Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,656,601 |
T→C |
T119A (ACG→GCG) |
hscA ← |
HscA |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,656,601 | 0 | T | C | 99.6%
| 935.7
/ ‑5.1
| 254 | T119A (ACG→GCG) | hscA | HscA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (114/139); minor base A (1/0); total (115/139) |
| Fisher's exact test for biased strand distribution p-value = 4.53e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.06e-01 |
Only 100 of 266 total aligned reads displayed.
GCTCGCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGTTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCA > NC_000913/2656511‑2656690
|
tCGCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCa > 2:4509497/1‑93 (MQ=255)
tCGCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCa < 1:1693174/93‑1 (MQ=255)
gCCTGCCAGGGCTTCAGTTGCCCGCGTCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAat < 1:5359948/93‑1 (MQ=255)
gCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAat < 2:1726132/93‑1 (MQ=255)
tGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAatcat > 2:938710/1‑93 (MQ=255)
tGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAatcat < 1:5256938/93‑1 (MQ=255)
tGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAatcat < 2:5426796/93‑1 (MQ=255)
gCCAGGTCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTGCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAatcatc < 1:5475753/93‑1 (MQ=255)
gCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAatcatc < 2:1935935/93‑1 (MQ=255)
gCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAatcatc < 2:2407349/93‑1 (MQ=255)
cAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGGCCCGCCGCCGCTTCAATCATCgg > 1:1839289/1‑93 (MQ=255)
cAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCgg > 1:1811364/1‑93 (MQ=255)
cAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCgg > 1:3156164/1‑93 (MQ=255)
aGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGc > 2:3472262/1‑93 (MQ=255)
aGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGc < 1:3898412/93‑1 (MQ=255)
gggCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCggga > 1:6438968/1‑91 (MQ=255)
gggCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCa > 2:4109261/1‑93 (MQ=255)
gggCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCa < 2:3332158/93‑1 (MQ=255)
gggCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCa > 2:67373/1‑93 (MQ=255)
gggCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCa > 1:1202569/1‑93 (MQ=255)
gggCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCa < 1:4147128/93‑1 (MQ=255)
ggCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAg > 2:5226069/1‑93 (MQ=255)
gCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAgg < 1:6608442/93‑1 (MQ=255)
gttCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGc < 2:4817792/92‑1 (MQ=255)
cTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGc < 2:6401722/93‑1 (MQ=255)
cTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGc > 1:78419/1‑93 (MQ=255)
tCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCg > 1:2150655/1‑93 (MQ=255)
aGTTGCCCGCGCCACCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGtt < 1:5401410/93‑1 (MQ=255)
gTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGttt > 1:699561/1‑93 (MQ=255)
ttGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGtttt < 2:3824531/93‑1 (MQ=255)
ttGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGtttt > 1:6195236/1‑93 (MQ=255)
cccGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGc < 1:92343/93‑1 (MQ=255)
cgcgCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTg < 2:2882424/93‑1 (MQ=255)
cgcgCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTg < 1:5629022/93‑1 (MQ=255)
cgccgcCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGc < 1:4902186/93‑1 (MQ=255)
cgccgcCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGc > 2:2538203/1‑93 (MQ=255)
gccgccAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCCCTGGcc > 1:6372821/1‑93 (MQ=255)
ccgccAGTGCTTTGAGGATGTCCGCAGAAACGCGCACGGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCt < 1:441734/93‑1 (MQ=255)
ccgccAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCt < 2:5253266/93‑1 (MQ=255)
cgctAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTg < 1:1903319/93‑1 (MQ=255)
cgccAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTg > 1:1029468/1‑93 (MQ=255)
gccAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTgg > 1:3544408/1‑93 (MQ=255)
cAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGaa > 1:2336469/1‑93 (MQ=255)
aGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTGCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAAt < 1:6011499/93‑1 (MQ=255)
tGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTg < 2:1262202/93‑1 (MQ=255)
gCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGa < 2:3983498/93‑1 (MQ=255)
gCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGa < 1:6089943/93‑1 (MQ=255)
cTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGAt < 2:1990367/93‑1 (MQ=255)
cTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGAt > 1:718771/1‑93 (MQ=255)
tttGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATa < 1:5216558/93‑1 (MQ=255)
tttGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATa > 1:295189/1‑93 (MQ=255)
tttGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATa > 1:4799288/1‑93 (MQ=255)
ttGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATaa > 2:2822316/1‑93 (MQ=255)
ttGAGGATGTCCGCAGAAACGCGCACCGGATTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATaa < 1:3282523/93‑1 (MQ=255)
tGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAg > 1:1283549/1‑93 (MQ=255)
gAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAgg > 1:5692107/1‑93 (MQ=255)
aGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGc < 1:2887849/93‑1 (MQ=255)
ggATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGTATTGATAAGGCa > 2:5959368/1‑93 (MQ=255)
ggATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCa > 2:4226227/1‑93 (MQ=255)
ggATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCa > 2:515492/1‑93 (MQ=255)
tGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGAt < 1:6881/93‑1 (MQ=255)
tCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGc < 1:4487574/93‑1 (MQ=255)
gCAGAAACGCGCACCGGGGTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGa > 2:1201036/1‑93 (MQ=255)
cAGAACCGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGAt < 2:190575/93‑1 (MQ=255)
cAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGAt < 1:4095824/93‑1 (MQ=255)
cAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGAt > 2:1612555/1‑93 (MQ=255)
cAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGAt < 2:5615984/93‑1 (MQ=255)
aaaCGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGc < 2:2181669/93‑1 (MQ=255)
aaCGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCg > 1:4070291/1‑93 (MQ=255)
cgcgCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGtt < 1:3729065/93‑1 (MQ=255)
gcgcACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTg < 2:6055315/93‑1 (MQ=255)
gcgcACCGGCTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTg < 2:3208670/93‑1 (MQ=255)
cgcACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGc > 2:502897/1‑93 (MQ=255)
cccGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTgg < 2:1312006/92‑1 (MQ=255)
ccGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGa < 1:2456638/93‑1 (MQ=255)
ccGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGa > 2:5303512/1‑93 (MQ=255)
ccGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGa < 2:747602/93‑1 (MQ=255)
ccGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGa > 1:4643658/1‑93 (MQ=255)
ccGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGa > 1:3915640/1‑93 (MQ=255)
ccGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGa > 1:6043373/1‑93 (MQ=255)
ccGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGa > 2:1114546/1‑93 (MQ=255)
ccGGGTTCAGCACCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGa < 2:4568697/93‑1 (MQ=255)
gggTTCAGCGGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGata < 2:2945066/93‑1 (MQ=255)
ggTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGatat > 1:343923/1‑93 (MQ=255)
ggTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGatat > 1:3327039/1‑93 (MQ=255)
gTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATc < 1:2094613/93‑1 (MQ=255)
gTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATc < 2:4279516/93‑1 (MQ=255)
ttCAGCAGCCCCGCCGCCGCTGCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATca < 2:1884417/93‑1 (MQ=255)
tCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATcag > 2:459930/1‑93 (MQ=255)
cagcagCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATcagc < 2:2024235/93‑1 (MQ=255)
gcagcCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATcagcca < 1:1134777/93‑1 (MQ=255)
ccccGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCagcga < 2:1471821/93‑1 (MQ=255)
ccgccgccgCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCagcgagc > 1:3615347/1‑93 (MQ=255)
ccgccgccgCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCagcgagc > 1:6575446/1‑93 (MQ=255)
ccgccgccgCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCagcgagc > 2:2602090/1‑93 (MQ=255)
cgccgcTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTcc > 1:2637955/1‑93 (MQ=255)
gccgCTTCAATCATCGGCAGGCCGTTTTCGCTTGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTacc > 1:615336/1‑93 (MQ=255)
gccgCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTtcc > 1:1397483/1‑93 (MQ=255)
gccgCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTccc > 2:4884735/1‑93 (MQ=255)
ccgCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCa > 2:6092744/1‑93 (MQ=255)
|
GCTCGCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGTTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCA > NC_000913/2656511‑2656690
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGCTCGCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGTTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCATCAG > NC_000913/2656509‑2656694
|
CAGCTCGCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCT < SRR4302547.2723532/94‑1 (MQ=60)
CAGCTCGCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCT > SRR4302547.5762309/1‑94 (MQ=60)
CAGCTCGCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCT > SRR4302547.1204101/1‑94 (MQ=60)
AGCTCGCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTT > SRR4302547.3724943/1‑94 (MQ=60)
TCGCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAA < SRR4302547.1726479/94‑1 (MQ=60)
TCGCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAA < SRR4302547.4546504/94‑1 (MQ=60)
TCGCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAA < SRR4302547.5082020/94‑1 (MQ=60)
GCCTGCCAGGGCTTCAGTTGCCCGCGTCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATC < SRR4302547.5470510/94‑1 (MQ=60)
GCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATC > SRR4302547.4900074/1‑94 (MQ=60)
GCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATC > SRR4302547.2225373/1‑94 (MQ=60)
CCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCA < SRR4302547.1337556/94‑1 (MQ=60)
CCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCA > SRR4302547.3830196/1‑94 (MQ=60)
CTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCAT < SRR4302547.5495422/94‑1 (MQ=60)
TGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATC < SRR4302547.5365180/94‑1 (MQ=60)
GCCAGGTCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTGCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCG < SRR4302547.5588850/94‑1 (MQ=60)
GCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCT < SRR4302547.3505886/94‑1 (MQ=60)
GCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCG < SRR4302547.2982218/94‑1 (MQ=60)
GCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCA < SRR4302547.956408/94‑1 (MQ=60)
CCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGGCCCGCCGCCGCTTCAATCATCGG > SRR4302547.1875644/1‑94 (MQ=60)
CCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGG > SRR4302547.1847154/1‑94 (MQ=60)
CCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGG < SRR4302547.4153993/94‑1 (MQ=60)
CCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGG > SRR4302547.3218928/1‑94 (MQ=60)
CCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGG < SRR4302547.788260/94‑1 (MQ=60)
CCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGG < SRR4302547.1492874/94‑1 (MQ=60)
CCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGG < SRR4302547.748500/94‑1 (MQ=60)
AGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGGA > SRR4302547.6573151/1‑94 (MQ=60)
AGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCA < SRR4302547.5531062/94‑1 (MQ=60)
AGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCA > SRR4302547.1226841/1‑94 (MQ=60)
AGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCA < SRR4302547.3977675/94‑1 (MQ=60)
GGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAG < SRR4302547.4231568/94‑1 (MQ=60)
GGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAG > SRR4302547.1876864/1‑94 (MQ=60)
GCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGC > SRR4302547.4101247/1‑94 (MQ=60)
GCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGC > SRR4302547.79889/1‑94 (MQ=60)
GCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGC < SRR4302547.6746009/94‑1 (MQ=60)
TTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCG > SRR4302547.2193581/1‑94 (MQ=60)
TTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCG < SRR4302547.6528883/94‑1 (MQ=60)
TTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCG > SRR4302547.5358822/1‑94 (MQ=60)
TCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGT < SRR4302547.2582004/94‑1 (MQ=60)
AGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTT > SRR4302547.712486/1‑94 (MQ=60)
AGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTT > SRR4302547.5726473/1‑94 (MQ=60)
AGTTGCCCGCGCCACCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTT < SRR4302547.5513049/94‑1 (MQ=60)
GTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTT < SRR4302547.5468257/94‑1 (MQ=60)
GTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTT > SRR4302547.6323843/1‑94 (MQ=60)
TTGCCCGCGCCGCCAGTGCTTTGAGGATGTCAGCAGAAAGGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTC < SRR4302547.5514624/94‑1 (MQ=60)
CCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCT < SRR4302547.94063/94‑1 (MQ=60)
CCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCT > SRR4302547.6323374/1‑94 (MQ=60)
CCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCCCT > SRR4302547.2167324/1‑94 (MQ=60)
CCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTG > SRR4302547.4298764/1‑94 (MQ=60)
CCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTG < SRR4302547.4054107/94‑1 (MQ=60)
CGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGG < SRR4302547.5745187/94‑1 (MQ=60)
CGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGG < SRR4302547.1900002/94‑1 (MQ=60)
GCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGC < SRR4302547.203763/94‑1 (MQ=60)
CGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCC > SRR4302547.1753185/1‑94 (MQ=60)
CGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCC < SRR4302547.5003697/94‑1 (MQ=60)
CGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCCCTGGCC > SRR4302547.6505790/1‑94 (MQ=60)
GCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCT < SRR4302547.543447/94‑1 (MQ=60)
GCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCT > SRR4302547.4998267/1‑94 (MQ=60)
CCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACGGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTG < SRR4302547.449965/94‑1 (MQ=60)
CCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCTTTTTCGCTGGCCTG < SRR4302547.6516336/94‑1 (MQ=60)
CCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTG > SRR4302547.1049691/1‑94 (MQ=60)
CGCTAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGG < SRR4302547.1940974/94‑1 (MQ=60)
CGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGG > SRR4302547.3616749/1‑94 (MQ=60)
CGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGG > SRR4302547.2706665/1‑94 (MQ=60)
CGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGG < SRR4302547.1875637/94‑1 (MQ=60)
GCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGA > SRR4302547.5760805/1‑94 (MQ=60)
CCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAA > SRR4302547.2383827/1‑94 (MQ=60)
CAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAAT < SRR4302547.3076669/94‑1 (MQ=60)
AGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATT > SRR4302547.1178809/1‑94 (MQ=60)
AGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATT > SRR4302547.3186335/1‑94 (MQ=60)
AGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTGCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATT < SRR4302547.6136266/94‑1 (MQ=60)
TGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGA < SRR4302547.6385551/94‑1 (MQ=60)
TGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGA < SRR4302547.6283554/94‑1 (MQ=60)
GCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGAT > SRR4302547.732119/1‑94 (MQ=60)
GCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGAT < SRR4302547.6216269/94‑1 (MQ=60)
CTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATA > SRR4302547.4898732/1‑94 (MQ=60)
CTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATA > SRR4302547.300676/1‑94 (MQ=60)
CTTTGAGGATGTCCGCAGAAACGCGCACCGCGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATA > SRR4302547.711876/1‑94 (MQ=60)
TTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAA < SRR4302547.5323930/94‑1 (MQ=60)
TTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAG < SRR4302547.1370268/94‑1 (MQ=60)
TTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAG > SRR4302547.1309413/1‑94 (MQ=60)
TTGAGGATGTCCGCAGAAACGCGCACCGGATTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAG < SRR4302547.3348336/94‑1 (MQ=60)
TTGAGGATGAGCGCAGAAACGGGCACCGGGTTCAGCGGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAG < SRR4302547.6177558/94‑1 (MQ=60)
TGAGGATGTCCGTAGAAACGCCCCCCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGG < SRR4302547.706998/94‑1 (MQ=60)
TGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGG < SRR4302547.1282965/94‑1 (MQ=60)
TGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGG > SRR4302547.5809667/1‑94 (MQ=60)
GAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGC > SRR4302547.6280466/1‑94 (MQ=60)
AGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCA < SRR4302547.6717001/94‑1 (MQ=60)
AGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCA < SRR4302547.2945465/94‑1 (MQ=60)
GGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAG > SRR4302547.2545994/1‑94 (MQ=60)
GATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGA > SRR4302547.6702254/1‑94 (MQ=60)
ATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGAT > SRR4302547.6158465/1‑94 (MQ=60)
TGTCCGCAGAACCGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATG < SRR4302547.1208429/94‑1 (MQ=60)
TGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATG < SRR4302547.7004/94‑1 (MQ=60)
TGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATG > SRR4302547.5547092/1‑94 (MQ=60)
TGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATG < SRR4302547.843073/94‑1 (MQ=60)
GTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAATGCAGATGC > SRR4302547.36076/1‑94 (MQ=60)
GTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGC > SRR4302547.6109398/1‑94 (MQ=60)
TCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCG > SRR4302547.4199771/1‑94 (MQ=60)
TCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCG < SRR4302547.4580262/94‑1 (MQ=60)
CCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGG < SRR4302547.5964232/94‑1 (MQ=60)
GCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGAT > SRR4302547.2180292/1‑94 (MQ=60)
GCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGAT < SRR4302547.2290753/94‑1 (MQ=60)
CAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATA < SRR4302547.4179115/94‑1 (MQ=60)
AGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAG < SRR4302547.3977925/94‑1 (MQ=60)
AGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAG > SRR4302547.3435943/1‑94 (MQ=60)
AAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCG < SRR4302547.3666569/94‑1 (MQ=60)
AAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCG > SRR4302547.4152978/1‑94 (MQ=60)
AACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGT < SRR4302547.323700/94‑1 (MQ=60)
ACGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTT < SRR4302547.3769335/94‑1 (MQ=60)
CGCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTG < SRR4302547.3805199/94‑1 (MQ=60)
GCGCACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGC > SRR4302547.3596243/1‑94 (MQ=60)
CACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGG > SRR4302547.2893881/1‑94 (MQ=60)
CCCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGA < SRR4302547.1070474/94‑1 (MQ=60)
ACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGA > SRR4302547.4496502/1‑94 (MQ=60)
ACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGA > SRR4302547.4739834/1‑94 (MQ=60)
ACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGA > SRR4302547.3995256/1‑94 (MQ=60)
ACCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGA > SRR4302547.6168763/1‑94 (MQ=60)
CCGGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGAT < SRR4302547.2506282/94‑1 (MQ=60)
CCGGGTTCAGCAGCCCCGCCGCCGATTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGGTGCTGGAT > SRR4302547.4158551/1‑94 (MQ=60)
GGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATAT > SRR4302547.3394279/1‑94 (MQ=60)
GGGTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATAT > SRR4302547.350310/1‑94 (MQ=60)
GTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCA > SRR4302547.474392/1‑94 (MQ=60)
GTTCAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCA < SRR4302547.2136366/94‑1 (MQ=60)
CAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCC > SRR4302547.3969593/1‑94 (MQ=60)
CAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCC < SRR4302547.4766812/94‑1 (MQ=60)
CAGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCC > SRR4302547.4530456/1‑94 (MQ=60)
AGCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCA > SRR4302547.68882/1‑94 (MQ=60)
GCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAG < SRR4302547.1486879/94‑1 (MQ=60)
GCAGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAG < SRR4302547.1157696/94‑1 (MQ=60)
AGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCG < SRR4302547.4721261/94‑1 (MQ=60)
AGCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCG > SRR4302547.71934/1‑94 (MQ=60)
GCCCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGA < SRR4302547.3364315/94‑1 (MQ=60)
CCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTTGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGTCAGCGCGC > SRR4302547.1863990/1‑94 (MQ=60)
CCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGC < SRR4302547.5595990/94‑1 (MQ=60)
CCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGC > SRR4302547.1870938/1‑94 (MQ=60)
CCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGC > SRR4302547.3689105/1‑94 (MQ=60)
CCCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGC > SRR4302547.6712345/1‑94 (MQ=60)
CCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCG > SRR4302547.6793445/1‑94 (MQ=60)
CCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCG < SRR4302547.5328121/94‑1 (MQ=60)
CCGCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCG < SRR4302547.6159584/94‑1 (MQ=60)
GCCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTC < SRR4302547.6255685/94‑1 (MQ=60)
CCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCC > SRR4302547.2691063/1‑94 (MQ=60)
CCGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCC > SRR4302547.2399395/1‑94 (MQ=60)
GGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTTGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTACC > SRR4302547.626733/1‑94 (MQ=60)
CGCCGCTTCCATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCC > SRR4302547.6631682/1‑94 (MQ=60)
CGCCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTTCC > SRR4302547.1425440/1‑94 (MQ=60)
CCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCAT < SRR4302547.3343520/94‑1 (MQ=60)
CCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCAT > SRR4302547.6387224/1‑94 (MQ=60)
CCGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCAT > SRR4302547.2441335/1‑94 (MQ=60)
CGCTTCAATCATCGGCAGGCCGTTTTCGGTGGCCTGGTATTGATAAGGCAGATGCGGATAGCGGTGCTGGATATCAGCCAGCGAGCGTCCCATC > SRR4302547.2651587/1‑94 (MQ=60)
CGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCATC > SRR4302547.6356454/1‑94 (MQ=60)
CGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCATC > SRR4302547.1164521/1‑94 (MQ=60)
CGCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCATC > SRR4302547.3983717/1‑94 (MQ=60)
GCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCATCA < SRR4302547.4803155/94‑1 (MQ=60)
GCTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCATCA < SRR4302547.3132317/94‑1 (MQ=60)
CTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCATCAG > SRR4302547.2548457/1‑94 (MQ=60)
CTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCATCAG > SRR4302547.6356904/1‑94 (MQ=60)
CTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCATCAG > SRR4302547.5446015/1‑94 (MQ=60)
CTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCATCAG < SRR4302547.403400/94‑1 (MQ=60)
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CAGCTCGCCTGCCAGGGCTTCAGTTGCCCGCGCCGCCAGTGCTTTGAGGATGTCCGCAGAAACGCGCACCGGGTTCAGCAGCCCCGCCGCCGTTTCAATCATCGGCAGGCCGTTTTCGCTGGCCTGGAATTGATAAGGCAGATGCGGATAGCGTTGCTGGATATCAGCCAGCGAGCGTCCCATCAG > NC_000913/2656509‑2656694
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |