Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	593	264.2	13311096	97.8%	13018251	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,442,615	A→G	P84P (CCT→CCC)	rpsE ←	30S ribosomal subunit protein S5

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,442,615	0	A	G	87.9%	825.9 / 91.7	298	P84P (CCT→CCC)	rpsE	30S ribosomal subunit protein S5
Reads supporting (aligned to +/- strand): ref base A (15/21); new base G (121/141); total (136/162)
Fisher's exact test for biased strand distribution p-value = 7.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.40e-01

Only 100 of 310 total aligned reads displayed.

AACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTCAC  >  NC_000913/3442525‑3442706

aaCGGCGCGCATTGCACCAGCGGCGATGATCCCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACggg                                                                                           <  2:6012710/93‑1 (MQ=255)

aaCGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACggg                                                                                           <  2:5053059/93‑1 (MQ=255)

 aCGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACgggg                                                                                          <  1:5343194/93‑1 (MQ=255)

  cGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGgt                                                                                         <  1:3116215/93‑1 (MQ=255)

     cgcgcATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGtt                                                                                      <  1:4361187/93‑1 (MQ=255)

       cgcATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGc                                                                                    <  1:242935/93‑1 (MQ=255)

         cATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCag                                                                                  <  1:456341/93‑1 (MQ=255)

         cATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCag                                                                                  >  1:2024032/1‑93 (MQ=255)

          aTTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCaga                                                                                 <  1:1025453/93‑1 (MQ=255)

           ttGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCagag                                                                                >  2:413769/1‑93 (MQ=255)

              caccacCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGc                                                                             >  2:3649899/1‑93 (MQ=255)

                ccaccGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCg                                                                           >  1:3821366/1‑93 (MQ=255)

                     ggCGATGGTACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTAtt                                                                      >  1:6538827/1‑93 (MQ=255)

                     ggCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTAtt                                                                      >  2:4783727/1‑93 (MQ=255)

                     ggCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTAtt                                                                      >  1:6613791/1‑93 (MQ=255)

                      gCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTc                                                                     >  1:2138258/1‑93 (MQ=255)

                      gCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTc                                                                     <  2:6389350/93‑1 (MQ=255)

                        gatgatACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAg                                                                   >  2:1580163/1‑93 (MQ=255)

                        gatgatACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAg                                                                   <  2:131009/93‑1 (MQ=255)

                         atgatACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAgc                                                                  >  2:1397773/1‑93 (MQ=255)

                         atgatACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAgc                                                                  >  1:1793150/1‑93 (MQ=255)

                         atgatACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAgc                                                                  <  2:1757855/93‑1 (MQ=255)

                         atgatACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAgc                                                                  >  1:6576305/1‑93 (MQ=255)

                          tgatACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAgcg                                                                 >  2:305203/1‑93 (MQ=255)

                          tgatACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAgcg                                                                 >  2:3034755/1‑93 (MQ=255)

                            atACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGcgcg                                                               >  1:4653048/1‑93 (MQ=255)

                            atACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGcgcg                                                               >  2:1694023/1‑93 (MQ=255)

                            atACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGcgcg                                                               >  1:4875274/1‑93 (MQ=255)

                             tACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGa                                                              <  2:2171957/93‑1 (MQ=255)

                              aCCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGAc                                                             <  1:588368/93‑1 (MQ=255)

                                cGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGt                                                           <  2:1184021/93‑1 (MQ=255)

                                   tACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTaa                                                        <  1:2574154/93‑1 (MQ=255)

                                    aCCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAAt                                                       >  1:3875282/1‑93 (MQ=255)

                                     ccTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATc                                                      <  1:3629710/93‑1 (MQ=255)

                                     ccTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGCGCCGTTATTCAGCGCGACGTTAATc                                                      >  2:3913968/1‑93 (MQ=255)

                                     ccTTCGGAACCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATc                                                      <  2:6156280/93‑1 (MQ=255)

                                        tCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCata                                                   >  1:4103605/1‑93 (MQ=255)

                                        tCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCata                                                   <  2:5380765/93‑1 (MQ=255)

                                        tCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCata                                                   <  1:1191670/93‑1 (MQ=255)

                                         cGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCatat                                                  >  2:5258525/1‑93 (MQ=255)

                                         cGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCatat                                                  <  1:98681/93‑1 (MQ=255)

                                         cGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCatat                                                  <  1:1567283/93‑1 (MQ=255)

                                         cGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCatat                                                  >  1:5946016/1‑93 (MQ=255)

                                          ggAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATAtt                                                 <  2:1366476/93‑1 (MQ=255)

                                           gAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTg                                                >  1:1325750/1‑93 (MQ=255)

                                             aGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCg                                              <  1:6349042/93‑1 (MQ=255)

                                             aGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCg                                              >  1:4006500/1‑93 (MQ=255)

                                              gCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGa                                             <  2:1139769/93‑1 (MQ=255)

                                              cccGACTGCATCAATACGCGAGAACCCGTGTGAACTCCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGGCGTTAATCATATTGCGa                                             <  1:2671151/92‑1 (MQ=255)

                                                cGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACg                                           <  2:5409956/93‑1 (MQ=255)

                                                 ggCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGCTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACgg                                          >  1:4754861/1‑93 (MQ=255)

                                                   cTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGc                                        <  1:1703470/93‑1 (MQ=255)

                                                     gCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCtt                                      <  2:3317312/93‑1 (MQ=255)

                                                     gCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCtt                                      <  2:3452723/93‑1 (MQ=255)

                                                      cATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCttt                                     >  1:6198911/1‑93 (MQ=255)

                                                      cATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCttt                                     <  1:3283933/93‑1 (MQ=255)

                                                       aTGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCtttt                                    >  1:5655327/1‑93 (MQ=255)

                                                       aTGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGGGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCtttt                                    >  1:3518118/1‑93 (MQ=255)

                                                        tGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCttttt                                   <  2:4706650/93‑1 (MQ=255)

                                                        tGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCttttt                                   >  1:2626969/1‑93 (MQ=255)

                                                           aTACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCa                                <  2:2465367/93‑1 (MQ=255)

                                                            tACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCAt                               <  1:828270/93‑1 (MQ=255)

                                                             aCGCGAGAGCCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATc                              <  1:548405/93‑1 (MQ=255)

                                                             aCGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATc                              >  2:4982764/1‑93 (MQ=255)

                                                             aCGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATc                              <  2:375349/93‑1 (MQ=255)

                                                             aCGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATc                              <  2:2219623/93‑1 (MQ=255)

                                                               gcgAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGc                            <  2:76621/93‑1 (MQ=255)

                                                                cgAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCt                           >  1:3764839/1‑93 (MQ=255)

                                                                cgAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCt                           <  1:4967737/93‑1 (MQ=255)

                                                                cgAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCt                           <  1:4486515/93‑1 (MQ=255)

                                                                 gagaACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCtt                          <  2:6396487/93‑1 (MQ=255)

                                                                 gagaACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCtt                          <  2:6621154/93‑1 (MQ=255)

                                                                  agaACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCttt                         <  2:5848174/93‑1 (MQ=255)

                                                                   gaACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTc                        <  2:631862/93‑1 (MQ=255)

                                                                   gaACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTc                        >  1:2779484/1‑93 (MQ=255)

                                                                   gaACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTc                        >  1:6402769/1‑93 (MQ=255)

                                                                     aCCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTg                      <  2:2734833/93‑1 (MQ=255)

                                                                     aCCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTg                      >  2:5281520/1‑93 (MQ=255)

                                                                     aCCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTg                      >  2:5085098/1‑93 (MQ=255)

