Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,449,738 |
+G |
coding (1106/1254 nt) |
ytfR → |
YtfR |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,449,737 | 1 | . | G | 99.2%
| 922.6
/ ‑5.6
| 252 | C369G (TGC→GGC) | ytfR | YtfR |
| Reads supporting (aligned to +/- strand): ref base . (0/0); major base G (121/129); minor base A (1/1); total (122/130) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 286 total aligned reads displayed.
GCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑GCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACA > NC_000913/4449645‑4449824
|
gCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGgct > 2:688795/1‑93 (MQ=255)
gCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGgct > 1:2249965/1‑93 (MQ=255)
gCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGgct > 2:401865/1‑93 (MQ=255)
cTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGgct‑g > 1:5732179/1‑93 (MQ=255)
cTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGgct‑g < 1:6104169/93‑1 (MQ=255)
ttCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGCAAATATCATCCTCGCTCTCCAGGCCCAGCGCGgct‑gg > 2:5253863/1‑92 (MQ=255)
tGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGTGgct‑ggcta > 2:862101/1‑89 (MQ=255)
tGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGgct‑ggcta < 1:2877197/93‑5 (MQ=255)
cccGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACg > 1:6418958/1‑93 (MQ=255)
cccGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACg < 1:275326/93‑1 (MQ=255)
ccGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGt > 2:1601839/1‑93 (MQ=255)
cGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTc < 1:3056676/93‑1 (MQ=255)
aaGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCa > 2:5434134/1‑93 (MQ=255)
gACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCAtt < 1:6030672/93‑1 (MQ=255)
cAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTc > 1:3979618/1‑93 (MQ=255)
aGGAAAACCGATGGCATCGTCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTcc > 1:3671674/1‑93 (MQ=255)
ggAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTccc > 2:5168475/1‑93 (MQ=255)
gAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCg > 1:4810083/1‑93 (MQ=255)
aaCCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCaa > 2:3884561/1‑93 (MQ=255)
gATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGaa < 1:4989207/93‑1 (MQ=255)
aTGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAAc > 1:917909/1‑93 (MQ=255)
gCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGc > 2:4140263/1‑93 (MQ=255)
atcatcGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCaa > 2:2130084/1‑93 (MQ=255)
atcatcGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCaa > 1:1149410/1‑93 (MQ=255)
atcatcGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCaa < 2:4588727/93‑1 (MQ=255)
atcatcGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCaa < 1:3243885/93‑1 (MQ=255)
tcatcGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAag > 1:1278848/1‑93 (MQ=255)
catcGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAaga > 2:3447417/1‑93 (MQ=255)
tcGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAgaga < 2:11396/93‑1 (MQ=255)
cGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGAt > 2:3815320/1‑93 (MQ=255)
cGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGAt < 2:2238630/93‑1 (MQ=255)
tGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGc > 2:6400787/1‑93 (MQ=255)
ccgccTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCg < 2:5665275/93‑1 (MQ=255)
ccgccTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCg < 1:5213242/93‑1 (MQ=255)
ccgccTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCg < 1:5561630/93‑1 (MQ=255)
ccgccTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCg < 1:4339509/93‑1 (MQ=255)
cgccTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTAGCTCCGTCCCACTTCCCGCAAAGAACAGCAAGAGGTTGCCGa < 1:3173123/93‑1 (MQ=255)
gccTCGGTGCGGGCAAATATCATCCTAGCTCTCCAGGCCCAGCGCGGCTAGCTACGTCCCATTTCCCGCGCACAACAGCAAGAGACTGCCGaa > 1:2110177/1‑93 (MQ=255)
gccTCGGTGCGGGAAAATATCATCCTCGCTGTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGaa > 2:3962359/1‑93 (MQ=255)
gccTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGaa > 2:595281/1‑93 (MQ=255)
gccTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGaa > 1:2526597/1‑93 (MQ=255)
gccTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGaa < 1:2400068/93‑1 (MQ=255)
ccTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAAc < 2:1198880/93‑1 (MQ=255)
ccTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAAc < 2:3753129/93‑1 (MQ=255)
tCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGc < 2:5772990/93‑1 (MQ=255)
tCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGc < 2:1927415/93‑1 (MQ=255)
cGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCt > 2:2915221/1‑93 (MQ=255)
cGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCt < 1:1686546/93‑1 (MQ=255)
gTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCttt > 1:1043597/1‑93 (MQ=255)
gTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCttt < 1:5901224/93‑1 (MQ=255)
gCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTAt < 1:690404/93‑1 (MQ=255)
gCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTAt < 1:4528172/93‑1 (MQ=255)
cGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATc > 1:4675804/1‑93 (MQ=255)
cGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATc < 1:1488063/93‑1 (MQ=255)
gggAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATcc > 1:2299935/1‑93 (MQ=255)
gAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGc < 2:725653/93‑1 (MQ=255)
aaTATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAg > 2:2628554/1‑93 (MQ=255)
atatCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGc > 1:2683205/1‑93 (MQ=255)
tatCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCt < 1:1749544/93‑1 (MQ=255)
tatCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCt < 2:4147381/93‑1 (MQ=255)
tatCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCt < 1:6057899/93‑1 (MQ=255)
atcatcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCtt > 2:6378298/1‑93 (MQ=255)
atcatcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCtt < 1:6345834/93‑1 (MQ=255)
tcatcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTg < 2:3256604/93‑1 (MQ=255)
catcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTgg > 2:146770/1‑93 (MQ=255)
catcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTgg > 2:3639270/1‑93 (MQ=255)
cacccTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTgg < 1:6545091/90‑1 (MQ=255)
atcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGc > 2:5117721/1‑93 (MQ=255)
tcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCa > 1:2334907/1‑93 (MQ=255)
tcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCa < 2:5296797/93‑1 (MQ=255)
tcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAAAGCTTTATCCGCCAGCTTGGCa > 1:2921294/1‑93 (MQ=255)
ccTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCAt < 1:3938635/93‑1 (MQ=255)
cTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCAtt < 1:763322/93‑1 (MQ=255)
tCGGTCGCCAGGCCCAGCGCGGCTGGCTACGTCCTATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTc < 1:2821570/93‑1 (MQ=255)
tCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTc < 2:4847697/93‑1 (MQ=255)
tCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTc > 2:506636/1‑93 (MQ=255)
cGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCg > 2:6502935/1‑93 (MQ=255)
ctctCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGcc > 2:1506603/1‑92 (MQ=255)
ctctCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGca < 1:5184761/93‑1 (MQ=255)
ctctCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGca > 1:4361236/1‑93 (MQ=255)
tctcCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGcac > 1:3519155/1‑93 (MQ=255)
ctcCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGcaca > 2:3172070/1‑93 (MQ=255)
tcCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCacac > 2:1430490/1‑93 (MQ=255)
ccAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACAcc > 1:6230353/1‑93 (MQ=255)
cAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCt < 1:3498463/93‑1 (MQ=255)
cAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCGTGGCATTCGCACACCt > 2:3302331/1‑93 (MQ=255)
aGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCtt < 1:5133156/93‑1 (MQ=255)
aGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCtt > 1:6450715/1‑93 (MQ=255)
ggCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTc > 1:4072457/1‑93 (MQ=255)
ggCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTc < 1:4054401/93‑1 (MQ=255)
ggCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTc > 2:4521279/1‑93 (MQ=255)
ccaaGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTAGCCGCCAGCTTGGCATTCGCACACCTTCaa < 1:5310379/90‑1 (MQ=255)
ccAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAAc < 2:1883134/93‑1 (MQ=255)
gcgcGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGa < 1:6250226/93‑1 (MQ=255)
gcgcGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGa > 2:4771361/1‑93 (MQ=255)
gcgGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGaac < 2:6045133/93‑1 (MQ=255)
gcgGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGaac < 1:1879703/93‑1 (MQ=255)
cgGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGaaca < 2:1016871/93‑1 (MQ=255)
cgGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGaaca < 1:806932/93‑1 (MQ=255)
cgGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGaaca > 2:2394497/1‑93 (MQ=255)
|
GCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑GCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACA > NC_000913/4449645‑4449824
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑G‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACCGATT > NC_000913/4449645‑4449831
|
GCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑G < SRR4302547.6160933/94‑1 (MQ=60)
GCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑G > SRR4302547.5850609/1‑94 (MQ=60)
CTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑G‑G > SRR4302547.6597501/1‑94 (MQ=60)
CTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑G‑G > SRR4302547.6554556/1‑94 (MQ=60)
CTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑G‑G > SRR4302547.2967251/1‑94 (MQ=60)
CTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑G‑G < SRR4302547.6230794/94‑1 (MQ=60)
CTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑G‑G < SRR4302547.5955197/94‑1 (MQ=60)
TTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑Ggc > SRR4302547.5247860/1‑92 (MQ=60)
TCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑Ggct < SRR4302547.637920/94‑4 (MQ=60)
CTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTA < SRR4302547.238712/94‑1 (MQ=60)
CTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTA > SRR4302547.4152697/1‑94 (MQ=60)
CTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTA < SRR4302547.4436231/94‑1 (MQ=60)
TGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTAC < SRR4302547.2934633/94‑1 (MQ=60)
TGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTAC < SRR4302547.3676365/94‑1 (MQ=60)
GCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACG > SRR4302547.6552786/1‑94 (MQ=60)
CCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGT < SRR4302547.280472/94‑1 (MQ=60)
CCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGT > SRR4302547.4040137/1‑94 (MQ=60)
CCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCCGCTGG‑CTACGT > SRR4302547.228212/1‑94 (MQ=60)
CCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGCCCCAGCGCGGCT‑Ggctgcgc > SRR4302547.3794140/1‑87 (MQ=60)
CCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTC > SRR4302547.413069/1‑94 (MQ=60)
CCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTC > SRR4302547.5776661/1‑94 (MQ=60)
CCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑Ggcttcgtc < SRR4302547.3043205/94‑9 (MQ=60)
NGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCC > SRR4302547.6001324/1‑94 (MQ=60)
CGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCC < SRR4302547.5446182/94‑1 (MQ=60)
CGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCC < SRR4302547.3117500/94‑1 (MQ=60)
AGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATT < SRR4302547.3092233/94‑1 (MQ=60)
GACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTT < SRR4302547.6155828/94‑1 (MQ=60)
GACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTT > SRR4302547.1581152/1‑94 (MQ=60)
ACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTC > SRR4302547.4060538/1‑94 (MQ=60)
ACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTC > SRR4302547.4488818/1‑94 (MQ=60)
CAGGAAAACCGATGGCATCGTCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCC > SRR4302547.3746555/1‑94 (MQ=60)
CAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCC > SRR4302547.951553/1‑94 (MQ=60)
AGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCC > SRR4302547.2330094/1‑94 (MQ=60)
AGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCC < SRR4302547.5144153/94‑1 (MQ=60)
GGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCG > SRR4302547.4909782/1‑94 (MQ=60)
GGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCG > SRR4302547.6291634/1‑94 (MQ=60)
GAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGGGCGGCTGG‑CTACGTCCCATTTCCCGC > SRR4302547.3591046/1‑94 (MQ=60)
AACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAA < SRR4302547.4944331/94‑1 (MQ=60)
CCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGA > SRR4302547.2557325/1‑94 (MQ=60)
CGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAA > SRR4302547.1555643/1‑94 (MQ=60)
CGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAA < SRR4302547.4820928/94‑1 (MQ=60)
GATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAAC < SRR4302547.5092342/94‑1 (MQ=60)
GATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAAC > SRR4302547.935625/1‑94 (MQ=60)
GATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAAC < SRR4302547.1010304/94‑1 (MQ=60)
GATGGCAGCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAAC < SRR4302547.3434325/94‑1 (MQ=60)
TGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAG > SRR4302547.2731345/1‑94 (MQ=60)
GGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGC > SRR4302547.6167497/1‑94 (MQ=60)
GGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGC > SRR4302547.1771246/1‑94 (MQ=60)
CATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAA > SRR4302547.5419776/1‑94 (MQ=60)
CATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAA > SRR4302547.1172651/1‑94 (MQ=60)
ATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAG > SRR4302547.1304600/1‑94 (MQ=60)
ATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAG < SRR4302547.3308674/94‑1 (MQ=60)
ATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGA < SRR4302547.732041/94‑1 (MQ=60)
TCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGAT < SRR4302547.1372330/94‑1 (MQ=60)
TCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGAT < SRR4302547.484761/94‑1 (MQ=60)
CGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATT < SRR4302547.6556263/94‑1 (MQ=60)
GCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTG > SRR4302547.2745287/1‑94 (MQ=60)
GCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTG < SRR4302547.795496/94‑1 (MQ=60)
TGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCC < SRR4302547.5542646/94‑1 (MQ=60)
TGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCC < SRR4302547.6107458/94‑1 (MQ=60)
CCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGA < SRR4302547.4428756/94‑1 (MQ=60)
CCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGA < SRR4302547.5320551/94‑1 (MQ=60)
CCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGA < SRR4302547.5676338/94‑1 (MQ=60)
CGCCTCGGTGCGGGCAAATATCATCCTAGCTCTCCAGGCCCAGCGCGGCTAG‑CTACGTCCCATTTCCCGCGCACAACAGCAAGAGACTGCCGAA > SRR4302547.2152215/1‑94 (MQ=60)
CGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAA < SRR4302547.4070695/94‑1 (MQ=60)
CGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAA > SRR4302547.2577660/1‑94 (MQ=60)
CGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTAG‑CTCCGTCCCACTTCCCGCAAAGAACAGCAAGAGGTTGCCGAA < SRR4302547.3236296/94‑1 (MQ=60)
GCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAAC < SRR4302547.2448680/94‑1 (MQ=60)
GCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAAC < SRR4302547.46984/94‑1 (MQ=60)
GCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAAC > SRR4302547.3172286/1‑94 (MQ=60)
CCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACG < SRR4302547.1212777/94‑1 (MQ=60)
CCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACG < SRR4302547.2310066/94‑1 (MQ=60)
CCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACG > SRR4302547.2401496/1‑94 (MQ=60)
CTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGC > SRR4302547.2998220/1‑94 (MQ=60)
CGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTT < SRR4302547.1719731/94‑1 (MQ=60)
GGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCTGAACGCTTT < SRR4302547.6612631/94‑1 (MQ=60)
GGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTT > SRR4302547.1064193/1‑94 (MQ=60)
GTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTA > SRR4302547.1864817/1‑94 (MQ=60)
GTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTA < SRR4302547.6023428/94‑1 (MQ=60)
TGCGGGAAAATATCATCCTCGCTCTCCAGGTCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGCACGCTTTAT > SRR4302547.4990311/1‑94 (MQ=60)
GCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATC < SRR4302547.4621753/94‑1 (MQ=60)
GCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATC > SRR4302547.4772645/1‑94 (MQ=60)
GCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATC < SRR4302547.703150/94‑1 (MQ=60)
CGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCC > SRR4302547.2346545/1‑94 (MQ=60)
CGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCC > SRR4302547.1485433/1‑94 (MQ=60)
CGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCC < SRR4302547.1517766/94‑1 (MQ=60)
CGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCC < SRR4302547.5352864/94‑1 (MQ=60)
GGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCG < SRR4302547.2886580/94‑1 (MQ=60)
AAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCA < SRR4302547.2840686/94‑1 (MQ=60)
AAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCA > SRR4302547.2064233/1‑94 (MQ=60)
AAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCA > SRR4302547.2358002/1‑94 (MQ=60)
AAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAG < SRR4302547.893055/94‑1 (MQ=60)
AATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGC > SRR4302547.2737078/1‑94 (MQ=60)
TATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTT < SRR4302547.6183566/94‑1 (MQ=60)
TATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTT < SRR4302547.5101213/94‑1 (MQ=60)
TATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTT < SRR4302547.1784077/94‑1 (MQ=60)
ATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTG < SRR4302547.6270826/94‑1 (MQ=60)
ATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTG < SRR4302547.6478018/94‑1 (MQ=60)
CACCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGC < SRR4302547.6681308/94‑1 (MQ=60)
ATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCA > SRR4302547.6424121/1‑94 (MQ=60)
ATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCA > SRR4302547.2382225/1‑94 (MQ=60)
ATCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAAAGCTTTATCCGCCAGCTTGGCA > SRR4302547.2979542/1‑94 (MQ=60)
TCCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCAT < SRR4302547.6487978/94‑1 (MQ=60)
CCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATT > SRR4302547.6206239/1‑94 (MQ=60)
CCTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATT < SRR4302547.4018717/94‑1 (MQ=60)
CTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTC < SRR4302547.777709/94‑1 (MQ=60)
CTCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTC > SRR4302547.3904641/1‑94 (MQ=60)
TCGGTCGCCAGGCCCAGCGCGGCTGG‑CTACGTCCTATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCG < SRR4302547.2878011/94‑1 (MQ=60)
TCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCG < SRR4302547.2683205/94‑1 (MQ=60)
TCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCG < SRR4302547.6094873/94‑1 (MQ=60)
TCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCG < SRR4302547.4108528/94‑1 (MQ=60)
TCGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTGCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCG < SRR4302547.3193355/94‑1 (MQ=60)
CGCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGC > SRR4302547.6365020/1‑94 (MQ=60)
GCTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCA > SRR4302547.4450811/1‑94 (MQ=60)
CTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCAC > SRR4302547.5257461/1‑94 (MQ=60)
CTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCAC < SRR4302547.5291471/94‑1 (MQ=60)
CTCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCAC > SRR4302547.3590991/1‑94 (MQ=60)
TCTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGCACGCTTTATCCGCCAGCTTGGCATTCGCACA > SRR4302547.870783/1‑94 (MQ=60)
CTCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACAC > SRR4302547.2380077/1‑94 (MQ=60)
TCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACC > SRR4302547.650684/1‑94 (MQ=60)
TCCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACC > SRR4302547.6359764/1‑94 (MQ=60)
CCAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCT < SRR4302547.2739497/94‑1 (MQ=60)
CCAGGCCCAGCGCGGCT‑GTCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCT < SRR4302547.4042021/94‑1 (MQ=60)
CAGGCCCAGGGAGGCTGG‑CTACGTCCCATTTCCCGACAAGAACAGCAAGAGATTGCCGAACGCTTTATCAGCCAGCTTGGCATTCGCACACCTT > SRR4302547.4353670/1‑94 (MQ=60)
CAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTT > SRR4302547.6585102/1‑94 (MQ=60)
CAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTT < SRR4302547.3569863/94‑1 (MQ=60)
CAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTT > SRR4302547.807791/1‑94 (MQ=60)
CAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTT < SRR4302547.6723487/94‑1 (MQ=60)
CAGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTT > SRR4302547.1905666/1‑94 (MQ=60)
CGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTC < SRR4302547.1783299/94‑1 (MQ=60)
AGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTC < SRR4302547.5238925/94‑1 (MQ=60)
AGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTC < SRR4302547.3346385/94‑1 (MQ=60)
AGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTC > SRR4302547.4155188/1‑94 (MQ=60)
AGGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTC < SRR4302547.3582764/94‑1 (MQ=60)
GGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCA < SRR4302547.6710375/94‑1 (MQ=60)
GGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCA < SRR4302547.4700772/94‑1 (MQ=60)
GGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCA > SRR4302547.5312197/1‑94 (MQ=60)
GGCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCA < SRR4302547.4136737/94‑1 (MQ=60)
GCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAA < SRR4302547.2878461/94‑1 (MQ=60)
GCCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAA < SRR4302547.4303832/94‑1 (MQ=60)
CCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAAC < SRR4302547.1286675/94‑1 (MQ=60)
CCCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAAC < SRR4302547.5780228/94‑1 (MQ=60)
CCAAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTAGCCGCCAGCTTGGCATTCGCACACCTTCAAC < SRR4302547.5419900/94‑1 (MQ=60)
CCAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACT < SRR4302547.3270529/94‑1 (MQ=60)
CAGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTG < SRR4302547.4460077/94‑1 (MQ=60)
AGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGA > SRR4302547.6361931/1‑94 (MQ=60)
AGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGA > SRR4302547.3287962/1‑94 (MQ=60)
AGCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGA < SRR4302547.4015773/94‑1 (MQ=60)
GCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAA < SRR4302547.6380068/94‑1 (MQ=60)
GCGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAA > SRR4302547.2959570/1‑94 (MQ=60)
CGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAAC < SRR4302547.1158809/94‑1 (MQ=60)
CGCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAAC > SRR4302547.252143/1‑94 (MQ=60)
GCGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACA < SRR4302547.1916846/94‑1 (MQ=60)
GCGGCTGG‑CTACGTCCCATTGCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACA < SRR4302547.2147716/94‑1 (MQ=60)
CGGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAA < SRR4302547.822226/94‑1 (MQ=60)
GGCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAAC > SRR4302547.2603015/1‑94 (MQ=60)
GCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACC < SRR4302547.6347230/94‑1 (MQ=60)
GCTGG‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACC < SRR4302547.3521723/94‑1 (MQ=60)
GCTGG‑CTACGGCCCATTTCCCGGAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCAGTGGCAGACCTTCACCTGACCAACC > SRR4302547.3456325/1‑94 (MQ=60)
G‑G‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACCGAT < SRR4302547.1845644/94‑1 (MQ=60)
G‑G‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACCGAT > SRR4302547.1407132/1‑94 (MQ=60)
G‑G‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACCGAT > SRR4302547.1550743/1‑94 (MQ=60)
G‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACCGATT < SRR4302547.6651921/94‑1 (MQ=60)
G‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACCGATT < SRR4302547.938238/94‑1 (MQ=60)
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GCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑G‑CTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACCGATT > NC_000913/4449645‑4449831
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |