (MQ=60)
GACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGG > SRR4302547.673966/1‑94 (MQ=60)
GACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGG < SRR4302547.3934082/94‑1 (MQ=60)
ACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGG < SRR4302547.4852444/94‑1 (MQ=60)
ACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGG > SRR4302547.4756847/1‑94 (MQ=60)
ACGCCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGG < SRR4302547.2636390/94‑1 (MQ=60)
CGCCAGTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGC < SRR4302547.293418/94‑1 (MQ=60)
CCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTG < SRR4302547.293849/94‑1 (MQ=60)
CCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGTCTG > SRR4302547.1482973/1‑94 (MQ=60)
CCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTG > SRR4302547.3134780/1‑94 (MQ=60)
CCATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTG < SRR4302547.5896786/94‑1 (MQ=60)
ATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCT < SRR4302547.6734681/94‑1 (MQ=60)
ATTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCT > SRR4302547.2015299/1‑94 (MQ=60)
TTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTG > SRR4302547.5934239/1‑94 (MQ=60)
TTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTG < SRR4302547.3930495/94‑1 (MQ=60)
TTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTG < SRR4302547.2520155/94‑1 (MQ=60)
TTCACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTG < SRR4302547.2538430/94‑1 (MQ=60)
TCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGT > SRR4302547.713845/1‑94 (MQ=60)
CACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTT > SRR4302547.1954156/1‑94 (MQ=60)
CACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTT > SRR4302547.1160895/1‑94 (MQ=60)
CACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTT < SRR4302547.1551787/94‑1 (MQ=60)
CACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTT < SRR4302547.433764/94‑1 (MQ=60)
CACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTT < SRR4302547.364963/94‑1 (MQ=60)
CACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTT > SRR4302547.3029942/1‑94 (MQ=60)
ACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTG > SRR4302547.573622/1‑94 (MQ=60)
ACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTG > SRR4302547.4810409/1‑94 (MQ=60)
ACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTG > SRR4302547.449734/1‑94 (MQ=60)
ACCGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTG < SRR4302547.6139953/94‑1 (MQ=60)
CGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCC > SRR4302547.5696068/1‑94 (MQ=60)
CGCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCC < SRR4302547.6435696/94‑1 (MQ=60)
GCCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCA > SRR4302547.2971614/1‑94 (MQ=60)
CCAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAG > SRR4302547.6342478/1‑94 (MQ=60)
CAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAGG > SRR4302547.3735071/1‑94 (MQ=60)
CAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAGG > SRR4302547.5161842/1‑94 (MQ=60)
CAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAGG < SRR4302547.1671291/94‑1 (MQ=60)
CAACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAGG < SRR4302547.818492/94‑1 (MQ=60)
AACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAGGG < SRR4302547.3147607/94‑1 (MQ=60)
ACCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAGGGT < SRR4302547.4100833/94‑1 (MQ=60)
CCGCGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAGGGTT < SRR4302547.5373639/94‑1 (MQ=60)
TGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAGGGTTTTT > SRR4302547.2148201/1‑94 (MQ=60)
CGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAGGGTTTTT < SRR4302547.714017/94‑1 (MQ=60)
CGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAGGGTTTTT < SRR4302547.1085098/94‑1 (MQ=60)
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GCGCGTACTGGCTGGCAGACGTTTTGGAGCTGGTTCCCCCGGTCAGGTTCACCGCATCGCTAAGTTTGTCGTGACGCCATTCACCGCCAACCGTGAGAAACTGATTAATCGCCGTCAGCGGCAACGTGTATTTGCCGTCGACCGTATTGCTTTCGGAAGTTATCGGGCTGCTGTTGCCAGGGTTTTT > NC_000913/2243700‑2243886
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
