Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,578,561 |
(A)9→8 |
intergenic (‑125/‑208) |
yhhX ← / → yhhY |
putative regulator/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,578,553 | 0 | A | . | 85.0%
| 818.9
/ 169.9
| 247 | intergenic (‑117/‑216) | yhhX/yhhY | putative regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (18/19); new base . (102/108); total (120/127) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.51e-01 |
Only 100 of 285 total aligned reads displayed.
TTTACACCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATC > NC_000913/3578462‑3578645
|
ttACACCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGGACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaa < 2:3560714/93‑1 (MQ=255)
ttACACCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaa > 2:4675985/1‑93 (MQ=255)
tACACCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaa < 1:1081834/93‑1 (MQ=255)
acacCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACTAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaa < 2:4789162/93‑1 (MQ=255)
cTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaaaaag < 1:2502019/93‑2 (MQ=255)
cTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaaaaag > 1:4302714/1‑92 (MQ=255)
cTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaaaaag > 2:2635016/1‑92 (MQ=255)
cTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaaaaag < 2:1922270/93‑2 (MQ=255)
ttAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaaaaagc < 2:1065193/93‑3 (MQ=255)
ttAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaaaaagc < 2:2915110/93‑3 (MQ=255)
tAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaaaaagcc < 1:870490/93‑4 (MQ=255)
aGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaaaaagcca > 1:3646435/1‑89 (MQ=255)
aGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCaaaaaaaagcca < 1:6545009/93‑5 (MQ=255)
gcgcAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAg < 2:5485865/93‑1 (MQ=255)
cgcAAAGCGCACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGc < 1:2232668/93‑1 (MQ=255)
gcAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAATGAAAGATC‑AAAAAAAAGCCAGCa > 1:4197774/1‑93 (MQ=255)
gcAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCa < 1:1959527/93‑1 (MQ=255)
aaGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCAccc < 1:1599283/93‑1 (MQ=255)
aaGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCAccc < 2:2299369/93‑1 (MQ=255)
aaGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCAccc > 2:749551/1‑93 (MQ=255)
aaGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCAccc > 2:3355357/1‑93 (MQ=255)
aaGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCAccc < 1:1241350/93‑1 (MQ=255)
aGCGGACGTGTTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCAccc < 2:963680/93‑1 (MQ=255)
aGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCg > 1:2888499/1‑93 (MQ=255)
aGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCg < 2:4066158/93‑1 (MQ=255)
aGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCg > 2:5349452/1‑93 (MQ=255)
ggACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCggct > 1:444403/1‑93 (MQ=255)
gTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCggctggct < 1:3438939/93‑1 (MQ=255)
gTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCggctggct > 2:5912697/1‑93 (MQ=255)
ggTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTaa > 1:4587773/1‑93 (MQ=255)
ggTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTaa < 2:6093342/93‑1 (MQ=255)
gTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAg < 2:4430959/93‑1 (MQ=255)
ttCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGt < 1:5867990/93‑1 (MQ=255)
cTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAAt > 1:1494678/1‑93 (MQ=255)
aCTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATAc > 1:514002/1‑93 (MQ=255)
aCTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATAc < 1:6287073/93‑1 (MQ=255)
aCTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGACAGCACCCGGCTGGCTAAGTAATAc > 2:2274950/1‑93 (MQ=255)
cTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACt < 1:318789/93‑1 (MQ=255)
gAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGa < 2:244076/93‑1 (MQ=255)
gTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAg < 2:1038481/93‑1 (MQ=255)
cgcATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCaa < 1:3032337/93‑1 (MQ=255)
cATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAAt > 1:1158583/1‑93 (MQ=255)
cATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAAtg > 2:420311/1‑93 (MQ=255)
aTAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAAtg < 1:5544416/93‑1 (MQ=255)
aTAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAAtgt > 2:5682791/1‑93 (MQ=255)
tAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAAtgt < 2:857222/93‑1 (MQ=255)
tAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAAtgtg > 2:6014100/1‑93 (MQ=255)
aaCGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGa < 2:3824895/93‑1 (MQ=255)
aaCGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGa < 2:6241690/93‑1 (MQ=255)
aCGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAg > 1:2357054/1‑93 (MQ=255)
gAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCa > 2:2992848/1‑93 (MQ=255)
aaCACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCaa > 2:5860102/1‑93 (MQ=255)
aaCACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCaa > 1:464132/1‑93 (MQ=255)
aaCACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCaa > 1:6890/1‑93 (MQ=255)
acacAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAAt > 2:4965795/1‑93 (MQ=255)
acaAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGt > 1:1827059/1‑93 (MQ=255)
aaGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCg > 2:1441707/1‑93 (MQ=255)
aGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGt > 2:4083366/1‑93 (MQ=255)
gCACTCTTGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTg < 1:1289774/93‑1 (MQ=255)
gCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTg > 2:1836070/1‑93 (MQ=255)
gCACTCACGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTg < 2:135854/93‑1 (MQ=255)
cACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTg < 1:2717238/93‑1 (MQ=255)
aCTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGc < 1:2166336/93‑1 (MQ=255)
aCTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCt > 1:6136610/1‑93 (MQ=255)
cTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCtt > 1:3324811/1‑93 (MQ=255)
cGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAg < 2:6634314/93‑1 (MQ=255)
tGGATAAATTGAGAACGAAAGATC‑AAAAAAAATCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGt < 2:2530194/93‑1 (MQ=255)
tGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGt < 2:1240036/93‑1 (MQ=255)
tGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGt > 1:5267262/1‑93 (MQ=255)
tGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGt > 2:6466633/1‑93 (MQ=255)
ggATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGt > 1:5664300/1‑93 (MQ=255)
ggATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGtt > 2:4152748/1‑93 (MQ=255)
gATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGttt > 1:4367359/1‑92 (MQ=255)
gATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTtc < 2:4302714/93‑1 (MQ=255)
tAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTtct > 2:3591500/1‑93 (MQ=255)
tAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTtctc < 1:1769087/93‑1 (MQ=255)
aaaTTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTtctc > 2:2378092/1‑93 (MQ=255)
aaaTTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTcc < 1:1685367/93‑1 (MQ=255)
aaTTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCcg > 2:1710864/1‑93 (MQ=255)
aTTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCcgc < 2:5806096/93‑1 (MQ=255)
aTTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCcgc > 1:4015303/1‑93 (MQ=255)
ttGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCcgcg > 1:3115529/1‑93 (MQ=255)
tGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGa > 2:2746873/1‑93 (MQ=255)
gagaACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGa > 2:209054/1‑93 (MQ=255)
gagaACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAg < 1:4495250/93‑1 (MQ=255)
gagaACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAg > 1:4814208/1‑93 (MQ=255)
gaACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAggg < 1:3765828/93‑1 (MQ=255)
aaCGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGt < 1:5739179/93‑1 (MQ=255)
aCGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTc < 2:5643004/93‑1 (MQ=255)
agAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATCCTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCt < 2:3211849/92‑1 (MQ=255)
gAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCtt < 2:4767427/93‑1 (MQ=255)
aaaGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCtt < 1:6504915/93‑1 (MQ=255)
aaaGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTc < 2:3484019/93‑1 (MQ=255)
aaGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTc < 1:5114357/93‑1 (MQ=255)
aaGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTcc < 2:2183876/93‑1 (MQ=255)
aaGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTcc < 2:6266700/93‑1 (MQ=255)
aaGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTcc < 2:3290370/93‑1 (MQ=255)
aaGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTcc > 2:3083152/1‑93 (MQ=255)
gATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCt > 2:5548451/1‑93 (MQ=255)
aaaaaaaaaGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATc > 1:2461111/1‑93 (MQ=255)
|
TTTACACCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATC > NC_000913/3578462‑3578645
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAA > NC_000913/3578468‑3578654
|
CCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAG > SRR4302547.4391213/1‑94 (MQ=60)
CCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAG > SRR4302547.5763549/1‑94 (MQ=60)
CCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAA < SRR4302547.2031391/94‑1 (MQ=60)
CCTTAGCCCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAG < SRR4302547.1246238/94‑1 (MQ=60)
TAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCA > SRR4302547.1134171/1‑94 (MQ=60)
TAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCA < SRR4302547.887179/94‑1 (MQ=60)
TAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCA > SRR4302547.3720807/1‑94 (MQ=60)
AGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAG < SRR4302547.701078/94‑1 (MQ=60)
AGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAG < SRR4302547.6681226/94‑1 (MQ=60)
AGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAG > SRR4302547.4752494/1‑94 (MQ=60)
AGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACAAAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAG < SRR4302547.4110121/94‑1 (MQ=60)
CGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAATGAAAGATC‑AAAAAAAAGCCAGCA > SRR4302547.4283378/1‑94 (MQ=60)
CGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCA < SRR4302547.1478442/94‑1 (MQ=60)
CGCAAAGCGCACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCA < SRR4302547.2277669/94‑1 (MQ=60)
GCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCAC > SRR4302547.2050397/1‑94 (MQ=60)
GCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCAC < SRR4302547.1998431/94‑1 (MQ=60)
CAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCAC > SRR4302547.1630577/1‑94 (MQ=60)
AAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCC > SRR4302547.2670445/1‑94 (MQ=60)
AAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCG < SRR4302547.1631014/94‑1 (MQ=60)
AAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCG > SRR4302547.2408746/1‑94 (MQ=60)
AAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCG > SRR4302547.2946118/1‑94 (MQ=60)
AAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCG < SRR4302547.1266413/94‑1 (MQ=60)
CGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCT > SRR4302547.452679/1‑94 (MQ=60)
GGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTG > SRR4302547.5255468/1‑94 (MQ=60)
GGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTG < SRR4302547.1698575/94‑1 (MQ=60)
GTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTA < SRR4302547.3509058/94‑1 (MQ=60)
GTGGTCCCTACTGGAGTGCGCATAACGAACGCAAGCACTCCGGTGGATAAATAGAGAACAAAAGATC‑AAAAAAAAGCGAGCACCCGGCTCGCTA < SRR4302547.3586358/94‑1 (MQ=59)
TGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCCCCCGGCTGGCTAA < SRR4302547.3111910/94‑1 (MQ=60)
TGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAA > SRR4302547.4682730/1‑94 (MQ=60)
GGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAG > SRR4302547.5969954/1‑94 (MQ=60)
GGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAG < SRR4302547.3274544/94‑1 (MQ=60)
TTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTA < SRR4302547.2226486/94‑1 (MQ=60)
TTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTA < SRR4302547.5989439/94‑1 (MQ=60)
TCGTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAA > SRR4302547.1779803/1‑94 (MQ=60)
CCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAAT > SRR4302547.1524492/1‑94 (MQ=60)
TACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATAC > SRR4302547.523332/1‑94 (MQ=60)
ACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACT < SRR4302547.6417710/94‑1 (MQ=60)
CTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTG > SRR4302547.1931848/1‑94 (MQ=60)
CTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTG < SRR4302547.324719/94‑1 (MQ=60)
CTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTG < SRR4302547.129992/94‑1 (MQ=60)
CTGGAGTGAGCATACCGAGCACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATTCTG < SRR4302547.2308456/94‑1 (MQ=60)
TGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGG > SRR4302547.2889145/1‑94 (MQ=60)
GAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAA > SRR4302547.6663882/1‑94 (MQ=60)
AGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAG > SRR4302547.4538472/1‑94 (MQ=60)
AGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAG < SRR4302547.903472/94‑1 (MQ=60)
GTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGC > SRR4302547.6554076/1‑94 (MQ=60)
GTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGC > SRR4302547.6649185/1‑94 (MQ=60)
CGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAAT < SRR4302547.4092883/94‑1 (MQ=60)
CGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAAT < SRR4302547.435621/94‑1 (MQ=60)
CGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAAT < SRR4302547.3092638/94‑1 (MQ=60)
GCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAAT > SRR4302547.1182019/1‑94 (MQ=60)
CATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGT < SRR4302547.4335027/94‑1 (MQ=60)
ATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGT < SRR4302547.5658825/94‑1 (MQ=60)
ATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTG > SRR4302547.3178866/1‑94 (MQ=60)
ATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTG > SRR4302547.1517719/1‑94 (MQ=60)
AACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAG < SRR4302547.1286260/94‑1 (MQ=60)
AACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAG > SRR4302547.2404816/1‑94 (MQ=60)
AACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAG > SRR4302547.4408491/1‑94 (MQ=60)
AACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAG < SRR4302547.1629880/94‑1 (MQ=60)
CGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGC > SRR4302547.3465113/1‑94 (MQ=60)
CGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCA > SRR4302547.3709556/1‑94 (MQ=60)
CGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCA < SRR4302547.2969024/94‑1 (MQ=60)
GAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAA > SRR4302547.7015/1‑94 (MQ=60)
GAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAA > SRR4302547.472695/1‑94 (MQ=60)
AACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAAT < SRR4302547.3132229/94‑1 (MQ=60)
CACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGT > SRR4302547.1863173/1‑94 (MQ=60)
ACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTC < SRR4302547.4506098/94‑1 (MQ=60)
GCACTCTTGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGC < SRR4302547.1315742/94‑1 (MQ=60)
CACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGC < SRR4302547.2771787/94‑1 (MQ=60)
CACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCT > SRR4302547.4616904/1‑94 (MQ=60)
CACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCT > SRR4302547.6263911/1‑94 (MQ=60)
CACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCT < SRR4302547.22168/94‑1 (MQ=60)
CCTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTT < SRR4302547.1840150/94‑1 (MQ=60)
ACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCT < SRR4302547.2209660/94‑1 (MQ=60)
ACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTT > SRR4302547.2358028/1‑94 (MQ=60)
ACTCCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTT > SRR4302547.3391981/1‑94 (MQ=60)
CCCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCA > SRR4302547.5795334/1‑94 (MQ=60)
CCGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAG < SRR4302547.196397/94‑1 (MQ=60)
GGTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGG > SRR4302547.6771952/1‑94 (MQ=60)
CGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAG < SRR4302547.4622095/94‑1 (MQ=60)
GTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGT < SRR4302547.5496642/94‑1 (MQ=60)
GTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGT > SRR4302547.5375764/1‑94 (MQ=60)
GTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGT > SRR4302547.374197/1‑94 (MQ=60)
GTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGT < SRR4302547.4564035/94‑1 (MQ=60)
GTGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGT > SRR4302547.3822606/1‑94 (MQ=60)
TGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGT > SRR4302547.5781241/1‑94 (MQ=60)
TGGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTT < SRR4302547.4224665/94‑1 (MQ=60)
GGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTT > SRR4302547.4512117/1‑94 (MQ=60)
GGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTT > SRR4302547.4457055/1‑94 (MQ=60)
GGATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTC > SRR4302547.1667478/1‑94 (MQ=60)
GGATAAATTGAGAACGAAAGAGC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTC > SRR4302547.5522882/1‑94 (MQ=60)
GATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCT < SRR4302547.33405/94‑1 (MQ=60)
ATAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTC < SRR4302547.2774929/94‑1 (MQ=60)
TAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCC > SRR4302547.169324/1‑94 (MQ=60)
TAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCC < SRR4302547.1804168/94‑1 (MQ=60)
TAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCC < SRR4302547.1255307/94‑1 (MQ=60)
TAAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCC < SRR4302547.5145873/94‑1 (MQ=60)
AAATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCG < SRR4302547.1718535/94‑1 (MQ=60)
AATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCG > SRR4302547.3688621/1‑94 (MQ=60)
AATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGC > SRR4302547.5942556/1‑94 (MQ=60)
AATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGC > SRR4302547.4096905/1‑94 (MQ=60)
AATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGC > SRR4302547.5239699/1‑94 (MQ=60)
ATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCG > SRR4302547.3177283/1‑94 (MQ=60)
ATTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCG < SRR4302547.5802112/94‑1 (MQ=60)
TTGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGA > SRR4302547.5346360/1‑94 (MQ=60)
TGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGA > SRR4302547.6006895/1‑94 (MQ=60)
TGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAG > SRR4302547.4913981/1‑94 (MQ=60)
TGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAG < SRR4302547.6513020/94‑1 (MQ=60)
TGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAG > SRR4302547.3980486/1‑94 (MQ=60)
TGAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAG > SRR4302547.5685060/1‑94 (MQ=60)
GAGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGG < SRR4302547.4588093/94‑1 (MQ=60)
AGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGG < SRR4302547.6059040/94‑1 (MQ=60)
AGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGG > SRR4302547.251625/1‑94 (MQ=60)
AGAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCCAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGG > SRR4302547.4728761/1‑94 (MQ=60)
GAACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGT < SRR4302547.3842638/94‑1 (MQ=60)
AACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGT < SRR4302547.256359/94‑1 (MQ=60)
AACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTC > SRR4302547.3177908/1‑94 (MQ=60)
AACGAAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTC < SRR4302547.5857783/94‑1 (MQ=60)
AAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTC < SRR4302547.6640312/94‑1 (MQ=60)
AAAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCC < SRR4302547.761284/94‑1 (MQ=60)
AAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCC < SRR4302547.5219745/94‑1 (MQ=60)
AAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCT < SRR4302547.308800/94‑1 (MQ=60)
AAGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCT > SRR4302547.714752/1‑94 (MQ=60)
AGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTG < SRR4302547.472677/94‑1 (MQ=60)
AGATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTG < SRR4302547.5190381/94‑1 (MQ=60)
GATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGA < SRR4302547.2561650/94‑1 (MQ=60)
GATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGGTCTCCGCGAGGGgcttgctca > SRR4302547.5771555/1‑85 (MQ=60)
ATC‑AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGAT > SRR4302547.3435938/1‑94 (MQ=60)
acAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATC < SRR4302547.4571290/92‑1 (MQ=60)
CAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATC > SRR4302547.2510853/1‑94 (MQ=60)
CAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCG < SRR4302547.844573/94‑1 (MQ=60)
AAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGC > SRR4302547.3230945/1‑94 (MQ=60)
AAAAAAACCCAGCACCCGGCTGGCTAATAAATACTGGAAGCGATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGCGGCTTCCCGATCGCG > SRR4302547.3277988/1‑94 (MQ=60)
AAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAG < SRR4302547.3045930/94‑1 (MQ=60)
AAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAG < SRR4302547.4756455/94‑1 (MQ=60)
AAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAG < SRR4302547.4545405/94‑1 (MQ=60)
AAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGA > SRR4302547.1102859/1‑94 (MQ=60)
AAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGA < SRR4302547.4343927/94‑1 (MQ=60)
AAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACA < SRR4302547.1472482/94‑1 (MQ=60)
AAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACA > SRR4302547.5661774/1‑94 (MQ=60)
AAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACA > SRR4302547.2064153/1‑94 (MQ=60)
AAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACA > SRR4302547.469391/1‑94 (MQ=60)
AGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAA > SRR4302547.2650414/1‑94 (MQ=60)
AGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAA < SRR4302547.4684274/94‑1 (MQ=60)
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CCTTAGCGCAAAGCGGACGTGGTTCCTACTGGAGTGCGCATAACGAACACAAGCACTCCCGTGGATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAA > NC_000913/3578468‑3578654
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
