Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 593 264.2 13311096 97.8% 13018251 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,991,616 T→C E19E (GAA→GAG
F52L (TTC→CTC) 
cyaY ←
b3808 →
hypothetical protein
hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,991,6160TC86.0% 770.8 / 103.0 294E19E (GAA→GAG
F52L (TTC→CTC) 
cyaY
b3808
hypothetical protein
hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (19/22);  new base C (130/122);  total (150/144)
Fisher's exact test for biased strand distribution p-value = 6.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.00e-01

Only 100 of 311 total aligned reads displayed.

TGATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAGTATA  >  NC_000913/3991525‑3991708
                                                                                           |                                                                                            
 gATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGctc                                                                                            <  1:1018879/93‑1 (MQ=255)
 gATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGctc                                                                                            <  1:3366240/93‑1 (MQ=255)
 gATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGctc                                                                                            <  2:540356/93‑1 (MQ=255)
       gctgcCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAAt                                                                                      <  2:4610840/93‑1 (MQ=255)
         tgcCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCGCAGCCGCCCAGGCGCTCTTCATTgt                                                                                    >  2:6421668/1‑92 (MQ=255)
         tgcCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATgg                                                                                    <  2:1413438/93‑1 (MQ=255)
         tgcCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATgg                                                                                    >  1:1502507/1‑93 (MQ=255)
          gcCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGt                                                                                   <  2:5806154/93‑1 (MQ=255)
           ccATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTc                                                                                  <  1:433732/93‑1 (MQ=255)
           ccATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTc                                                                                  <  2:6184194/93‑1 (MQ=255)
           ccATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTc                                                                                  >  2:2058812/1‑93 (MQ=255)
           ccATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTc                                                                                  >  2:424363/1‑93 (MQ=255)
            cATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCa                                                                                 >  2:4301675/1‑93 (MQ=255)
             aTTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAg                                                                                >  1:1893276/1‑93 (MQ=255)
             aTTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAg                                                                                >  2:6142886/1‑93 (MQ=255)
             aTTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAg                                                                                >  1:295537/1‑93 (MQ=255)
              ttCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGc                                                                               <  1:4275088/93‑1 (MQ=255)
              ttCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGc                                                                               >  1:1675461/1‑93 (MQ=255)
               tctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGcc                                                                              <  1:3619669/93‑1 (MQ=255)
                 tcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCag                                                                            >  1:5264806/1‑93 (MQ=255)
                   aaaGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCagag                                                                          >  2:6625054/1‑93 (MQ=255)
                   aaaGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCagag                                                                          >  2:2840622/1‑93 (MQ=255)
                    aaGGTAATGGTCAGTACGCCGCCGTTGACTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGt                                                                         <  2:4460188/93‑1 (MQ=255)
                     aGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGtt                                                                        <  1:3789193/93‑1 (MQ=255)
                     aGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGtt                                                                        <  1:4420806/93‑1 (MQ=255)
                        tAATGGTCAGTACCCCGCCGTTGATTCCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGAt                                                                     <  2:5318563/93‑1 (MQ=255)
                          aTGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCa                                                                   >  2:480135/1‑93 (MQ=255)
                           tGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAg                                                                  >  1:5021463/1‑93 (MQ=255)
                           tGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAg                                                                  >  2:3996960/1‑93 (MQ=255)
                             gTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGcc                                                                >  2:1197361/1‑93 (MQ=255)
                             gTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGcc                                                                <  1:1819672/93‑1 (MQ=255)
                             gTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGcc                                                                <  2:3092014/93‑1 (MQ=255)
                             gTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGcc                                                                <  2:1728336/93‑1 (MQ=255)
                               cAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAg                                                              <  1:5393580/93‑1 (MQ=255)
                               cAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAg                                                              >  1:1236337/1‑93 (MQ=255)
                                aGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAgg                                                             <  1:3040297/93‑1 (MQ=255)
                                aGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAgg                                                             >  2:6243267/1‑93 (MQ=255)
                                 gTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGc                                                            >  1:4810186/1‑93 (MQ=255)