                                                                      cccGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTgg                     >  2:1864385/1‑93 (MQ=255)

                                                                      cccGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTgg                     <  2:5326276/93‑1 (MQ=255)

                                                                       ccGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGa                    >  2:2370692/1‑93 (MQ=255)

                                                                        cGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGAt                   <  1:18569/93‑1 (MQ=255)

                                                                         gtgtGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATc                  <  2:4330074/93‑1 (MQ=255)

                                                                          tgtgAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCg                 >  1:1529074/1‑93 (MQ=255)

                                                                           gtgAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCgc                >  1:6125989/1‑93 (MQ=255)

                                                                            tgAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCgct               <  1:4160090/93‑1 (MQ=255)

                                                                              aaCACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCgctgc             >  2:3944804/1‑93 (MQ=255)

                                                                               acacCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCgctgct            <  2:3844603/93‑1 (MQ=255)

                                                                                cacCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGctgctg           >  2:6373213/1‑93 (MQ=255)

                                                                                 acCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTgg          >  2:2645505/1‑93 (MQ=255)

                                                                                   cTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGaa        >  2:6499666/1‑93 (MQ=255)

                                                                                   cTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGaa        <  1:5034460/93‑1 (MQ=255)

                                                                                   cTTTAACGGGGTGTTGCAGACTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGaa        <  2:4421195/93‑1 (MQ=255)

                                                                                    tttAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAAc       <  1:2972411/93‑1 (MQ=255)

                                                                                      tAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACtt     <  1:4211533/93‑1 (MQ=255)

                                                                                      tAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACtt     <  2:407733/93‑1 (MQ=255)

                                                                                       aaCGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTTGCACTTc    >  2:1075546/1‑93 (MQ=255)

                                                                                       aaCGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTc    >  1:1642389/1‑93 (MQ=255)

                                                                                         cAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTCAc  <  1:1503656/93‑1 (MQ=255)

AACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTCAC  >  NC_000913/3442525‑3442706

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTCACGC  >  NC_000913/3442523‑3442708

AGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGG                                                                                              >  SRR4302547.3808593/1‑94 (MQ=60)

AGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGG                                                                                              <  SRR4302547.6433888/94‑1 (MQ=60)

AGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGG                                                                                              <  SRR4302547.6433887/94‑1 (MQ=60)

AGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGG                                                                                              <  SRR4302547.5386690/94‑1 (MQ=60)

 GAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGG                                                                                             <  SRR4302547.4764086/94‑1 (MQ=60)

  AACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGG                                                                                            <  SRR4302547.626262/94‑1 (MQ=60)

   ACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGT                                                                                           <  SRR4302547.2802276/94‑1 (MQ=60)

   ACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGT                                                                                           <  SRR4302547.5453351/94‑1 (MQ=60)

    CGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTG                                                                                          <  SRR4302547.3177982/94‑1 (MQ=60)

    CGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTG                                                                                          <  SRR4302547.1512340/94‑1 (MQ=60)

    CGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTG                                                                                          <  SRR4302547.70707/94‑1 (MQ=60)

     GGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGT                                                                                         >  SRR4302547.474146/1‑94 (MQ=60)

     GGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGT                                                                                         >  SRR4302547.4595623/1‑94 (MQ=60)

     GGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGT                                                                                         <  SRR4302547.1725749/94‑1 (MQ=60)

     GGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGT                                                                                         <  SRR4302547.5808663/94‑1 (MQ=60)

      GCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTT                                                                                        <  SRR4302547.3438859/94‑1 (MQ=60)

       CGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTG                                                                                       <  SRR4302547.5548015/94‑1 (MQ=60)

       CGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTG                                                                                       <  SRR4302547.4450761/94‑1 (MQ=60)

       CGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGCGAACACCTTTAACGGGGTGTTG                                                                                       <  SRR4302547.1301022/94‑1 (MQ=60)

       CGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGACAACCCGTGTGCACACCTTTAACGGGGGGTTG                                                                                       >  SRR4302547.2610670/1‑94 (MQ=60)

         CGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCA                                                                                     >  SRR4302547.1655915/1‑94 (MQ=60)

         CGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCA                                                                                     <  SRR4302547.247475/94‑1 (MQ=60)

          GCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAG                                                                                    >  SRR4302547.2064340/1‑94 (MQ=60)

          GCAGTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAG                                                                                    <  SRR4302547.4872680/94‑1 (MQ=60)

           CATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGA                                                                                   <  SRR4302547.464789/94‑1 (MQ=60)

            ATTGCCCCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAG                                                                                  <  SRR4302547.9388/94‑1 (MQ=60)

            ATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAG                                                                                  <  SRR4302547.1045585/94‑1 (MQ=60)

             TTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGT                                                                                 <  SRR4302547.3695615/94‑1 (MQ=60)

              TGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTG                                                                                >  SRR4302547.881932/1‑94 (MQ=60)

                CACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCC                                                                              >  SRR4302547.113754/1‑94 (MQ=60)

                 ACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCG                                                                             >  SRR4302547.3899232/1‑94 (MQ=60)

                  CCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGT                                                                            <  SRR4302547.2642508/94‑1 (MQ=60)

                   CACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTT                                                                           >  SRR4302547.370670/1‑94 (MQ=60)

                   CACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTT                                                                           <  SRR4302547.4117018/94‑1 (MQ=60)

                    CCCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTA                                                                          <  SRR4302547.3636582/94‑1 (MQ=60)

                     CCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTAT                                                                         <  SRR4302547.3274877/94‑1 (MQ=60)

                      CGGCGATGGTACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATT                                                                        >  SRR4302547.6674898/1‑94 (MQ=60)

                      CGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATT                                                                        >  SRR4302547.6751455/1‑94 (MQ=60)

                      CGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATT                                                                        <  SRR4302547.2907216/94‑1 (MQ=60)

                      CGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATT                                                                        >  SRR4302547.78058/1‑94 (MQ=60)

                      CGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATT                                                                        <  SRR4302547.3128645/94‑1 (MQ=60)

                      CGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATT                                                                        <  SRR4302547.3861392/94‑1 (MQ=60)

                       GGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTC                                                                       >  SRR4302547.2019482/1‑94 (MQ=60)

                       GGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTC                                                                       >  SRR4302547.2180892/1‑94 (MQ=60)

                         CGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAG                                                                     <  SRR4302547.4312496/94‑1 (MQ=60)

                         CGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAG                                                                     <  SRR4302547.3536123/94‑1 (MQ=60)

                         CGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAG                                                                     >  SRR4302547.2725781/1‑94 (MQ=60)

                          GATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGC                                                                    >  SRR4302547.6713221/1‑94 (MQ=60)

                          GATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGC                                                                    >  SRR4302547.1828643/1‑94 (MQ=60)

                          GATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTATTGCAGAGTGCCGTTATTCAGC                                                                    <  SRR4302547.6026400/94‑1 (MQ=60)

                           ATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCG                                                                   <  SRR4302547.6456864/94‑1 (MQ=60)

                            TGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGC                                                                  >  SRR4302547.4712116/1‑94 (MQ=60)

                            TGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGC                                                                  >  SRR4302547.4112749/1‑94 (MQ=60)

                             GATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCG                                                                 >  SRR4302547.289733/1‑94 (MQ=60)

                             GATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCG                                                                 <  SRR4302547.4716114/94‑1 (MQ=60)

                             GATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCG                                                                 >  SRR4302547.4749419/1‑94 (MQ=60)

                             GATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCG                                                                 >  SRR4302547.4976289/1‑94 (MQ=60)

                             GATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCG                                                                 <  SRR4302547.441584/94‑1 (MQ=60)

                             GATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCG                                                                 <  SRR4302547.5639706/94‑1 (MQ=60)

