Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,394,272 |
C→T |
P210P (CCC→CCT) |
amiB → |
N‑acetylmuramoyl‑l‑alanine amidase II |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,394,272 | 0 | C | T | 85.6%
| 779.3
/ 89.8
| 271 | P210P (CCC→CCT) | amiB | N‑acetylmuramoyl‑l‑alanine amidase II |
| Reads supporting (aligned to +/- strand): ref base C (18/21); new base T (116/116); total (134/137) |
| Fisher's exact test for biased strand distribution p-value = 7.30e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.20e-01 |
Only 100 of 285 total aligned reads displayed.
GGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAA > NC_000913/4394182‑4394363
|
ggCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTgg < 1:2700381/93‑1 (MQ=255)
cAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTggtg < 2:4568079/93‑1 (MQ=255)
aGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCtggtgg < 1:3619227/93‑1 (MQ=255)
gcgcgcgcGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTggtggt < 1:3715516/93‑1 (MQ=255)
gcgcgcgcGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTggtggt > 2:5111464/1‑93 (MQ=255)
cgcgcgcgACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTa > 2:3169805/1‑93 (MQ=255)
cgcgcgACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTAcg > 2:227236/1‑93 (MQ=255)
gcgcgACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTAcgc > 1:4775834/1‑93 (MQ=255)
cgcgACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTAcgcg > 1:887405/1‑93 (MQ=255)
gcgACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCgg > 1:5510680/1‑93 (MQ=255)
gcgACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCgg < 1:5938889/93‑1 (MQ=255)
gcgACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCgg < 1:5975744/93‑1 (MQ=255)
gcgACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCgg < 2:4264249/93‑1 (MQ=255)
gACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTTGTACGCGGga > 1:75568/1‑93 (MQ=255)
gACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGga > 2:1674771/1‑93 (MQ=255)
gACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGga < 1:5865082/93‑1 (MQ=255)
gACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGga < 2:1313605/93‑1 (MQ=255)
gACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGAACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGga > 2:2997827/1‑93 (MQ=255)
aCGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGgag > 2:545511/1‑93 (MQ=255)
aCGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGgag > 1:5185993/1‑93 (MQ=255)
cGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGgaga < 2:905126/93‑1 (MQ=255)
cGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGgaga > 1:1408798/1‑93 (MQ=255)
ggCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGaa < 2:5342398/93‑1 (MQ=255)
cTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGCGGTACGCGGGAGcaaa > 2:1592530/1‑93 (MQ=255)
cTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGaaaa > 1:2318190/1‑93 (MQ=255)
tAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGaaaaa > 2:1156909/1‑93 (MQ=255)
tAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGaaaaa > 1:4070973/1‑93 (MQ=255)
aaCACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAAt > 1:5649501/1‑93 (MQ=255)
acacTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATg > 2:1415591/1‑93 (MQ=255)
acacTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATg > 2:3887785/1‑93 (MQ=255)
acacTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATg > 1:1552783/1‑93 (MQ=255)
acTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTc > 1:2952203/1‑93 (MQ=255)
cTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCa > 1:3583366/1‑93 (MQ=255)
tGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCAc > 1:4425021/1‑93 (MQ=255)
ggCGATAAAATTATCATCGCTATTGATGCCTGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCAcc < 2:5318076/93‑1 (MQ=255)
ggCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCAcc > 1:5577615/1‑93 (MQ=255)
cGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCAccat < 2:3344095/93‑1 (MQ=255)
cGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGACGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCAccat < 2:4670676/93‑1 (MQ=255)
gATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCAccatc < 2:437234/93‑1 (MQ=255)
gATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCAccatc > 1:864454/1‑93 (MQ=255)
gATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCAccatc > 1:4681265/1‑93 (MQ=255)
gATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCAccatc > 2:5915441/1‑93 (MQ=255)
aaTTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCAccatcgccat < 1:6600065/93‑1 (MQ=255)
aaTTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCAccatcgccat < 2:2782228/93‑1 (MQ=255)
aTTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCAccatcgccatc < 1:107868/93‑1 (MQ=255)
tATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCAccatcgccatccc < 1:4190761/93‑3 (MQ=255)
tATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACcatcgccatcgc < 1:1825165/93‑1 (MQ=255)
atcatcGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATcgcg < 1:1320226/93‑1 (MQ=255)
tcatcGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATcgcgc < 1:3082326/93‑1 (MQ=255)
atcGCTATTGATGCCGGATACGGCCGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGt < 1:33896/93‑1 (MQ=255)
atcGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGt > 1:5315079/1‑93 (MQ=255)
atcGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGt < 2:6515653/93‑1 (MQ=255)
atcGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGt > 1:2532211/1‑93 (MQ=255)
gCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTaaa > 2:5760692/1‑93 (MQ=255)
cTATTGATGCCGGACAAGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGCGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAAt > 1:4488537/1‑93 (MQ=255)
tATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAAtt < 2:6462179/93‑1 (MQ=255)
tATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAAtt > 2:1099685/1‑93 (MQ=255)
tATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAAtt > 2:4111261/1‑93 (MQ=255)
aTTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTg > 2:4815897/1‑93 (MQ=255)
ttGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGc < 1:4978986/93‑1 (MQ=255)
tGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCg < 2:4424757/93‑1 (MQ=255)
gATGCCGGACACGGCGGTCATGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGt < 2:5534406/93‑1 (MQ=255)
gATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGt > 1:1973373/1‑93 (MQ=255)
attccGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTa < 1:6041624/90‑1 (MQ=255)
aTGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTa > 2:3075529/1‑93 (MQ=255)
tGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCATGGTGGTACGCGGGAGGAAAGTGTCACCATCGCCATCGGGCGTAAATTGCGtgc > 2:2188452/1‑91 (MQ=255)
ccGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACtt < 2:5210255/93‑1 (MQ=255)
ccGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACtt < 2:501373/93‑1 (MQ=255)
cGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACttt < 2:4057388/93‑1 (MQ=255)
ggACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTg < 2:2712699/93‑1 (MQ=255)
gACACTGCCGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGc < 1:2188955/93‑1 (MQ=255)
gACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGc > 1:1808856/1‑93 (MQ=255)
gACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGc > 2:6599719/1‑93 (MQ=255)
gACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGc < 1:4854231/93‑1 (MQ=255)
gACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGc > 2:1440575/1‑93 (MQ=255)
cacGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTc < 1:4965493/93‑1 (MQ=255)
cggcggTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCaa < 2:2565721/93‑1 (MQ=255)
ggcggTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAAt < 2:2326611/93‑1 (MQ=255)
ggcggTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAAt < 2:1281106/93‑1 (MQ=255)
ggcggTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAAt < 1:1637149/93‑1 (MQ=255)
cggTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGa < 1:2898389/93‑1 (MQ=255)
cggTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGa < 1:343873/93‑1 (MQ=255)
gTCAGCACTCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACg < 1:977650/93‑1 (MQ=255)
ggACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATcc < 2:2407860/93‑1 (MQ=255)
aCCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGa > 2:2076138/1‑93 (MQ=255)
tGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGtt > 2:3703267/1‑93 (MQ=255)
ggCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGttt > 2:364165/1‑93 (MQ=255)
gcTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTaaa > 1:3828688/1‑93 (MQ=255)
cTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAg < 2:2541197/93‑1 (MQ=255)
cTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAg < 2:6196808/93‑1 (MQ=255)
cTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAg < 2:351945/93‑1 (MQ=255)
cTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGGACTTTGCTCAATGACGATCCGATGTTTAAAg > 2:608186/1‑93 (MQ=255)
tATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAgg < 2:1923503/93‑1 (MQ=255)
ggCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGtt < 1:6432716/93‑1 (MQ=255)
ggCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGtt < 1:1000389/93‑1 (MQ=255)
ggCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGtt < 1:3006798/93‑1 (MQ=255)
gCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGttt < 2:2760107/93‑1 (MQ=255)
gCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGttt < 1:5059372/93‑1 (MQ=255)
gCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGttt > 2:4214193/1‑93 (MQ=255)
ccctGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGtttt > 1:328208/1‑93 (MQ=255)
|
GGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAA > NC_000913/4394182‑4394363