                                  tACGCCGCCGTTGATTTCGCCGTCGATATCGCTGTCGCCCTCCCAGTCGTCCAGGCGCTCTTCAATAGTCAGCCAGAGGTGATCAGCCCGGCg                                                           >  1:6152056/1‑93 (MQ=255)
                                  tACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGATCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCg                                                           >  2:6371467/1‑93 (MQ=255)
                                   aCGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGa                                                          <  2:4922388/93‑1 (MQ=255)
                                    cgccgcCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGAt                                                         >  2:1558139/1‑93 (MQ=255)
                                    cgccgcCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGAt                                                         <  1:268097/93‑1 (MQ=255)
                                     gccgccGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATg                                                        <  1:515839/93‑1 (MQ=255)
                                     gccgccGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATg                                                        <  1:1363330/93‑1 (MQ=255)
                                        gccgTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGaaa                                                     >  1:326799/1‑93 (MQ=255)
                                         ccgTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAAt                                                    >  1:5352612/1‑93 (MQ=255)
                                          cgTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAAtt                                                   >  1:4942995/1‑93 (MQ=255)
                                           gTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGACATTc                                                  >  2:3229744/1‑93 (MQ=255)
                                           gTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTc                                                  >  2:5073658/1‑93 (MQ=255)
                                           gTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTc                                                  >  1:2236455/1‑93 (MQ=255)
                                            ttGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGACATTCa                                                 >  2:1923875/1‑93 (MQ=255)
                                            ttGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCa                                                 <  1:2568808/93‑1 (MQ=255)
                                            ttGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATCGTCAGCCAGAGTTGATCAGTCAGGCGATGAAATTCa                                                 >  2:2435271/1‑93 (MQ=255)
                                             tGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCAc                                                <  1:2950358/93‑1 (MQ=255)
                                              gATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACt                                               >  2:3692728/1‑93 (MQ=255)
                                               aTTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGACATTCACTg                                              >  2:2247091/1‑93 (MQ=255)
                                                 ttCGCAGTCGATATCGCTGTCGCAATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTAGATCAGCCAGGCGATGAAATTCCCTGTc                                            <  1:5667577/93‑1 (MQ=255)
                                                   cGCAGTCTATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGt                                          <  1:2546543/93‑1 (MQ=255)
                                                    gCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGtt                                         <  1:5071652/93‑1 (MQ=255)
                                                     cAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCATCCAGGCGATGAAATTCACTGTCGTTc                                        >  2:2686410/1‑93 (MQ=255)
                                                      aGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCa                                       >  1:4004252/1‑93 (MQ=255)
                                                       gTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAt                                      <  2:3207689/93‑1 (MQ=255)
                                                          gATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgt                                   <  1:385666/93‑1 (MQ=255)
                                                          gATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgt                                   >  1:3903083/1‑93 (MQ=255)
                                                          gATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgt                                   <  1:3937571/93‑1 (MQ=255)
                                                          gATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgt                                   <  1:5968795/93‑1 (MQ=255)
                                                           atatCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgtt                                  <  1:1107160/93‑1 (MQ=255)
                                                           atatCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgtt                                  <  1:99856/93‑1 (MQ=255)
                                                           atatCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgtt                                  >  1:2785761/1‑93 (MQ=255)
                                                            tatCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgttg                                 >  1:3221804/1‑93 (MQ=255)
                                                            tatCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgttg                                 <  2:521640/93‑1 (MQ=255)
                                                            tatCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgttg                                 <  1:4121781/93‑1 (MQ=255)
                                                             atCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATtgttgt                                <  1:1606005/93‑1 (MQ=255)
                                                             atCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATtgttgt                                <  1:3449696/93‑1 (MQ=255)
                                                               cGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTAt                              <  2:6548269/93‑1 (MQ=255)
                                                                gCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATc                             >  2:70144/1‑93 (MQ=255)
                                                                   gTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTg                          >  1:2051261/1‑93 (MQ=255)
                                                                   gTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTg                          <  2:3548911/93‑1 (MQ=255)
                                                                     cGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGtt                        <  1:6279884/93‑1 (MQ=255)
