Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,383,620 |
C→T |
V41V (GTG→GTA) |
yfbK ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,383,620 | 0 | C | T | 90.0%
| 504.4
/ 32.0
| 160 | V41V (GTG→GTA) | yfbK | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (7/9); new base T (58/86); total (65/95) |
| Fisher's exact test for biased strand distribution p-value = 7.94e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.37e-01 |
Only 100 of 160 total aligned reads displayed.
TGAATATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAACTACTCA > NC_000913/2383530‑2383711
|
tGAATATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTAc > 2:3990512/1‑93 (MQ=255)
gAATATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACt < 1:1300178/93‑1 (MQ=255)
gAATATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACt > 2:6009720/1‑93 (MQ=255)
aaTATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACtt < 2:5630994/93‑1 (MQ=255)
aaTATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACtt > 1:4598097/1‑93 (MQ=255)
tatTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTtgc < 1:3219821/93‑1 (MQ=255)
tatTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTtgc < 1:6025901/93‑1 (MQ=255)
tatTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTtgc > 1:4102257/1‑93 (MQ=255)
tatGGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTtgc < 1:4258544/93‑1 (MQ=255)
atTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTtgct < 2:5973401/93‑1 (MQ=255)
atTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTtgct < 1:1836855/93‑1 (MQ=255)
ttgttgCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTtgctg < 2:1933737/93‑1 (MQ=255)
tgttgCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTtgctgc < 1:1160633/93‑1 (MQ=255)
tgttgCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTtgctgc < 2:5016243/93‑1 (MQ=255)
tgCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGctct < 2:4400362/93‑1 (MQ=255)
cACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCtgt > 2:1554810/1‑93 (MQ=255)
aCTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCtgtg < 2:3085934/93‑1 (MQ=255)
ttcttGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTggg > 2:4867478/1‑93 (MQ=255)
tcttGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGa < 1:5535708/93‑1 (MQ=255)
ttGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGt < 1:1586831/93‑1 (MQ=255)
ttGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGt > 2:848423/1‑93 (MQ=255)
gCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTAc > 1:6309563/1‑93 (MQ=255)
gCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTAc < 2:4293905/93‑1 (MQ=255)
gCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTAc < 2:5095621/93‑1 (MQ=255)
gCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTAc < 2:815723/93‑1 (MQ=255)
cTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACt < 1:2255402/93‑1 (MQ=255)
tGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTg < 1:5997217/93‑1 (MQ=255)
tGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTg > 1:604802/1‑93 (MQ=255)
tGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTg < 2:2228093/93‑1 (MQ=255)
gCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGgt > 2:2738916/1‑93 (MQ=255)
gCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGgt > 2:1050181/1‑93 (MQ=255)
ccAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGgtt < 1:5172673/93‑1 (MQ=255)
aaGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGgttgt > 1:636532/1‑93 (MQ=255)
aaGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGgttgt > 1:4813530/1‑93 (MQ=255)
aaGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGgttgt > 2:6113340/1‑93 (MQ=255)
aaGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGgttgt > 1:3218658/1‑93 (MQ=255)
aGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGgttgtt < 2:1721366/93‑1 (MQ=255)
aGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGgttgtt < 1:2790037/93‑1 (MQ=255)
aGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGgttgtt > 2:6545111/1‑93 (MQ=255)
ggCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGgttgttg > 1:4934148/1‑93 (MQ=255)
gCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGgttgttgt < 2:6605897/93‑1 (MQ=255)
cTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGgttgttgtt > 1:5658368/1‑93 (MQ=255)
ttCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGc < 1:1909398/93‑1 (MQ=255)
gcggcggcggcgCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGa < 1:805038/93‑1 (MQ=255)
gcggcggcggcgCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGa > 1:6546848/1‑93 (MQ=255)
cggcggcggcgCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGAc < 2:1261452/93‑1 (MQ=255)
gcggcggcgCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACtt < 2:3446584/93‑1 (MQ=255)
ggcggcgCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTc < 1:3717388/93‑1 (MQ=255)
gcggcgCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTcc > 1:5288826/1‑93 (MQ=255)
cggcgCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCt < 2:6096671/93‑1 (MQ=255)
ggcgCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCtt > 2:5020577/1‑93 (MQ=255)
gcgcTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTa > 1:1085986/1‑93 (MQ=255)
cgcTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTAt < 1:3113925/93‑1 (MQ=255)
cgcTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTAt < 1:1007760/93‑1 (MQ=255)
cgcTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTAt < 2:6353478/93‑1 (MQ=255)
cgcTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTAt < 2:4482946/93‑1 (MQ=255)
cgcTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTAt < 2:5888374/93‑1 (MQ=255)
gcTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTAtt > 1:66090/1‑93 (MQ=255)
gcTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTAtt > 2:3287896/1‑93 (MQ=255)
cTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATtc > 1:2370835/1‑93 (MQ=255)
tttGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATtct < 2:5249975/93‑1 (MQ=255)
ttGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATtctc < 2:4864899/93‑1 (MQ=255)
tGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCa < 1:2598464/93‑1 (MQ=255)
tGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCa < 1:4401548/93‑1 (MQ=255)
gCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGTTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAg < 1:2465895/93‑1 (MQ=255)
cTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAgg > 1:1019930/1‑93 (MQ=255)
cTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAgg > 2:2864634/1‑93 (MQ=255)
tCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGt > 2:3219578/1‑93 (MQ=255)
cAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGtt < 1:4333688/93‑1 (MQ=255)
gCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGttcc < 1:3465505/93‑3 (MQ=255)
gCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGc < 2:5308903/93‑1 (MQ=255)
gCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGc > 1:5454386/1‑93 (MQ=255)
gCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGc > 2:5365202/1‑93 (MQ=255)
gCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGc < 2:4738679/93‑1 (MQ=255)
ccTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCg > 1:3569273/1‑93 (MQ=255)
ctctTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCgg > 1:260033/1‑93 (MQ=255)
ctTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGcc < 1:772637/93‑1 (MQ=255)
ttttATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGccc < 2:1764396/93‑1 (MQ=255)
tttATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCca > 2:964226/1‑93 (MQ=255)
tttATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCca > 1:3473808/1‑93 (MQ=255)
tttATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCca < 2:447288/93‑1 (MQ=255)
tATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGGTGCGGCCcaca > 1:2803323/1‑93 (MQ=255)
tGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATcc < 2:1918852/93‑1 (MQ=255)
tGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATcc < 1:6427150/93‑1 (MQ=255)
gCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCt < 1:1082271/93‑1 (MQ=255)
aGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGa < 1:3521562/93‑1 (MQ=255)
aGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGa > 1:3899727/1‑93 (MQ=255)
cTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACa > 2:4153819/1‑93 (MQ=255)
cTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACa > 1:1995482/1‑93 (MQ=255)
ttGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACaa > 1:1474680/1‑93 (MQ=255)
gctgcGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACaaaa < 1:5007229/93‑1 (MQ=255)
tgcTCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCCGACAAAATc < 1:3701309/93‑1 (MQ=255)
tgcGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATc < 2:3390168/93‑1 (MQ=255)
gcgcGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCa > 1:3991688/1‑93 (MQ=255)
gcgcGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCa < 1:162483/93‑1 (MQ=255)
cgGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAac < 1:4920782/93‑1 (MQ=255)
ggCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAact < 1:3796740/93‑1 (MQ=255)
ggCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAact < 2:1328178/93‑1 (MQ=255)
cAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAactac < 1:6586099/93‑1 (MQ=255)
aaGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAactact > 2:3898792/1‑93 (MQ=255)
|
TGAATATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAACTACTCA > NC_000913/2383530‑2383711
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTCTGAATATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAACTACTCATA > NC_000913/2383527‑2383713
|
GTCTGAATATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGT < SRR4302547.3701828/94‑1 (MQ=60)
CTGAATATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTAC > SRR4302547.3482984/1‑94 (MQ=60)
GAATATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTT > SRR4302547.4693256/1‑94 (MQ=60)
GAATATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTT < SRR4302547.1326343/94‑1 (MQ=60)
AATATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTG > SRR4302547.2078176/1‑94 (MQ=60)
ATATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGC > SRR4302547.6170087/1‑94 (MQ=60)
ATATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGC > SRR4302547.4185668/1‑94 (MQ=60)
TATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCT < SRR4302547.6150966/94‑1 (MQ=60)
TATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCT < SRR4302547.2421826/94‑1 (MQ=60)
TATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCT < SRR4302547.3284043/94‑1 (MQ=60)
TATGGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCT < SRR4302547.4345686/94‑1 (MQ=60)
ATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTG > SRR4302547.4459968/1‑94 (MQ=60)
ATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTG < SRR4302547.1873168/94‑1 (MQ=60)
TGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCT < SRR4302547.1184109/94‑1 (MQ=60)
TGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCT < SRR4302547.1113740/94‑1 (MQ=60)
TTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCT > SRR4302547.3597040/1‑94 (MQ=60)
TTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGA < SRR4302547.355649/94‑1 (MQ=60)
TCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAG < SRR4302547.793228/94‑1 (MQ=60)
TCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAG < SRR4302547.5649955/94‑1 (MQ=60)
TTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTA < SRR4302547.1618372/94‑1 (MQ=60)
TGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTAC < SRR4302547.4956782/94‑1 (MQ=60)
TGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTAC > SRR4302547.6440741/1‑94 (MQ=60)
CTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTG < SRR4302547.2300949/94‑1 (MQ=60)
CTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTG > SRR4302547.616036/1‑94 (MQ=60)
TGGGCCAAGGCTTTCGCGGCGTCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGG < SRR4302547.6446756/94‑1 (MQ=60)
TGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGG < SRR4302547.6121669/94‑1 (MQ=60)
GGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGG < SRR4302547.6558874/94‑1 (MQ=60)
GGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGG < SRR4302547.5109213/94‑1 (MQ=60)
GGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGG < SRR4302547.6687359/94‑1 (MQ=60)
GCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTGTTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTT < SRR4302547.4585154/94‑1 (MQ=60)
GCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTT < SRR4302547.2788434/94‑1 (MQ=60)
GCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTT < SRR4302547.5206278/94‑1 (MQ=60)
CCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTG < SRR4302547.5279159/94‑1 (MQ=60)
CAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGT > SRR4302547.648287/1‑94 (MQ=60)
CAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGT > SRR4302547.4913290/1‑94 (MQ=60)
CAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGGTTGT > SRR4302547.3282860/1‑94 (MQ=60)
AAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTT > SRR4302547.4274470/1‑94 (MQ=60)
AGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTG < SRR4302547.2845911/94‑1 (MQ=60)
AGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTG > SRR4302547.5036354/1‑94 (MQ=60)
GGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGT > SRR4302547.1100769/1‑94 (MQ=60)
GCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTT > SRR4302547.5775168/1‑94 (MQ=60)
TTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCT < SRR4302547.1947184/94‑1 (MQ=60)
TTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCT < SRR4302547.5911674/94‑1 (MQ=60)
CGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGA > SRR4302547.6683103/1‑94 (MQ=60)
GCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGAC < SRR4302547.820299/94‑1 (MQ=60)
CGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTC > SRR4302547.2575785/1‑94 (MQ=60)
GGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCC < SRR4302547.3793271/94‑1 (MQ=60)
GGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCC > SRR4302547.5397934/1‑94 (MQ=60)
GGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTA > SRR4302547.1107687/1‑94 (MQ=60)
GCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTAT > SRR4302547.1555044/1‑94 (MQ=60)
CGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATT < SRR4302547.1027438/94‑1 (MQ=60)
CGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATT < SRR4302547.3175644/94‑1 (MQ=60)
CGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATT > SRR4302547.67323/1‑94 (MQ=60)
GCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTC > SRR4302547.2418890/1‑94 (MQ=60)
TGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAG < SRR4302547.2650845/94‑1 (MQ=60)
TGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAG < SRR4302547.4492183/94‑1 (MQ=60)
TGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAG < SRR4302547.6783446/94‑1 (MQ=60)
GCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGTTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGG < SRR4302547.2515732/94‑1 (MQ=60)
GCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGG > SRR4302547.1039919/1‑94 (MQ=60)
TCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTT < SRR4302547.3189146/94‑1 (MQ=60)
CAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTG > SRR4302547.3155939/1‑94 (MQ=60)
CAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTG < SRR4302547.4422841/94‑1 (MQ=60)
CAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTG < SRR4302547.190438/94‑1 (MQ=60)
CAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTG > SRR4302547.1817489/1‑94 (MQ=60)
AGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGC > SRR4302547.5567089/1‑94 (MQ=60)
AGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGC < SRR4302547.3904743/94‑1 (MQ=60)
GCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCG > SRR4302547.3642085/1‑94 (MQ=60)
GCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTCCG < SRR4302547.3536176/94‑1 (MQ=60)
CCTCTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGG > SRR4302547.264893/1‑94 (MQ=60)
CTTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCC < SRR4302547.787241/94‑1 (MQ=60)
TTTTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCA > SRR4302547.3544653/1‑94 (MQ=60)
TTATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGGTGCGGCCCACA > SRR4302547.2859441/1‑94 (MQ=60)
ATTGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATC > SRR4302547.5477963/1‑94 (MQ=60)
TGCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCT < SRR4302547.6561142/94‑1 (MQ=60)
GCAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTG < SRR4302547.1103883/94‑1 (MQ=60)
CAGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGA > SRR4302547.3979020/1‑94 (MQ=60)
AGCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGAC < SRR4302547.3593446/94‑1 (MQ=60)
GCTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACA > SRR4302547.2035171/1‑94 (MQ=60)
CTTGCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAA > SRR4302547.1504138/1‑94 (MQ=60)
GCTGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAAT < SRR4302547.5110763/94‑1 (MQ=60)
TGCTCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCCGACAAAATCA < SRR4302547.3776857/94‑1 (MQ=60)
TGCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCA > SRR4302547.4072850/1‑94 (MQ=60)
GCGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAA < SRR4302547.165461/94‑1 (MQ=60)
CGCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAA > SRR4302547.4014607/1‑94 (MQ=60)
GCGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAAC > SRR4302547.1208559/1‑94 (MQ=60)
CGGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAACT < SRR4302547.5022695/94‑1 (MQ=60)
GGCAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAACTA < SRR4302547.3874143/94‑1 (MQ=60)
CAAGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAACTACT < SRR4302547.6723226/94‑1 (MQ=60)
AAGTACTTGCTGCTCTGTGGGAGTACTGGGTAGTTGTTGCTGACTTCCCTTATTCTCAGGTTGCCGCCCACATCCTGACAAAATCAAACTACTC < SRR4302547.3789806/94‑1 (MQ=60)
AGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAACTACTCA < SRR4302547.4347467/94‑1 (MQ=60)
AGTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAACTACTCA < SRR4302547.2399491/94‑1 (MQ=60)
GTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAACTACTCAT < SRR4302547.992958/94‑1 (MQ=60)
GTACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAACTACTCAT < SRR4302547.480547/94‑1 (MQ=60)
GCACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAACTACTCAT < SRR4302547.5720111/94‑1 (MQ=60)
TACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAACTACTCATA > SRR4302547.6195465/1‑94 (MQ=60)
TACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAACTACTCATA > SRR4302547.1019288/1‑94 (MQ=60)
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GTCTGAATATTGTTGCACTTCTTGCTGGGCCAAGGCTTTCGCGGCGGCGGCGCTTTGCTCAGCCTCTTTTATTGCAGCTTGCTGCGCGGCAAGCACTTGCTGCTCTGTGGGAGTACTGGGTTGTTGTTGCTGACTTTCCTTATTCTCAGGTTGCGGCCCACATCCTGACAAAATCAAACTACTCATA > NC_000913/2383527‑2383713
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