                               TACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGAG                                                               >  SRR4302547.1554182/1‑94 (MQ=60)

                               TACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGAC                                                               >  SRR4302547.4948025/1‑94 (MQ=60)

                               TACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGAC                                                               <  SRR4302547.6741174/94‑1 (MQ=60)

                                ACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACG                                                              <  SRR4302547.1823213/94‑1 (MQ=60)

                                ACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACG                                                              <  SRR4302547.598999/94‑1 (MQ=60)

                                  CGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTT                                                            <  SRR4302547.1773625/94‑1 (MQ=60)

                                    GTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAA                                                          <  SRR4302547.4482928/94‑1 (MQ=60)

                                     TACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAAT                                                         >  SRR4302547.3954135/1‑94 (MQ=60)

                                     TACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAAT                                                         <  SRR4302547.2700691/94‑1 (MQ=60)

                                     TACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAAT                                                         <  SRR4302547.2626117/94‑1 (MQ=60)

                                     TACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAAT                                                         <  SRR4302547.604497/94‑1 (MQ=60)

                                       CCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCA                                                       <  SRR4302547.3703756/94‑1 (MQ=60)

                                       CCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCA                                                       <  SRR4302547.6099087/94‑1 (MQ=60)

                                        CTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGTGTGTTGCAGAGTGCCGTTATTCAGCGCGATGTTAATCAT                                                      <  SRR4302547.268935/94‑1 (MQ=60)

                                         TTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATA                                                     >  SRR4302547.4187030/1‑94 (MQ=60)

                                          TCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATAT                                                    <  SRR4302547.1215719/94‑1 (MQ=60)

                                          TCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATAT                                                    >  SRR4302547.6069314/1‑94 (MQ=60)

                                           CGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATT                                                   <  SRR4302547.1598491/94‑1 (MQ=60)

                                           CGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATT                                                   <  SRR4302547.100506/94‑1 (MQ=60)

                                           CGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATT                                                   >  SRR4302547.880089/1‑94 (MQ=60)

                                            GGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTG                                                  >  SRR4302547.1352396/1‑94 (MQ=60)

                                            GGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTG                                                  <  SRR4302547.6278106/94‑1 (MQ=60)

                                            GGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTG                                                  <  SRR4302547.1324916/94‑1 (MQ=60)

                                              AAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCG                                                >  SRR4302547.4087931/1‑94 (MQ=60)

                                               AGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGA                                               <  SRR4302547.6481328/94‑1 (MQ=60)

                                               AGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGA                                               >  SRR4302547.5056764/1‑94 (MQ=60)

                                               AGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGA                                               >  SRR4302547.1955251/1‑94 (MQ=60)

                                                cccgaCTGCATCAATACGCGAGAACCCGTGTGAACTCCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGGCGTTAATCATATTGCGAC                                              <  SRR4302547.2724814/89‑1 (MQ=60)

                                                GCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGAC                                              <  SRR4302547.376217/94‑1 (MQ=60)

                                                GCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGAC                                              <  SRR4302547.510917/94‑1 (MQ=60)

                                                 CCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACG                                             <  SRR4302547.2522404/94‑1 (MQ=60)

                                                  CGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGG                                            >  SRR4302547.5633044/1‑94 (MQ=60)

                                                  CGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGCTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGG                                            >  SRR4302547.4853389/1‑94 (MQ=60)

                                                  CGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGG                                            >  SRR4302547.1571682/1‑94 (MQ=60)

                                                   GGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCCTATTGCGACGGG                                           >  SRR4302547.5797577/1‑94 (MQ=60)

                                                   GGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGG                                           <  SRR4302547.4479940/94‑1 (MQ=60)

                                                   GGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGG                                           >  SRR4302547.1730064/1‑94 (MQ=60)

                                                    GCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGAGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATAATATTGCGAgcggc                                          >  SRR4302547.747977/1‑89 (MQ=60)