                                                                     cGCCATCCCAGTCGTCAAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGtt                        <  2:5445205/93‑1 (MQ=255)
                                                                         aTCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTCTTa                    >  2:568117/1‑93 (MQ=255)
                                                                          tCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTaa                   >  2:908014/1‑93 (MQ=255)
                                                                          tCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTaa                   >  1:4595533/1‑93 (MQ=255)
                                                                          tCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTaa                   >  2:3777703/1‑93 (MQ=255)
                                                                            ccAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGt                 <  2:1524860/93‑1 (MQ=255)
                                                                            ccAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGt                 <  2:1282029/93‑1 (MQ=255)
                                                                             cAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTg                <  2:1813441/93‑1 (MQ=255)
                                                                              aGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGa               <  1:5822831/93‑1 (MQ=255)
                                                                              aGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGa               >  2:4147153/1‑93 (MQ=255)
                                                                              aGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGa               >  1:978401/1‑93 (MQ=255)
                                                                                   tcCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCCTTGTTGTATCCTGTTTTTAAGTGATggcg          >  1:2498971/1‑93 (MQ=255)
                                                                                   tcCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATggcg          >  1:5859930/1‑93 (MQ=255)
                                                                                     cAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATggcggc        >  2:2314268/1‑93 (MQ=255)
                                                                                      aGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCa       >  1:774687/1‑93 (MQ=255)
                                                                                       ggCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAg      >  1:2811665/1‑93 (MQ=255)
                                                                                       ggCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCATGTTTTTAAGTGATGGCGGCAg      >  1:4878652/1‑93 (MQ=255)
                                                                                        gcgcTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAGt     >  1:2149590/1‑93 (MQ=255)
                                                                                         cGTTCTTCAATGGTCAGCTAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCATGTTTTTAAGTGATGGCGGCAGta    <  1:1982662/93‑1 (MQ=255)
                                                                                           ttcttcAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAGtata  >  2:5857289/1‑93 (MQ=255)
                                                                                           |                                                                                            
TGATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAGTATA  >  NC_000913/3991525‑3991708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AATGATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAGTATAG  >  NC_000913/3991523‑3991709
                                                                                             |                                                                                             
AATGATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGC                                                                                               >  SRR4302547.2862759/1‑94 (MQ=60)
  TGATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTC                                                                                             >  SRR4302547.2351154/1‑94 (MQ=60)
   GATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCT                                                                                            <  SRR4302547.3434606/94‑1 (MQ=60)
   GATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCT                                                                                            <  SRR4302547.1038841/94‑1 (MQ=60)
   GATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCT                                                                                            >  SRR4302547.6043024/1‑94 (MQ=60)
    ATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTT                                                                                           <  SRR4302547.3529721/94‑1 (MQ=60)
       TTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAT                                                                                        >  SRR4302547.5443184/1‑94 (MQ=60)
         GCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATG                                                                                      >  SRR4302547.2846420/1‑94 (MQ=60)
         GCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATG                                                                                      >  SRR4302547.2252285/1‑94 (MQ=60)
          CTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCTTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGG                                                                                     <  SRR4302547.3396057/94‑1 (MQ=60)
          CTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGG                                                                                     >  SRR4302547.6350979/1‑94 (MQ=60)
          CTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGG                                                                                     >  SRR4302547.1532461/1‑94 (MQ=60)
          CTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGG                                                                                     >  SRR4302547.1572956/1‑94 (MQ=60)
           TGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGT                                                                                    <  SRR4302547.5145172/94‑1 (MQ=60)
           TGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGT                                                                                    <  SRR4302547.4451670/94‑1 (MQ=60)
            GCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTC                                                                                   >  SRR4302547.2884502/1‑94 (MQ=60)
            GCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTC                                                                                   >  SRR4302547.2897726/1‑94 (MQ=60)
            GCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTC                                                                                   >  SRR4302547.1362969/1‑94 (MQ=60)
            GCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTC                                                                                   <  SRR4302547.6191247/94‑1 (MQ=60)
             CCATTCTCGAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCA                                                                                  >  SRR4302547.5482067/1‑94 (MQ=60)
             CCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCA                                                                                  <  SRR4302547.441764/94‑1 (MQ=60)
             CCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCA                                                                                  >  SRR4302547.6380220/1‑94 (MQ=60)
             CCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCA                                                                                  >  SRR4302547.3012894/1‑94 (MQ=60)
             CCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCA                                                                                  >  SRR4302547.5115910/1‑94 (MQ=60)
             CCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCA                                                                                  >  SRR4302547.5473842/1‑94 (MQ=60)
              CATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAG                                                                                 >  SRR4302547.1930691/1‑94 (MQ=60)
              CATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAG                                                                                 >  SRR4302547.3384025/1‑94 (MQ=60)
              CATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAG                                                                                 >  SRR4302547.301032/1‑94 (MQ=60)
              CATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAG                                                                                 >  SRR4302547.2060914/1‑94 (MQ=60)
              CATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAG                                                                                 >  SRR4302547.1231627/1‑94 (MQ=60)
              CATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAG                                                                                 >  SRR4302547.1666501/1‑94 (MQ=60)
               ATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGC                                                                                <  SRR4302547.1099472/94‑1 (MQ=60)
               ATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGC                                                                                <  SRR4302547.5758134/94‑1 (MQ=60)
               ATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGC                                                                                >  SRR4302547.1708464/1‑94 (MQ=60)
               ATTCTCAAAGGTAATGGTCAGTACGCCGCCGCTGATTTCGCAGTCGATATCGCTGTGGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGC                                                                                >  SRR4302547.2589828/1‑94 (MQ=60)
                TTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCC                                                                               <  SRR4302547.1873156/94‑1 (MQ=60)
                TTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCC                                                                               <  SRR4302547.5164334/94‑1 (MQ=60)
                TTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCC                                                                               <  SRR4302547.2096830/94‑1 (MQ=60)
                TTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCC                                                                               <  SRR4302547.4362880/94‑1 (MQ=60)
                 TCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCA                                                                              <  SRR4302547.2789151/94‑1 (MQ=60)
                 TCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCA                                                                              <  SRR4302547.3693505/94‑1 (MQ=60)
                  CTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCCGCCAG                                                                             >  SRR4302547.4095508/1‑94 (MQ=60)
                  CTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAG                                                                             >  SRR4302547.5373218/1‑94 (MQ=60)
                  CTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAG                                                                             >  SRR4302547.5959438/1‑94 (MQ=60)
                  CTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAG                                                                             >  SRR4302547.4723988/1‑94 (MQ=60)
                     AAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGT                                                                          <  SRR4302547.4526650/94‑1 (MQ=60)
                      AAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTT                                                                         <  SRR4302547.6058135/94‑1 (MQ=60)
                       AGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTG                                                                        >  SRR4302547.1319576/1‑94 (MQ=60)
                       AGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTG                                                                        <  SRR4302547.4512100/94‑1 (MQ=60)
                       AGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTG                                                                        <  SRR4302547.3866450/94‑1 (MQ=60)
                        GGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGA                                                                       <  SRR4302547.502173/94‑1 (MQ=60)
                           AATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCA                                                                    >  SRR4302547.1853589/1‑94 (MQ=60)
                            ATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAG                                                                   >  SRR4302547.1982390/1‑94 (MQ=60)
                            ATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAG                                                                   >  SRR4302547.300688/1‑94 (MQ=60)
                            ATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAG                                                                   >  SRR4302547.5125225/1‑94 (MQ=60)
                            ATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAG                                                                   <  SRR4302547.2027125/94‑1 (MQ=60)
                              GGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCC                                                                 >  SRR4302547.3855178/1‑94 (MQ=60)
                              GGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCC                                                                 >  SRR4302547.3919440/1‑94 (MQ=60)
                              GGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGCCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCC                                                                 <  SRR4302547.4508336/94‑1 (MQ=60)