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAACC > NC_000913/4394179‑4394365
|
TCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCT < SRR4302547.4272670/94‑1 (MQ=60)
TCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCT < SRR4302547.4798843/94‑1 (MQ=60)
TCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCC < SRR4302547.2949678/94‑1 (MQ=60)
CGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGG > SRR4302547.5078791/1‑94 (MQ=60)
GGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGT < SRR4302547.2754580/94‑1 (MQ=60)
GGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGT < SRR4302547.2026586/94‑1 (MQ=60)
GGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGT < SRR4302547.945284/94‑1 (MQ=60)
GCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTG < SRR4302547.1619661/94‑1 (MQ=60)
AGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGT < SRR4302547.3693060/94‑1 (MQ=60)
GCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTA < SRR4302547.2664038/94‑1 (MQ=60)
GCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTA < SRR4302547.3791356/94‑1 (MQ=60)
GCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTA < SRR4302547.2906729/94‑1 (MQ=60)
GCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACG < SRR4302547.3142022/94‑1 (MQ=60)
CGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGC > SRR4302547.4874773/1‑94 (MQ=60)
GCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCG > SRR4302547.904456/1‑94 (MQ=60)
CGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGG > SRR4302547.5624451/1‑94 (MQ=60)
GCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGG < SRR4302547.6062035/94‑1 (MQ=60)
GCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGG < SRR4302547.6099689/94‑1 (MQ=60)
GCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGG < SRR4302547.5999875/94‑1 (MQ=60)
CGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTTGTACGCGGGA > SRR4302547.76981/1‑94 (MQ=60)
CGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGA > SRR4302547.2235645/1‑94 (MQ=60)
CGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGA > SRR4302547.817179/1‑94 (MQ=60)
GACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAG < SRR4302547.5986471/94‑1 (MQ=60)
GACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAG > SRR4302547.3881618/1‑94 (MQ=60)
GACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAG > SRR4302547.4847690/1‑94 (MQ=60)
GACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAG > SRR4302547.5292725/1‑94 (MQ=60)
ACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGA > SRR4302547.3469966/1‑94 (MQ=60)
ACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGA > SRR4302547.1436980/1‑94 (MQ=60)
CGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAA < SRR4302547.2954487/94‑1 (MQ=60)
GGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAA > SRR4302547.1850868/1‑94 (MQ=60)
GCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGTACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAA < SRR4302547.3907914/94‑1 (MQ=60)
GCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAA > SRR4302547.2146201/1‑94 (MQ=60)
GCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAA > SRR4302547.2365175/1‑94 (MQ=60)
CTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAA > SRR4302547.4153673/1‑94 (MQ=60)
TAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAAT < SRR4302547.6084893/94‑1 (MQ=60)
TAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAAT > SRR4302547.5766126/1‑94 (MQ=60)
TAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAAT > SRR4302547.5130715/1‑94 (MQ=60)
AACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATG > SRR4302547.1583687/1‑94 (MQ=60)
CACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTC > SRR4302547.3010980/1‑94 (MQ=60)
ACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCA > SRR4302547.3656480/1‑94 (MQ=60)
ACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCA < SRR4302547.240105/94‑1 (MQ=60)
CTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCAC > SRR4302547.4516445/1‑94 (MQ=60)
CTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTCGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCAC > SRR4302547.882574/1‑94 (MQ=60)
TGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACC > SRR4302547.5692636/1‑94 (MQ=60)
GGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCA > SRR4302547.3105914/1‑94 (MQ=60)
GCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCAT < SRR4302547.6574974/94‑1 (MQ=60)
CGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATC > SRR4302547.1907048/1‑94 (MQ=60)
CGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATC > SRR4302547.880990/1‑94 (MQ=60)
CGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATC > SRR4302547.4778234/1‑94 (MQ=60)
GATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCG < SRR4302547.1007140/94‑1 (MQ=60)
GATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCG > SRR4302547.534671/1‑94 (MQ=60)
GATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCG < SRR4302547.1748138/94‑1 (MQ=60)
ATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGC > SRR4302547.1414413/1‑94 (MQ=60)
ATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGC > SRR4302547.3382244/1‑94 (MQ=60)
TAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCC > SRR4302547.3928904/1‑94 (MQ=60)
AAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCA < SRR4302547.3787902/94‑1 (MQ=60)
AATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATC < SRR4302547.6737449/94‑1 (MQ=60)
AATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATC < SRR4302547.4985942/94‑1 (MQ=60)
AATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATC > SRR4302547.1498790/1‑94 (MQ=60)
AATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATC > SRR4302547.6717677/1‑94 (MQ=60)
AAGTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATC < SRR4302547.1026291/94‑1 (MQ=60)
ATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCG < SRR4302547.109840/94‑1 (MQ=60)
ATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCG < SRR4302547.3299009/94‑1 (MQ=60)
ATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCG < SRR4302547.1275089/94‑1 (MQ=60)
TATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCG < SRR4302547.1861248/94‑1 (MQ=60)
TATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCCCG < SRR4302547.4276227/94‑1 (MQ=60)
ATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGC < SRR4302547.1346768/94‑1 (MQ=60)
TCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCG < SRR4302547.1822433/94‑1 (MQ=60)
TCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCG < SRR4302547.3143517/94‑1 (MQ=60)
CATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGT > SRR4302547.2583388/1‑94 (MQ=60)
CATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGT > SRR4302547.5424684/1‑94 (MQ=60)
CTCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTA < SRR4302547.4847584/94‑1 (MQ=60)
ATCGCTATTGATGCCGGATACGGCCGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTA < SRR4302547.34509/94‑1 (MQ=60)
CGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAA < SRR4302547.3673462/94‑1 (MQ=60)
GCTATTGATGCCGGACAAGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGCGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAAT > SRR4302547.4581256/1‑94 (MQ=60)
CTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATT > SRR4302547.1578414/1‑94 (MQ=60)
TATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTG > SRR4302547.3062612/1‑94 (MQ=60)
ATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGC > SRR4302547.2318205/1‑94 (MQ=60)
ATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGC < SRR4302547.3564658/94‑1 (MQ=60)
ATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGC < SRR4302547.4904910/94‑1 (MQ=60)
TTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCG < SRR4302547.5081969/94‑1 (MQ=60)
TTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCG < SRR4302547.5453291/94‑1 (MQ=60)
TTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCG < SRR4302547.3211316/94‑1 (MQ=60)
TGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGT > SRR4302547.2012549/1‑94 (MQ=60)
TGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGT < SRR4302547.687285/94‑1 (MQ=60)
GATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTA > SRR4302547.4526949/1‑94 (MQ=60)
ATTCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTAC < SRR4302547.6166989/94‑1 (MQ=60)
ATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTAC < SRR4302547.5698984/94‑1 (MQ=60)
GCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTT > SRR4302547.3466112/1‑94 (MQ=60)
CCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTT < SRR4302547.783041/94‑1 (MQ=60)
CGGACACGGCGGTCAGGGCCCTGGCGCGATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTG < SRR4302547.1111042/94‑1 (MQ=60)
CGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCCTACTTTG < SRR4302547.5634517/94‑1 (MQ=60)
CGGACACGCCGGTCACGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGAAAATTGCGTACTTTG > SRR4302547.2414329/1‑94 (MQ=60)
GGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGC > SRR4302547.1844600/1‑94 (MQ=60)
GGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGC > SRR4302547.4899554/1‑94 (MQ=60)
GGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGC > SRR4302547.57407/1‑94 (MQ=60)
GACACTGCCGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCT < SRR4302547.2232874/94‑1 (MQ=60)
GACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCT < SRR4302547.4954805/94‑1 (MQ=60)
ACACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTC < SRR4302547.6423499/94‑1 (MQ=60)
CACGGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCA > SRR4302547.5080457/1‑94 (MQ=60)
CACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCA < SRR4302547.5068250/94‑1 (MQ=60)
GGCGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATG < SRR4302547.1669515/94‑1 (MQ=60)
CGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGAC < SRR4302547.350259/94‑1 (MQ=60)
CGGTCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGAC < SRR4302547.2956183/94‑1 (MQ=60)
CGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGAC < SRR4302547.4967976/94‑1 (MQ=60)
GGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACG > SRR4302547.5910113/1‑94 (MQ=60)
GTCAGCACTCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGA < SRR4302547.996662/94‑1 (MQ=60)
GCAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGAT < SRR4302547.4636124/94‑1 (MQ=60)
CAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATC > SRR4302547.6155566/1‑94 (MQ=60)
CAGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATC < SRR4302547.5639989/94‑1 (MQ=60)
AGGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCC > SRR4302547.5852309/1‑94 (MQ=60)
GGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCG > SRR4302547.5295001/1‑94 (MQ=60)
GGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCG < SRR4302547.3794240/94‑1 (MQ=60)
GGACCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCG > SRR4302547.5553812/1‑94 (MQ=60)
CCCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATG > SRR4302547.420577/1‑94 (MQ=60)
CCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGT > SRR4302547.4403751/1‑94 (MQ=60)
CCTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGT > SRR4302547.354957/1‑94 (MQ=60)
CTGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTT < SRR4302547.6778459/94‑1 (MQ=60)
TGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTT < SRR4302547.1973884/94‑1 (MQ=60)
TGGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTT < SRR4302547.2716854/94‑1 (MQ=60)
GGCGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTA > SRR4302547.5263720/1‑94 (MQ=60)
CGCTATCGGCCCTGGTGGTACGCGGTAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAA < SRR4302547.6117909/94‑1 (MQ=60)
CGCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAA > SRR4302547.3906674/1‑94 (MQ=60)
GCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTAacttgctcgatggcgatctgatggttgaag > SRR4302547.5994547/1‑64 (MQ=60)
GCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAG < SRR4302547.3032322/94‑1 (MQ=60)
GCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAG < SRR4302547.3437760/94‑1 (MQ=60)
CCTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAG < SRR4302547.424096/94‑1 (MQ=60)
CTATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGG < SRR4302547.6536342/94‑1 (MQ=60)
TATCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGC > SRR4302547.3715205/1‑94 (MQ=60)
ATCGGCCCTGGTGGGACGCGGCAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCG < SRR4302547.4486166/94‑1 (MQ=60)
TCGGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGT < SRR4302547.5140801/94‑1 (MQ=60)
GGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTT < SRR4302547.3066596/94‑1 (MQ=60)
GGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTT < SRR4302547.6566795/94‑1 (MQ=60)
GGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTT > SRR4302547.2447641/1‑94 (MQ=60)
GGCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTT < SRR4302547.1019889/94‑1 (MQ=60)
GCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTT < SRR4302547.1583949/94‑1 (MQ=60)
GCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTT > SRR4302547.334314/1‑94 (MQ=60)
GCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTT < SRR4302547.2983985/94‑1 (MQ=60)
GCCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTT < SRR4302547.5163785/94‑1 (MQ=60)
CCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCTTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTA < SRR4302547.993938/94‑1 (MQ=60)
CCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTA > SRR4302547.1768693/1‑94 (MQ=60)
CCCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTA < SRR4302547.1430499/94‑1 (MQ=60)
CCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAA > SRR4302547.5691786/1‑94 (MQ=60)
CCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAA < SRR4302547.2142903/94‑1 (MQ=60)
CCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAA < SRR4302547.1780192/94‑1 (MQ=60)
CCTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGAAGATCCGttggtttaaggaggtttaa > SRR4302547.3342700/1‑75 (MQ=60)
CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAA < SRR4302547.4774160/94‑1 (MQ=60)
CTGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAAC > SRR4302547.4942168/1‑94 (MQ=60)
CCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAAC < SRR4302547.5996302/94‑1 (MQ=60)
TGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTCCTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAACC < SRR4302547.2043853/94‑1 (MQ=60)
TGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAACC < SRR4302547.2405319/94‑1 (MQ=60)
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TCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAACC > NC_000913/4394179‑4394365
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