                                                     CTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCT                                         <  SRR4302547.1849979/94‑1 (MQ=60)

                                                     CTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCT                                         <  SRR4302547.1736978/94‑1 (MQ=60)

                                                      TGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTT                                        <  SRR4302547.5486204/94‑1 (MQ=60)

                                                      TGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTT                                        >  SRR4302547.2122553/1‑94 (MQ=60)

                                                      TGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTT                                        >  SRR4302547.2210488/1‑94 (MQ=60)

                                                      TGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTT                                        <  SRR4302547.3921538/94‑1 (MQ=60)

                                                       GCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTT                                       >  SRR4302547.6327612/1‑94 (MQ=60)

                                                       GCATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTT                                       <  SRR4302547.2087446/94‑1 (MQ=60)

                                                        CATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTT                                      >  SRR4302547.5772079/1‑94 (MQ=60)

                                                        CATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGGGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTT                                      >  SRR4302547.3589933/1‑94 (MQ=60)

                                                        CATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTT                                      <  SRR4302547.3349795/94‑1 (MQ=60)

                                                         ATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTT                                     >  SRR4302547.2027183/1‑94 (MQ=60)

                                                         ATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTT                                     <  SRR4302547.1832417/94‑1 (MQ=60)

                                                         ATGAATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTT                                     >  SRR4302547.2679883/1‑94 (MQ=60)

                                                         ATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTT                                     <  SRR4302547.6485155/94‑1 (MQ=60)

                                                         AGGAATACGCGAGAACCCGTGTGATCACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTT                                     <  SRR4302547.4995006/94‑1 (MQ=60)

                                                          TGAATACGCGAGAACCCGTGTGAACACCTTTAACGGTGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTC                                    <  SRR4302547.4422795/94‑1 (MQ=60)

                                                            AATACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCA                                  >  SRR4302547.6715142/1‑94 (MQ=60)

                                                              TACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATC                                >  SRR4302547.6537965/1‑94 (MQ=60)

                                                              TACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATC                                <  SRR4302547.844086/94‑1 (MQ=60)

                                                              TACGCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATC                                >  SRR4302547.5349579/1‑94 (MQ=60)

                                                               ACGCGAGAGCCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCG                               <  SRR4302547.558310/94‑1 (MQ=60)

                                                                 GCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTTAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCT                             >  SRR4302547.396408/1‑94 (MQ=60)

                                                                 GCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCT                             >  SRR4302547.3841629/1‑94 (MQ=60)

                                                                 GCGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCT                             <  SRR4302547.6514295/94‑1 (MQ=60)

                                                                  CGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTT                            <  SRR4302547.5070537/94‑1 (MQ=60)

                                                                  CGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTT                            <  SRR4302547.4187367/94‑1 (MQ=60)

                                                                  CGAGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTT                            <  SRR4302547.4579187/94‑1 (MQ=60)

                                                                    AGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTC                          >  SRR4302547.6536319/1‑94 (MQ=60)

                                                                    AGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTC                          <  SRR4302547.4531055/94‑1 (MQ=60)

                                                                    AGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTC                          >  SRR4302547.2835170/1‑94 (MQ=60)

                                                                    AGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTC                          >  SRR4302547.3134945/1‑94 (MQ=60)

                                                                    AGAACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGATTTC                          >  SRR4302547.6689735/1‑94 (MQ=60)

                                                                    AGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTC                          <  SRR4302547.533077/94‑1 (MQ=60)

                                                                     GAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCT                         >  SRR4302547.2393559/1‑94 (MQ=60)

                                                                       ACCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGG                       >  SRR4302547.4772923/1‑94 (MQ=60)

                                                                        CCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGA                      >  SRR4302547.1053162/1‑94 (MQ=60)

                                                                        CCCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGA                      <  SRR4302547.1521668/94‑1 (MQ=60)

                                                                         CCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGAT                     <  SRR4302547.5890981/94‑1 (MQ=60)