                               GTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCA                                                                <  SRR4302547.1855643/94‑1 (MQ=60)
                                TCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAG                                                               >  SRR4302547.1261285/1‑94 (MQ=60)
                                 CAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGG                                                              <  SRR4302547.5505000/94‑1 (MQ=60)
                                 CAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGG                                                              >  SRR4302547.1702282/1‑94 (MQ=60)
                                 CAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGG                                                              <  SRR4302547.2161000/94‑1 (MQ=60)
                                 CAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGG                                                              <  SRR4302547.5780744/94‑1 (MQ=60)
                                 CAGTACGCCGCCGTTGATTTCGAAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGG                                                              <  SRR4302547.4907972/94‑1 (MQ=60)
                                  AGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTGGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAtgt                                                             >  SRR4302547.2908743/1‑91 (MQ=60)
                                  AGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGC                                                             >  SRR4302547.4909885/1‑94 (MQ=60)
                                  AGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGC                                                             <  SRR4302547.3100812/94‑1 (MQ=60)
                                  AGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGC                                                             >  SRR4302547.3751906/1‑94 (MQ=60)
                                   GTACGCCGCCGTTGATTTCGCCGTCGATATCGCTGTCGCCCTCCCAGTCGTCCAGGCGCTCTTCAATAGTCAGCCAGAGGTGATCAGCCCGGCG                                                            >  SRR4302547.6279704/1‑94 (MQ=60)
                                   GTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCG                                                            <  SRR4302547.4919215/94‑1 (MQ=60)
                                   GTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCG                                                            <  SRR4302547.3693425/94‑1 (MQ=60)
                                     ACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGAT                                                          <  SRR4302547.902800/94‑1 (MQ=60)
                                      CGCGGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATG                                                         <  SRR4302547.5511757/94‑1 (MQ=60)
                                      CGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATG                                                         <  SRR4302547.273114/94‑1 (MQ=60)
                                       GCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGA                                                        <  SRR4302547.525196/94‑1 (MQ=60)
                                       GCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGA                                                        <  SRR4302547.1390686/94‑1 (MQ=60)
                                       GCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGA                                                        >  SRR4302547.1053679/1‑94 (MQ=60)
                                         CGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAA                                                      >  SRR4302547.4296893/1‑94 (MQ=60)
                                         CGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAA                                                      >  SRR4302547.332876/1‑94 (MQ=60)
                                         CGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAA                                                      <  SRR4302547.566085/94‑1 (MQ=60)
                                          GCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAAT                                                     >  SRR4302547.5462991/1‑94 (MQ=60)
                                           CCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATT                                                    >  SRR4302547.5045359/1‑94 (MQ=60)
                                            CGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTC                                                   >  SRR4302547.2281550/1‑94 (MQ=60)
                                             GTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCA                                                  >  SRR4302547.6160293/1‑94 (MQ=60)
                                              TTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCAC                                                 <  SRR4302547.3435855/94‑1 (MQ=60)
                                              TTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCAC                                                 <  SRR4302547.2620687/94‑1 (MQ=60)
                                               TGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACT                                                <  SRR4302547.3009106/94‑1 (MQ=60)
                                                GATTTCGCAGTCGATATCGCTGTCGCCATCCAAGGCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTG                                               >  SRR4302547.1768435/1‑94 (MQ=60)
                                                 ATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGT                                              <  SRR4302547.5797483/94‑1 (MQ=60)
                                                 ATTTCGCAGTCGATATCGCTATCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGT                                              >  SRR4302547.3927437/1‑94 (MQ=60)
                                                  TTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTC                                             <  SRR4302547.260527/94‑1 (MQ=60)
                                                   TTCGCAGTCGATATCGCTGTCGCAATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTAGATCAGCCAGGCGATGAAATTCCCTGTCG                                            <  SRR4302547.5784598/94‑1 (MQ=60)
                                                    TCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGT                                           <  SRR4302547.1991214/94‑1 (MQ=60)
                                                    TCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGT                                           <  SRR4302547.4074574/94‑1 (MQ=60)
                                                     CGCAGTCTATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTT                                          <  SRR4302547.2597969/94‑1 (MQ=60)
                                                      GCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTC                                         <  SRR4302547.5176290/94‑1 (MQ=60)
                                                       CAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCA                                        >  SRR4302547.4085643/1‑94 (MQ=60)
                                                        AGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAT                                       <  SRR4302547.3502604/94‑1 (MQ=60)
