Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
2,875,936 |
Δ61 bp |
intergenic (+295/+596) |
iap → / ← ygbF |
Iap/hypothetical protein |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
2875936 |
2875996 |
61 |
178 [1] |
[0] 178 |
iap/ygbF |
Iap/hypothetical protein |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 2875935 | 1 (0.000) | 108 (0.630) |
65/122 |
2.1 |
99.7% |
intergenic (+294/+657) |
iap/ygbF |
Iap/hypothetical protein |
| ? | NC_000913 |
2875997 = |
0 (0.000) | intergenic (+356/+595) |
iap/ygbF |
Iap/hypothetical protein |
GATK/CNVnator alignment
N/A