                                                                         CCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGAT                     >  SRR4302547.6187753/1‑94 (MQ=60)

                                                                         CCGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGAT                     >  SRR4302547.4000667/1‑94 (MQ=60)

                                                                          CGTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATC                    <  SRR4302547.18926/94‑1 (MQ=60)

                                                                          CGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATC                    <  SRR4302547.64204/94‑1 (MQ=60)

                                                                           GTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCG                   >  SRR4302547.1559509/1‑94 (MQ=60)

                                                                           GTGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCG                   <  SRR4302547.5137219/94‑1 (MQ=60)

                                                                            TGTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGC                  >  SRR4302547.6253067/1‑94 (MQ=60)

                                                                             GTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCTCT                 <  SRR4302547.4270824/94‑1 (MQ=60)

                                                                             GTGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCT                 <  SRR4302547.3903453/94‑1 (MQ=60)

                                                                              TGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTG                >  SRR4302547.2626444/1‑94 (MQ=60)

                                                                              TGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTG                <  SRR4302547.4244847/94‑1 (MQ=60)

                                                                              TGAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTG                <  SRR4302547.1571357/94‑1 (MQ=60)

                                                                              TGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTG                >  SRR4302547.4078715/1‑94 (MQ=60)

                                                                               GAACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGC               >  SRR4302547.164736/1‑94 (MQ=60)

                                                                                AACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCT              >  SRR4302547.3434212/1‑94 (MQ=60)

                                                                                 ACACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTG             <  SRR4302547.6572026/94‑1 (MQ=60)

                                                                                   ACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGA           <  SRR4302547.3289700/94‑1 (MQ=60)

                                                                                   ACCTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGA           <  SRR4302547.4281040/94‑1 (MQ=60)

                                                                                     CTTTAATGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAAC         >  SRR4302547.1538070/1‑94 (MQ=60)

                                                                                     CTTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAAC         <  SRR4302547.5138459/94‑1 (MQ=60)

                                                                                      TTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACT        >  SRR4302547.3841841/1‑94 (MQ=60)

                                                                                      TTTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACT        <  SRR4302547.3031564/94‑1 (MQ=60)

                                                                                       TTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTT       <  SRR4302547.4206046/94‑1 (MQ=60)

                                                                                       TTAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTT       <  SRR4302547.6704587/94‑1 (MQ=60)

                                                                                        TAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTC      >  SRR4302547.1674844/1‑94 (MQ=60)

                                                                                        TAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTC      >  SRR4302547.4607219/1‑94 (MQ=60)

                                                                                        TAACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTC      <  SRR4302547.4297485/94‑1 (MQ=60)

                                                                                         AACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTCA     >  SRR4302547.2314411/1‑94 (MQ=60)

                                                                                          ACGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTCAC    <  SRR4302547.5760917/94‑1 (MQ=60)

                                                                                           CGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTCACG   <  SRR4302547.5421076/94‑1 (MQ=60)

                                                                                           CGGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTCACG   <  SRR4302547.6088137/94‑1 (MQ=60)

                                                                                           CAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTCACG   <  SRR4302547.1533638/94‑1 (MQ=60)

                                                                                            GGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGTCGGGCTTTTTCCACCGCTTTCTCGATCGCTGCTGGAACTTCACGC  >  SRR4302547.4662742/1‑94 (MQ=60)

                                                                                            GGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTCACGC  >  SRR4302547.5891682/1‑94 (MQ=60)

                                                                                            GGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTCACGC  >  SRR4302547.3762399/1‑94 (MQ=60)

                                                                                            AGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTCACGC  >  SRR4302547.3361074/1‑94 (MQ=60)

AGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACCCGTGTGAACACCTTTAACAGGGTGTTGCAGAGTGCCGTTATTCAGCGCGACGTTAATCATATTGCGACGGGCTTTTTCCATCGCTTTCTGGATCGCTGCTGGAACTTCACGC  >  NC_000913/3442523‑3442708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`