                                                        AGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAT                                       >  SRR4302547.2569236/1‑94 (MQ=60)
                                                         GTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATT                                      <  SRR4302547.265860/94‑1 (MQ=60)
                                                         GTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATT                                      <  SRR4302547.4988933/94‑1 (MQ=60)
                                                          TCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTG                                     >  SRR4302547.4321562/1‑94 (MQ=60)
                                                          TCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTG                                     <  SRR4302547.5320872/94‑1 (MQ=60)
                                                           CGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGT                                    >  SRR4302547.3982455/1‑94 (MQ=60)
                                                            GATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTT                                   <  SRR4302547.4945389/94‑1 (MQ=60)
                                                            GATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTT                                   <  SRR4302547.3035038/94‑1 (MQ=60)
                                                            GATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTT                                   <  SRR4302547.6092595/94‑1 (MQ=60)
                                                            GATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTT                                   >  SRR4302547.2841554/1‑94 (MQ=60)
                                                            GATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTT                                   >  SRR4302547.4022224/1‑94 (MQ=60)
                                                            GATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTT                                   <  SRR4302547.4017636/94‑1 (MQ=60)
                                                            GATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTT                                   >  SRR4302547.2728812/1‑94 (MQ=60)
                                                            GATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTT                                   <  SRR4302547.392812/94‑1 (MQ=60)
                                                            GATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTT                                   >  SRR4302547.3032887/1‑94 (MQ=60)
                                                             ATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTG                                  >  SRR4302547.3286073/1‑94 (MQ=60)
                                                             ATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTG                                  <  SRR4302547.1129453/94‑1 (MQ=60)
                                                             ATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTG                                  <  SRR4302547.5093875/94‑1 (MQ=60)
                                                             ATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTG                                  >  SRR4302547.3286072/1‑94 (MQ=60)
                                                             ATATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTG                                  <  SRR4302547.101699/94‑1 (MQ=60)
                                                              TATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGT                                 <  SRR4302547.4205541/94‑1 (MQ=60)
                                                              TATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGT                                 <  SRR4302547.5379260/94‑1 (MQ=60)
                                                               ATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTA                                <  SRR4302547.1637844/94‑1 (MQ=60)
                                                               ATCGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTA                                <  SRR4302547.3520017/94‑1 (MQ=60)
                                                                TCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTAT                               <  SRR4302547.4566152/94‑1 (MQ=60)
                                                                 CGCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATAAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATC                              >  SRR4302547.1585251/1‑94 (MQ=60)
                                                                  GCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCC                             >  SRR4302547.4727784/1‑94 (MQ=60)
                                                                  GCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCC                             <  SRR4302547.1920182/94‑1 (MQ=60)
                                                                  CCTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCC                             <  SRR4302547.280933/94‑1 (MQ=60)
                                                                   CTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCT                            <  SRR4302547.5867592/94‑1 (MQ=60)
                                                                   CTGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTCTTGTATCCT                            <  SRR4302547.6636308/94‑1 (MQ=60)
                                                                    TGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTG                           >  SRR4302547.2092175/1‑94 (MQ=60)
                                                                    TGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTG                           >  SRR4302547.6503183/1‑94 (MQ=60)
                                                                    TGTCGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTG                           >  SRR4302547.4408621/1‑94 (MQ=60)
                                                                       CGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTT                        <  SRR4302547.6410360/94‑1 (MQ=60)
                                                                       CGCCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTT                        >  SRR4302547.1019455/1‑94 (MQ=60)
                                                                         CCATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTT                      <  SRR4302547.3941069/94‑1 (MQ=60)
                                                                          CATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGGTCAGCCAGACGATGCAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTA                     >  SRR4302547.2457789/1‑94 (MQ=60)
                                                                          CATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTA                     >  SRR4302547.1173055/1‑94 (MQ=60)
                                                                           ATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAA                    >  SRR4302547.4690624/1‑94 (MQ=60)
