Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,964,753 |
T→C |
A568A (GCA→GCG) |
ptsP ← |
PtsP |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,964,753 | 0 | T | C | 85.8%
| 685.4
/ 96.0
| 267 | A568A (GCA→GCG) | ptsP | PtsP |
| Reads supporting (aligned to +/- strand): ref base T (24/14); new base C (125/104); total (149/118) |
| Fisher's exact test for biased strand distribution p-value = 3.80e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 |
Only 100 of 276 total aligned reads displayed.
CACTTCCAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCGCA > NC_000913/2964663‑2964841
|
cACTTCCAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGc > 2:4471085/1‑93 (MQ=255)
ttCCAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTtc < 1:4385530/93‑1 (MQ=255)
tCCAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTtca > 2:3066523/1‑93 (MQ=255)
aGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTtcatca > 1:5352120/1‑93 (MQ=255)
aGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACATTCAATCAGGCGGCGCGCTtcatca > 2:6420170/1‑93 (MQ=255)
gCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCaa > 2:146756/1‑93 (MQ=255)
gCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCAGCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCaa > 2:4662276/1‑93 (MQ=255)
cATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAAc > 1:1728466/1‑93 (MQ=255)
cATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAAc < 2:3536257/93‑1 (MQ=255)
atgatgCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACt > 1:3651200/1‑93 (MQ=255)
gatgCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTc < 1:2324462/93‑1 (MQ=255)
atgCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCa < 2:4817722/93‑1 (MQ=255)
atgCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCa > 1:5367153/1‑93 (MQ=255)
tgCCGATACGTGGTTTGGGAATTTCGTACCCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCAt < 1:5807506/93‑1 (MQ=255)
tgCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCAt < 1:791665/93‑1 (MQ=255)
gCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATc > 2:1284649/1‑93 (MQ=255)
gCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATc < 1:2828202/93‑1 (MQ=255)
ccGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCg < 1:4785003/93‑1 (MQ=255)
ccGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCg > 2:2544128/1‑93 (MQ=255)
cGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGa > 1:1735332/1‑93 (MQ=255)
cGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGa < 1:3256418/93‑1 (MQ=255)
gATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAg < 1:5924573/93‑1 (MQ=255)
aTACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAgg > 1:3532943/1‑93 (MQ=255)
aCGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCTCTTCATCAACTTCATCGAGGCt < 1:4079790/93‑1 (MQ=255)
cGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCtt < 2:5914900/93‑1 (MQ=255)
tGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTtgt > 2:3700562/1‑93 (MQ=255)
tGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTtgt < 1:3285983/93‑1 (MQ=255)
gTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGa > 1:4012519/1‑93 (MQ=255)
gTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGa > 1:5764580/1‑93 (MQ=255)
tGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCa < 2:6260248/93‑1 (MQ=255)
gggAATTTCGTAACCGATCATCTCCTCGACTTCACGGCCGGCACGTTCAATCAGTGGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCAt > 2:4298519/1‑93 (MQ=255)
ggAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATc < 1:1628676/93‑1 (MQ=255)
gAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCg > 2:2896281/1‑93 (MQ=255)
gAATTTCGTAACCGATCAGCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCg < 1:1297268/93‑1 (MQ=255)
aaTTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCgg > 1:4616532/1‑93 (MQ=255)
aTTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGc < 2:5192598/93‑1 (MQ=255)
aTTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGc > 2:2297317/1‑93 (MQ=255)
tttCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCa < 1:2639624/93‑1 (MQ=255)
tCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAAc < 1:1170710/93‑1 (MQ=255)
tCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAAc < 1:1430493/93‑1 (MQ=255)
gTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAg < 2:204347/93‑1 (MQ=255)
tAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTTAACATCAGCCACAGa > 1:2508836/1‑93 (MQ=255)
tAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGa > 2:942747/1‑93 (MQ=255)
tAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGa > 1:6368310/1‑93 (MQ=255)
tAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGa < 2:6103291/93‑1 (MQ=255)
tAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGa < 2:5499849/93‑1 (MQ=255)
aCCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAat > 1:311866/1‑93 (MQ=255)
ccGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAata < 2:5881549/93‑1 (MQ=255)
gATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATAtt < 2:4548687/93‑1 (MQ=255)
gATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATAtt < 2:1706970/93‑1 (MQ=255)
tcatcTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCa < 1:5256894/93‑1 (MQ=255)
tcatcTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCa < 2:5749419/93‑1 (MQ=255)
catcTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAg < 1:5011048/93‑1 (MQ=255)
atcTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAgg < 2:4041728/93‑1 (MQ=255)
atcTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAgg > 2:3280585/1‑93 (MQ=255)
tctcCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGt > 1:3187101/1‑93 (MQ=255)
tctcCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGt < 1:6453103/93‑1 (MQ=255)
tctcCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGt > 1:62324/1‑93 (MQ=255)
tcctcGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTg > 2:3962684/1‑93 (MQ=255)
tcctcGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTg > 1:632214/1‑93 (MQ=255)
cctcGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGc > 1:1021868/1‑93 (MQ=255)
ctcGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGcc > 2:2260530/1‑93 (MQ=255)
ctcGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGcc > 2:3836698/1‑93 (MQ=255)
tcGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGccc > 1:6598613/1‑93 (MQ=255)
cGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCg < 2:3266069/93‑1 (MQ=255)
gACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGt > 2:1183232/1‑93 (MQ=255)
gACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGt < 1:5425490/93‑1 (MQ=255)
gACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGt > 1:1207129/1‑93 (MQ=255)
gcTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTa < 1:2261206/92‑1 (MQ=255)
aCTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTa < 1:505473/93‑1 (MQ=255)
aCTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTa > 2:3634957/1‑93 (MQ=255)
aCTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTa < 1:4292858/93‑1 (MQ=255)
aCTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTa > 2:3753545/1‑93 (MQ=255)
cTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGGTGCCCGTAg > 2:1864031/1‑93 (MQ=255)
cTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAg > 1:465767/1‑93 (MQ=255)
ttCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGc > 2:3114166/1‑93 (MQ=255)
cACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCgg < 2:4391185/93‑1 (MQ=255)
tCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCAtt > 2:1794275/1‑93 (MQ=255)
cGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAg > 2:5081217/1‑93 (MQ=255)
ggCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGc > 1:2145664/1‑93 (MQ=255)
cACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCAc < 1:4902098/93‑1 (MQ=255)
aCGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACg < 2:2937740/93‑1 (MQ=255)
cGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACgc > 1:2727838/1‑93 (MQ=255)
cGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACgc < 1:2681970/93‑1 (MQ=255)
gTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACgcg > 1:142150/1‑92 (MQ=255)
gTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACgca < 2:4254370/93‑1 (MQ=255)
tCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACgcagc < 1:671968/93‑1 (MQ=255)
tCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACgcagc < 2:6031464/93‑1 (MQ=255)
tCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACgcagc > 2:2382409/1‑93 (MQ=255)
aaTCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCAt < 2:2105424/93‑1 (MQ=255)
aaTCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCAt > 2:5311679/1‑93 (MQ=255)
aaTCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCAt < 1:1868191/93‑1 (MQ=255)
aaTCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCAt > 2:2228216/1‑93 (MQ=255)
cAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGc < 1:6058710/93‑1 (MQ=255)
aGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGcc < 2:1988373/93‑1 (MQ=255)
aGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGcc < 2:6621288/93‑1 (MQ=255)
aGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGcc > 1:5533503/1‑93 (MQ=255)
ggcggcGCTCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGccc < 2:1026350/93‑1 (MQ=255)
ggcggcGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGccc > 2:4228824/1‑93 (MQ=255)
gcgacgCGCTTCATCAACTTCATCGAGGCTGGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCg < 1:1564918/93‑1 (MQ=255)
|
CACTTCCAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCGCA > NC_000913/2964663‑2964841
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGCACTTCCAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCGCACCTGG > NC_000913/2964660‑2964846
|
CGGCACTTCCAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGC > SRR4302547.2534105/1‑94 (MQ=60)
CACTTCCAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCT > SRR4302547.4875997/1‑94 (MQ=60)
CACTTCCAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCT > SRR4302547.3902549/1‑94 (MQ=60)
ACTTCCAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTT > SRR4302547.3315292/1‑94 (MQ=60)
CTTCCAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTC > SRR4302547.1239802/1‑94 (MQ=60)
TTCCAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCA < SRR4302547.1575936/94‑1 (MQ=60)
TTCCAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCA < SRR4302547.4475751/94‑1 (MQ=60)
TTCCAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATATCCTCGACTTCACGTCCGGCACGATCAATCAGGCGGCGAGCTTCA > SRR4302547.5473790/1‑94 (MQ=60)
TCCAGCATGATGCCGATACGTGGTTGGGAAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCAT < SRR4302547.1808322/94‑1 (MQ=60)
CAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTGAATCAGGCGGCGCGCTTCATCA > SRR4302547.4968439/1‑94 (MQ=60)
CAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCA > SRR4302547.2330167/1‑94 (MQ=60)
CAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCA > SRR4302547.5462485/1‑94 (MQ=60)
AGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGTTACGTTCAATCAGGCGGCGCGCTTCATCAA > SRR4302547.3343108/1‑94 (MQ=60)
GCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAAC < SRR4302547.4110688/94‑1 (MQ=60)
GCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAAC > SRR4302547.1762424/1‑94 (MQ=60)
CATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACT > SRR4302547.3725676/1‑94 (MQ=60)
CATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGGCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACT > SRR4302547.1766492/1‑94 (MQ=60)
TGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTC > SRR4302547.1212925/1‑94 (MQ=60)
GATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCA < SRR4302547.2371573/94‑1 (MQ=60)
GATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCA > SRR4302547.5477906/1‑94 (MQ=60)
GATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGCCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCT > SRR4302547.2122266/1‑94 (MQ=60)
TGCCGATACGTGGTTTGGGAATTTCGTACCCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATC < SRR4302547.5927649/94‑1 (MQ=60)
TGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATC < SRR4302547.806647/94‑1 (MQ=60)
TGCCGATACGTGGTTTGGGAATGTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATC < SRR4302547.2855544/94‑1 (MQ=60)
GCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCG < SRR4302547.2884759/94‑1 (MQ=60)
GCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCG > SRR4302547.3322089/1‑94 (MQ=60)
GCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCG < SRR4302547.545322/94‑1 (MQ=60)
CCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGA > SRR4302547.106088/1‑94 (MQ=60)
CCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGA < SRR4302547.4884112/94‑1 (MQ=60)
CCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGA > SRR4302547.1769423/1‑94 (MQ=60)
CGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAG < SRR4302547.3321491/94‑1 (MQ=60)
GATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGG < SRR4302547.6047369/94‑1 (MQ=60)
GATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGG > SRR4302547.5542191/1‑94 (MQ=60)
GATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGG > SRR4302547.3605084/1‑94 (MQ=60)
TACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCATGAGCCGCGCTTCATCAACTTCATCGAGGCT > SRR4302547.5488929/1‑94 (MQ=60)
TACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCT > SRR4302547.2683391/1‑94 (MQ=60)
ACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCTCTTCATCAACTTCATCGAGGCTT < SRR4302547.4162700/94‑1 (MQ=60)
ACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAGCTTCATCGAGGCTT < SRR4302547.5349276/94‑1 (MQ=60)
CGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTG < SRR4302547.3249585/94‑1 (MQ=60)
GTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGATTGT > SRR4302547.5146634/1‑94 (MQ=60)
TGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTG < SRR4302547.6539205/94‑1 (MQ=60)
TGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTG > SRR4302547.1347090/1‑94 (MQ=60)
TGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTG < SRR4302547.3351887/94‑1 (MQ=60)
GGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGA > SRR4302547.4094080/1‑94 (MQ=60)
GGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGA > SRR4302547.5883797/1‑94 (MQ=60)
GGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAAGCTTGTGA > SRR4302547.1904183/1‑94 (MQ=60)
GGTGTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGA < SRR4302547.5591700/94‑1 (MQ=60)
TTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACC > SRR4302547.2510728/1‑94 (MQ=60)
TTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACC > SRR4302547.4175483/1‑94 (MQ=60)
TTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACC < SRR4302547.1647860/94‑1 (MQ=60)
TTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACC < SRR4302547.2280235/94‑1 (MQ=60)
TTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCA > SRR4302547.1218692/1‑94 (MQ=60)
TGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCAT < SRR4302547.6457856/94‑1 (MQ=60)
GGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCG < SRR4302547.1660893/94‑1 (MQ=60)
GGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCG < SRR4302547.3511836/94‑1 (MQ=60)
GGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGATTGTGACCATCG < SRR4302547.4388797/94‑1 (MQ=60)
GAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGG > SRR4302547.4712125/1‑94 (MQ=60)
GAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGG > SRR4302547.6779418/1‑94 (MQ=60)
GAATTTCGTAACCGATCAGCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGG < SRR4302547.1323382/94‑1 (MQ=60)
ATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCA < SRR4302547.6584045/94‑1 (MQ=60)
ATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCA < SRR4302547.6738013/94‑1 (MQ=60)
TTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAA < SRR4302547.2692762/94‑1 (MQ=60)
TTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCCTCGGCAAC > SRR4302547.4858578/1‑94 (MQ=60)
TCGTAGCCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACA < SRR4302547.145311/94‑1 (MQ=60)
TCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACA < SRR4302547.1194374/94‑1 (MQ=60)
TCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACA < SRR4302547.1459100/94‑1 (MQ=60)
TCGTAACCGATCATCTCCTCGACTTCACCTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGGCCATCGGCAACA < SRR4302547.3515724/94‑1 (MQ=60)
CGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACCG > SRR4302547.1789308/1‑94 (MQ=60)
CGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAG > SRR4302547.4600734/1‑94 (MQ=60)
GTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGA > SRR4302547.3878942/1‑94 (MQ=60)
GTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTTAACATCAGCCACAGA > SRR4302547.2559558/1‑94 (MQ=60)
GTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGA > SRR4302547.6501174/1‑94 (MQ=60)
AACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAAT > SRR4302547.317674/1‑94 (MQ=60)
AACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAAT < SRR4302547.4975599/94‑1 (MQ=60)
AACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAAT > SRR4302547.5455122/1‑94 (MQ=60)
GATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTC > SRR4302547.73895/1‑94 (MQ=60)
GATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTC < SRR4302547.2273490/94‑1 (MQ=60)
ATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCA > SRR4302547.783336/1‑94 (MQ=60)
ATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCA < SRR4302547.4255344/94‑1 (MQ=60)
TCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAG < SRR4302547.5365136/94‑1 (MQ=60)
TCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAG < SRR4302547.6351218/94‑1 (MQ=60)
CATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGG < SRR4302547.5114644/94‑1 (MQ=60)
CATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGG < SRR4302547.1751445/94‑1 (MQ=60)
CATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGG > SRR4302547.4697031/1‑94 (MQ=60)
CATCTCCTCGACTTCACGTCAGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTTTGACCATCGGCAACAGAATATTCAGG > SRR4302547.6594807/1‑94 (MQ=60)
ATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGT > SRR4302547.3250608/1‑94 (MQ=60)
ATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGT > SRR4302547.3614696/1‑94 (MQ=60)
ATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGT > SRR4302547.63498/1‑94 (MQ=60)
TCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTT < SRR4302547.6587526/94‑1 (MQ=60)
CTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTG > SRR4302547.643891/1‑94 (MQ=60)
CTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTG > SRR4302547.2537927/1‑94 (MQ=60)
CTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTG > SRR4302547.6450893/1‑94 (MQ=60)
TCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGC > SRR4302547.1041906/1‑94 (MQ=60)
CTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCC > SRR4302547.6735978/1‑94 (MQ=60)
CGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGT > SRR4302547.589509/1‑94 (MQ=60)
CGACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGT > SRR4302547.1231493/1‑94 (MQ=60)
GACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTA > SRR4302547.6068049/1‑94 (MQ=60)
GACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTA > SRR4302547.5880725/1‑94 (MQ=60)
GACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTA < SRR4302547.5537690/94‑1 (MQ=60)
GACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTA > SRR4302547.2702179/1‑94 (MQ=60)
GACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAAAATATTCAGGTTGCCCGTA > SRR4302547.1746075/1‑94 (MQ=60)
GCTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAT < SRR4302547.2306894/94‑1 (MQ=60)
ACTTCGCGGCCGGCACGTTCAAGCAGGCGGCGCGCTTCAGCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAG < SRR4302547.5079956/94‑1 (MQ=60)
ACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAG < SRR4302547.1384809/94‑1 (MQ=60)
ACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAG > SRR4302547.474350/1‑94 (MQ=60)
ACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAG < SRR4302547.4381101/94‑1 (MQ=60)
ACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAG < SRR4302547.514657/94‑1 (MQ=60)
ACTTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGGTGCCCGGAG > SRR4302547.5298423/1‑94 (MQ=60)
TTCACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCG < SRR4302547.605090/94‑1 (MQ=60)
CACGTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGC < SRR4302547.2664507/94‑1 (MQ=60)
GTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATT < SRR4302547.2797368/94‑1 (MQ=60)
GTCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATT < SRR4302547.2770652/94‑1 (MQ=60)
TCCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGGTGCCCGTAGCGGCATTA > SRR4302547.1540339/1‑94 (MQ=60)
CCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAG > SRR4302547.1655426/1‑94 (MQ=60)
CCGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAG > SRR4302547.1252335/1‑94 (MQ=60)
CGGCACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGC > SRR4302547.2188466/1‑94 (MQ=60)
CACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACG > SRR4302547.6014146/1‑94 (MQ=60)
CACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACG < SRR4302547.5003609/94‑1 (MQ=60)
ACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGC > SRR4302547.2782603/1‑94 (MQ=60)
ACGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGC > SRR4302547.590841/1‑94 (MQ=60)
CGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCG > SRR4302547.144717/1‑94 (MQ=60)
CGTTCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCA < SRR4302547.2735826/94‑1 (MQ=60)
TCAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCA < SRR4302547.684339/94‑1 (MQ=60)
CAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCAT > SRR4302547.209553/1‑94 (MQ=60)
CAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCAT > SRR4302547.622215/1‑94 (MQ=60)
CAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCAT < SRR4302547.925897/94‑1 (MQ=60)
CAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCAT > SRR4302547.5768198/1‑94 (MQ=60)
CAATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGATGCCCGTAGCGGCATTAGCACACAGCAT > SRR4302547.4604268/1‑94 (MQ=60)
AATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATC > SRR4302547.308860/1‑94 (MQ=60)
AATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATC < SRR4302547.1905084/94‑1 (MQ=60)
AATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATC < SRR4302547.6688264/94‑1 (MQ=60)
AATCAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATC > SRR4302547.4728149/1‑94 (MQ=60)
ATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCG > SRR4302547.2936526/1‑94 (MQ=60)
CAGGCGGCGTGCTTCATAAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAAGTTGCCCGTAGCGGCATTAGCAAGCAGCATCCCC > SRR4302547.3724812/1‑94 (MQ=60)
CAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCC < SRR4302547.6184394/94‑1 (MQ=60)
CAGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCC > SRR4302547.5647706/1‑94 (MQ=60)
AGGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCC > SRR4302547.2694640/1‑94 (MQ=60)
GGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCG < SRR4302547.5043752/94‑1 (MQ=60)
GGCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCG > SRR4302547.539152/1‑94 (MQ=60)
GCGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCGC < SRR4302547.3206026/94‑1 (MQ=60)
GCGACGCGCTTCATCAACTTCATCGAGGCTGGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCGC < SRR4302547.1596091/94‑1 (MQ=60)
CGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATTGCCCGCA > SRR4302547.4428767/1‑94 (MQ=60)
CGGCGCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCGCA > SRR4302547.6363161/1‑94 (MQ=60)
GCGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCGCACCTG > SRR4302547.2768375/1‑94 (MQ=60)
CGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCGCACCTGG > SRR4302547.6149834/1‑94 (MQ=60)
CGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCGCACCTGG > SRR4302547.3347254/1‑94 (MQ=60)
CGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCGCACCTGG < SRR4302547.6630715/94‑1 (MQ=60)
CGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCGCACCTGG < SRR4302547.5752766/94‑1 (MQ=60)
CGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCGCACCTGG < SRR4302547.2464953/94‑1 (MQ=60)
CGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCGCACCTGG < SRR4302547.89161/94‑1 (MQ=60)
CGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCGCACCTGG > SRR4302547.4854024/1‑94 (MQ=60)
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CGGCACTTCCAGCATGATGCCGATACGTGGTTTGGGAATTTCGTAACCGATCATCTCCTCGACTTCACGTCCGGCACGTTCAATCAGGCGGCGTGCTTCATCAACTTCATCGAGGCTTGTGACCATCGGCAACAGAATATTCAGGTTGCCCGTAGCGGCATTAGCACGCAGCATCGCCCGCACCTGG > NC_000913/2964660‑2964846
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
