Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,391,634 |
A→G |
V478A (GTG→GCG) |
nuoL ← |
NADH dehydrogenase I chain L |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,391,634 | 0 | A | G | 85.9%
| 564.1
/ 75.4
| 220 | V478A (GTG→GCG) | nuoL | NADH dehydrogenase I chain L |
| Reads supporting (aligned to +/- strand): ref base A (10/21); new base G (58/131); total (68/152) |
| Fisher's exact test for biased strand distribution p-value = 8.37e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 |
Only 100 of 226 total aligned reads displayed.
CCAGCAGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCTTTC > NC_000913/2391545‑2391723
|
ccAGCAGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAgcgcgc > 1:5319041/1‑93 (MQ=255)
cagcagAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGcc < 1:1264049/93‑1 (MQ=255)
agcagAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGccc < 2:1309431/93‑1 (MQ=255)
agcagAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGccc < 1:3684245/93‑1 (MQ=255)
agcagAATGCCAACCACCGCTACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGccc < 1:2971586/93‑1 (MQ=255)
gcagAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCt > 2:2715956/1‑93 (MQ=255)
agAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGc > 2:6000644/1‑93 (MQ=255)
agAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGc < 1:558550/93‑1 (MQ=255)
gAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCa > 2:4292226/1‑93 (MQ=255)
gAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCCCCCTGCa > 1:4214828/1‑93 (MQ=255)
aaTGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAg < 2:1006362/93‑1 (MQ=255)
aaTGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAg < 1:1614443/93‑1 (MQ=255)
aaTGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAg < 2:4604870/93‑1 (MQ=255)
tGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAgcg < 2:5361584/93‑1 (MQ=255)
gCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCTCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAgcgg < 2:5454611/93‑1 (MQ=255)
ccGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAgcggc < 1:101691/93‑1 (MQ=255)
ccGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAgcggc > 1:3080920/1‑93 (MQ=255)
ccGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAgcggc < 1:2647681/93‑1 (MQ=255)
ccGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGACCTGCAgcggc > 1:4462058/1‑93 (MQ=255)
gACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGcggcgg > 1:3572027/1‑93 (MQ=255)
caccGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTAc < 2:4445778/93‑1 (MQ=255)
caccGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTAc < 2:5915655/93‑1 (MQ=255)
caccGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTAc < 2:5319786/93‑1 (MQ=255)
caccGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTAc > 1:2377606/1‑93 (MQ=255)
accGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACa > 1:456604/1‑93 (MQ=255)
ccGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACaa > 2:169785/1‑93 (MQ=255)
cgcgACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAAt < 1:6134308/93‑1 (MQ=255)
gcgACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATc < 1:19920/93‑1 (MQ=255)
cgACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCa > 2:3823858/1‑93 (MQ=255)
aCCACGCCATAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGt < 2:147323/93‑1 (MQ=255)
aCCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGTAGCACGCCCTGCAGCGGCGGTACAATCAGt > 1:5093163/1‑93 (MQ=255)
aCCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGt > 1:889245/1‑93 (MQ=255)
aCCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGt > 1:184396/1‑93 (MQ=255)
ccACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTg < 1:6075705/93‑1 (MQ=255)
cACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTgc < 1:3839440/93‑1 (MQ=255)
cACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTgc < 1:6245121/93‑1 (MQ=255)
cGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTgcgc > 1:4956497/1‑93 (MQ=255)
gCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCCGCGGTACAATCAGCGCGcc > 1:1499471/1‑93 (MQ=255)
ccAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCa > 1:1821545/1‑93 (MQ=255)
ccAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCa > 1:3229575/1‑93 (MQ=255)
cAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCaa > 2:1780137/1‑93 (MQ=255)
agagGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAAc < 1:694444/93‑1 (MQ=255)
gagGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACg < 1:6434468/93‑1 (MQ=255)
ggTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGaa > 1:4025513/1‑93 (MQ=255)
ggTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGaa < 1:4844668/93‑1 (MQ=255)
ggTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGaa < 1:2047840/93‑1 (MQ=255)
agTAATTTCCAGGATCAACATGCTGCCGTGCGACAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGaa < 2:4911280/92‑1 (MQ=255)
tAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAgg < 1:2889742/93‑1 (MQ=255)
tAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAgg < 1:6023042/93‑1 (MQ=255)
aTTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTg < 1:1085902/93‑1 (MQ=255)
tttCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTgg < 1:3712761/93‑1 (MQ=255)
tttCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTgg < 1:3823913/93‑1 (MQ=255)
cAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAg < 2:558412/93‑1 (MQ=255)
gggTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGGAAGGGGAAAGGa > 1:3318010/1‑93 (MQ=255)
gggTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGa < 2:2281115/93‑1 (MQ=255)
gggTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGa < 1:2685676/93‑1 (MQ=255)
gggTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGa < 2:3697846/93‑1 (MQ=255)
gTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATc < 2:5552470/93‑1 (MQ=255)
tCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATca < 1:2074470/93‑1 (MQ=255)
tCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATca < 2:3142866/93‑1 (MQ=255)
tCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATca < 1:4124025/93‑1 (MQ=255)
tCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATca < 1:5202305/93‑1 (MQ=255)
tCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATca < 2:2420748/93‑1 (MQ=255)
cAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATcag < 2:2849693/93‑1 (MQ=255)
aaCATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATcagc > 2:6501066/1‑93 (MQ=255)
aaCATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATcagc < 2:4491183/93‑1 (MQ=255)
aCATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATcagca > 2:6602076/1‑93 (MQ=255)
tgctgcCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAgcagca < 2:2216805/93‑1 (MQ=255)
gctgcCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGcac < 1:2192768/93‑1 (MQ=255)
tgcCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACaa < 2:561215/93‑1 (MQ=255)
tgcCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACaa > 1:1733095/1‑93 (MQ=255)
gcCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAAt < 1:4697534/93‑1 (MQ=255)
gcCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCACTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAAt > 2:3295230/1‑93 (MQ=255)
gcCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAAt < 2:2618822/93‑1 (MQ=255)
ccGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATc > 1:4256540/1‑93 (MQ=255)
cGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCa < 2:5031493/93‑1 (MQ=255)
cGTGCGCCAGTTCCGTCGTTTGC‑GAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAg < 2:2379683/93‑1 (MQ=255)
tGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGc < 2:3467890/93‑1 (MQ=255)
cgcCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCgg < 2:5183441/93‑1 (MQ=255)
gcCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGc > 1:4872521/1‑93 (MQ=255)
cAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAg < 1:2269937/93‑1 (MQ=255)
aGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAgg < 2:3055946/93‑1 (MQ=255)
gTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGc < 2:626325/93‑1 (MQ=255)
gTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGc < 2:399874/93‑1 (MQ=255)
gTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGc < 2:4398281/93‑1 (MQ=255)
ttCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCt < 1:2632420/93‑1 (MQ=255)
ttCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCt < 1:2489694/93‑1 (MQ=255)
ttCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCt < 1:4505909/93‑1 (MQ=255)
ttCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCt < 1:4382626/93‑1 (MQ=255)
ttCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCt < 2:6240340/93‑1 (MQ=255)
ccGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCtgt > 1:192459/1‑93 (MQ=255)
gtcgtTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCtgtgg > 1:6169696/1‑92 (MQ=255)
gtcgtTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGa < 2:689772/93‑1 (MQ=255)
gtcgtTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGa > 2:4920338/1‑93 (MQ=255)
gtTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGtt < 1:6554458/93‑1 (MQ=255)
cGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTAcccc < 2:2875595/93‑1 (MQ=255)
gAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCtt > 1:2770262/1‑93 (MQ=255)
aaGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCttt < 2:4551651/93‑1 (MQ=255)
aaGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCttt < 1:530072/93‑1 (MQ=255)
aGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCTTTc < 1:3141026/93‑1 (MQ=255)
|
CCAGCAGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCTTTC > NC_000913/2391545‑2391723
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGCCAGCAGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCTTTCACG > NC_000913/2391542‑2391726
|
CTGCCAGCAGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGC > SRR4302547.4774559/1‑94 (MQ=60)
GCCAGCAGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGC > SRR4302547.5428716/1‑94 (MQ=60)
CCAGCAGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCC > SRR4302547.3777063/1‑94 (MQ=60)
CAGCAGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCC < SRR4302547.1289503/94‑1 (MQ=60)
AGCAGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCT < SRR4302547.3759459/94‑1 (MQ=60)
AGCAGAATGCCAACCACCGCTACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCT < SRR4302547.3030728/94‑1 (MQ=60)
CAGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGC < SRR4302547.3987016/94‑1 (MQ=60)
AGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCCCCCTGCA > SRR4302547.4300856/1‑94 (MQ=60)
AGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCA < SRR4302547.568610/94‑1 (MQ=60)
GAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAG < SRR4302547.4680817/94‑1 (MQ=60)
AATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGC < SRR4302547.1646408/94‑1 (MQ=60)
ATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCTTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCG < SRR4302547.1874001/94‑1 (MQ=60)
TGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGG < SRR4302547.5412793/94‑1 (MQ=60)
GCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGC > SRR4302547.3142094/1‑94 (MQ=60)
GCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGACCTGCAGCGGC > SRR4302547.4554274/1‑94 (MQ=60)
CCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCG < SRR4302547.2700939/94‑1 (MQ=60)
CCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCG < SRR4302547.103563/94‑1 (MQ=60)
CCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGCTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCG < SRR4302547.4607160/94‑1 (MQ=60)
CGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGG > SRR4302547.3644897/1‑94 (MQ=60)
ACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTA < SRR4302547.5137570/94‑1 (MQ=60)
CCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTAC > SRR4302547.2425775/1‑94 (MQ=60)
CCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTAC < SRR4302547.5016500/94‑1 (MQ=60)
CACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACA > SRR4302547.465054/1‑94 (MQ=60)
CCCGCGACCACGCCAGAGGTAATTGCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAA < SRR4302547.3982529/94‑1 (MQ=60)
ACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAA > SRR4302547.2876188/1‑94 (MQ=60)
CGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATC < SRR4302547.6261560/94‑1 (MQ=60)
CGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATC < SRR4302547.1539835/94‑1 (MQ=60)
GCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCA < SRR4302547.20301/94‑1 (MQ=60)
CGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAG < SRR4302547.6193331/94‑1 (MQ=60)
CGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAG < SRR4302547.4466560/94‑1 (MQ=60)
GACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGTAGCACGCCCTGCAGCGGCGGTACAATCAGT > SRR4302547.5198202/1‑94 (MQ=60)
GACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGT > SRR4302547.906343/1‑94 (MQ=60)
GACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGT > SRR4302547.187855/1‑94 (MQ=60)
gcccgcCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTG < SRR4302547.895488/88‑1 (MQ=60)
ACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCAGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGCACAATCAGTG > SRR4302547.1278069/1‑94 (MQ=60)
CCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGC < SRR4302547.6201738/94‑1 (MQ=60)
CACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCG < SRR4302547.6374854/94‑1 (MQ=60)
CACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCG < SRR4302547.3917642/94‑1 (MQ=60)
ACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGC > SRR4302547.5059083/1‑94 (MQ=60)
CGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCCGCGGTACAATCAGCGCGCC > SRR4302547.1529382/1‑94 (MQ=60)
GCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGGCCTGCAGCGGCGGTACAATCAGTGCGCCA > SRR4302547.3004048/1‑94 (MQ=60)
GCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCA > SRR4302547.1857557/1‑94 (MQ=60)
GCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCA > SRR4302547.274055/1‑94 (MQ=60)
GCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCA > SRR4302547.284610/1‑94 (MQ=60)
GCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCA > SRR4302547.3294026/1‑94 (MQ=60)
CCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAA < SRR4302547.3322410/94‑1 (MQ=60)
CAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAAC > SRR4302547.6288537/1‑94 (MQ=60)
CAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAAC < SRR4302547.3890077/94‑1 (MQ=60)
CAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAAC > SRR4302547.2688757/1‑94 (MQ=60)
AGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACG < SRR4302547.707272/94‑1 (MQ=60)
GAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGA < SRR4302547.6568579/94‑1 (MQ=60)
GAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGA > SRR4302547.2022287/1‑94 (MQ=60)
AGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAA < SRR4302547.5359808/94‑1 (MQ=60)
AGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAA > SRR4302547.4107303/1‑94 (MQ=60)
AGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAA < SRR4302547.3907053/94‑1 (MQ=60)
GGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAG < SRR4302547.2088683/94‑1 (MQ=60)
GGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAG < SRR4302547.3238650/94‑1 (MQ=60)
GGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAG < SRR4302547.4945065/94‑1 (MQ=60)
GGTAATTTCCAGGGTCAACATGCTGCCGCGCCCCAGTTCCGTCGATTGCGGAAGCGCGCCCTGCAGCGGCGGTCCAGTCAGTGCGACAACGAAG > SRR4302547.703365/1‑94 (MQ=60)
GTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGG < SRR4302547.5232648/94‑1 (MQ=60)
GTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGG < SRR4302547.4282955/94‑1 (MQ=60)
GTAATTCCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGT < SRR4302547.243545/94‑1 (MQ=60)
TAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGT < SRR4302547.3532888/94‑1 (MQ=60)
TAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGT < SRR4302547.2947383/94‑1 (MQ=60)
TAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGT < SRR4302547.6148053/94‑1 (MQ=60)
AATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTG > SRR4302547.1943663/1‑94 (MQ=60)
AATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTG < SRR4302547.4946395/94‑1 (MQ=60)
ATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGG < SRR4302547.1107601/94‑1 (MQ=60)
TTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGA < SRR4302547.3788549/94‑1 (MQ=60)
TTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGA > SRR4302547.3697916/1‑94 (MQ=60)
TTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGA < SRR4302547.3901820/94‑1 (MQ=60)
TCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAA > SRR4302547.4447491/1‑94 (MQ=60)
CCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGATGGTGGAAAG < SRR4302547.6595049/94‑1 (MQ=60)
CAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGG < SRR4302547.6248060/94‑1 (MQ=60)
aggggcaacctgcttcctgGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGA < SRR4302547.3196954/75‑1 (MQ=60)
AGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGGAAGGGGAAAGGA > SRR4302547.3384969/1‑94 (MQ=60)
AGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGA > SRR4302547.5117391/1‑94 (MQ=60)
AGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGA < SRR4302547.2215793/94‑1 (MQ=60)
GGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGAT < SRR4302547.2311558/94‑1 (MQ=60)
GGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGAT < SRR4302547.2709864/94‑1 (MQ=60)
GGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGAT < SRR4302547.2739585/94‑1 (MQ=60)
TCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAG < SRR4302547.4207860/94‑1 (MQ=60)
TCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAG < SRR4302547.2115857/94‑1 (MQ=60)
TCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAG < SRR4302547.5309349/94‑1 (MQ=60)
TCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAG < SRR4302547.1892086/94‑1 (MQ=60)
CAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGC < SRR4302547.6347474/94‑1 (MQ=60)
CAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGC > SRR4302547.3252299/1‑94 (MQ=60)
CATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGC < SRR4302547.6210128/94‑1 (MQ=60)
TGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCAC < SRR4302547.2089229/94‑1 (MQ=60)
GCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACA > SRR4302547.2119811/1‑94 (MQ=60)
GCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACA < SRR4302547.2236786/94‑1 (MQ=60)
CTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAA > SRR4302547.1767139/1‑94 (MQ=60)
TGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGGACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGAAGCACAAT > SRR4302547.1662393/1‑94 (MQ=60)
GCCGTGCGCCAGTTGCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATC < SRR4302547.6438229/94‑1 (MQ=60)
GCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATC < SRR4302547.4794833/94‑1 (MQ=60)
GCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATC > SRR4302547.4343641/1‑94 (MQ=60)
CCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCA < SRR4302547.3064999/94‑1 (MQ=60)
CCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCA < SRR4302547.5460483/94‑1 (MQ=60)
CGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAG > SRR4302547.55828/1‑94 (MQ=60)
TGCGCCAGTTCCGTCGTATGCGGAAGCGCGCTCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCGCAATCAGCG < SRR4302547.6413536/94‑1 (MQ=60)
GCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGG < SRR4302547.4833318/94‑1 (MQ=60)
CGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGC > SRR4302547.4973491/1‑94 (MQ=60)
CGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGC > SRR4302547.6688527/1‑94 (MQ=60)
GCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCA > SRR4302547.4580279/1‑94 (MQ=60)
GCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCA > SRR4302547.4543808/1‑94 (MQ=60)
CAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGG < SRR4302547.266645/94‑1 (MQ=60)
CAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGG < SRR4302547.2315843/94‑1 (MQ=60)
GTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCT < SRR4302547.866020/94‑1 (MQ=60)
TTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTG < SRR4302547.2539995/94‑1 (MQ=60)
TTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTG < SRR4302547.2685428/94‑1 (MQ=60)
TTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTG < SRR4302547.1456516/94‑1 (MQ=60)
TTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTG < SRR4302547.4472769/94‑1 (MQ=60)
TTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTG < SRR4302547.4598953/94‑1 (MQ=60)
TCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGT > SRR4302547.196068/1‑94 (MQ=60)
CGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGG > SRR4302547.6297769/1‑94 (MQ=60)
CGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGA < SRR4302547.931187/94‑1 (MQ=60)
CGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGA < SRR4302547.4331083/94‑1 (MQ=60)
CGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGA < SRR4302547.2325617/94‑1 (MQ=60)
CGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGA > SRR4302547.3755910/1‑94 (MQ=60)
GTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAG > SRR4302547.1772295/1‑94 (MQ=60)
TCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGT > SRR4302547.2646748/1‑94 (MQ=60)
GTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTA < SRR4302547.4763318/94‑1 (MQ=60)
GTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTA < SRR4302547.6690937/94‑1 (MQ=60)
GTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTA < SRR4302547.1074100/94‑1 (MQ=60)
GTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTA < SRR4302547.2041327/94‑1 (MQ=60)
GCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTTTGAGTTACCCC < SRR4302547.4145074/94‑1 (MQ=60)
GGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCTT > SRR4302547.2825763/1‑94 (MQ=60)
GAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCTTT < SRR4302547.1613466/94‑1 (MQ=60)
AAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCTTTC < SRR4302547.5807625/94‑1 (MQ=60)
AAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCTTTC < SRR4302547.539646/94‑1 (MQ=60)
AGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCTTTCA < SRR4302547.3203428/94‑1 (MQ=60)
CGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCTTTCACG > SRR4302547.1094058/1‑94 (MQ=60)
|
CTGCCAGCAGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCTTTCACG > NC_000913/2391542‑2391726
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