                                                                           ATCCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAA                    >  SRR4302547.1002367/1‑94 (MQ=60)
                                                                             CCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGT                  <  SRR4302547.1018088/94‑1 (MQ=60)
                                                                             CCCAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGT                  <  SRR4302547.3867442/94‑1 (MQ=60)
                                                                               CAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGA                <  SRR4302547.838421/94‑1 (MQ=60)
                                                                               CAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGA                >  SRR4302547.997423/1‑94 (MQ=60)
                                                                               CAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGA                <  SRR4302547.5217337/94‑1 (MQ=60)
                                                                               CAGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGA                >  SRR4302547.4195040/1‑94 (MQ=60)
                                                                                AGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGAT               >  SRR4302547.3301663/1‑94 (MQ=60)
                                                                                AGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGAT               >  SRR4302547.535218/1‑94 (MQ=60)
                                                                                AGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGAT               <  SRR4302547.5943305/94‑1 (MQ=60)
                                                                                AGTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGAT               <  SRR4302547.3971789/94‑1 (MQ=60)
                                                                                 GTCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATG              <  SRR4302547.5973409/94‑1 (MQ=60)
                                                                                  TCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGG             <  SRR4302547.2083331/94‑1 (MQ=60)
                                                                                  TCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGG             >  SRR4302547.2845158/1‑94 (MQ=60)
                                                                                  TCGTCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGG             <  SRR4302547.320073/94‑1 (MQ=60)
                                                                                   CGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGG            >  SRR4302547.3323416/1‑94 (MQ=60)
                                                                                    GTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCCTTGTTGTATCCTGTTTTTAAGTGATGGCG           >  SRR4302547.2549454/1‑94 (MQ=60)
                                                                                    GTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCG           >  SRR4302547.5981199/1‑94 (MQ=60)
                                                                                    GTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCG           >  SRR4302547.2602746/1‑94 (MQ=60)
                                                                                    GTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCG           <  SRR4302547.3997748/94‑1 (MQ=60)
                                                                                     TCCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGG          <  SRR4302547.2205769/94‑1 (MQ=60)
                                                                                      CCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGC         <  SRR4302547.4408103/94‑1 (MQ=60)
                                                                                      CCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGC         >  SRR4302547.5180448/1‑94 (MQ=60)
                                                                                      CCAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGC         >  SRR4302547.1439272/1‑94 (MQ=60)
                                                                                       CAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCA        <  SRR4302547.1013284/94‑1 (MQ=60)
                                                                                       CAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCA        >  SRR4302547.789332/1‑94 (MQ=60)
                                                                                       CAGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGAGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCA        >  SRR4302547.397910/1‑94 (MQ=60)
                                                                                        AGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAG       <  SRR4302547.1431828/94‑1 (MQ=60)
                                                                                        AGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAG       >  SRR4302547.2867917/1‑94 (MQ=60)
                                                                                        AGGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCATGTTTTTAAGTGATGGCGGCAG       >  SRR4302547.4979733/1‑94 (MQ=60)
                                                                                         GGCGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAGT      >  SRR4302547.2192490/1‑94 (MQ=60)
                                                                                           CGTTCTTCAATGGTCAGCTAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCATGTTTTTAAGTGATGGCGGCAGTAT    <  SRR4302547.2022031/94‑1 (MQ=60)
                                                                                           CGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAGTAT    >  SRR4302547.520781/1‑94 (MQ=60)
                                                                                           CGCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAGTAT    >  SRR4302547.1158348/1‑94 (MQ=60)
                                                                                            GCTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAGTATA   <  SRR4302547.4523319/94‑1 (MQ=60)
                                                                                             CTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAGTATAG  >  SRR4302547.5202992/1‑94 (MQ=60)
                                                                                             CTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAGTATAG  <  SRR4302547.4844578/94‑1 (MQ=60)
                                                                                             CTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAGTATAG  >  SRR4302547.4601475/1‑94 (MQ=60)
                                                                                             CTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAGTATAG  >  SRR4302547.985882/1‑94 (MQ=60)
                                                                                             |                                                                                             
AATGATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGATGGCGGCAGTATAG  >  NC_000913/3991523‑3991709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: