Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F36 I0 R1
|
107 |
8366.7 |
6299831 |
98.3% |
6192733 |
135.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| JC |
NZ_CP022686 |
2,590,563 |
+TTGG |
100% |
coding (109/153 nt) |
CIW80_RS26455 → |
hypothetical protein |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NZ_CP022686 |
= 2590563 | 3 (0.020) | 170 (1.260)
+TTGG |
75/238 |
NT |
98.3% |
coding (109/153 nt) |
CIW80_RS26455 |
hypothetical protein |
| ? | NZ_CP022686 |
2590564 = |
3 (0.020) | coding (110/153 nt) |
CIW80_RS26455 |
hypothetical protein |
Only 100 of 196 total aligned reads displayed.
ATTTTGGGAGAACAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP022686/2590427‑2590563
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCGTTTATACG > NZ_CP022686/2590564‑2590698
||||
ATTTTGGGAGACCAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTG < 7:55461/140‑1
ATTTTGGGAGAACAGGACTGTCCCCACTAAGACAACACAGCAAGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATT < 3:192134/138‑1
aTTTGGGAGAACAGGACTGGCCCCACTATGATAACACAGAATGCTCATCATGACCGCATGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGTCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGTATTT < 4:93152/137‑1
TTTTGGGAGAACAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGATTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGt > 7:416194/1‑139
TTTGGGAGAACAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGT < 7:442234/140‑1
TTTGGGAGAACAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTG < 2:92929/138‑1
TTTGGGAGAACAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTG < 4:412904/138‑1
TGGGAGAACAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGT > 7:237744/1‑140
cGAAAAGGACTCTCCCCACTATGAAAACCCAGCATTATCATCATGACCGCCTGTCTGTCAGGCTAGCAGTCATTATCAGCGGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGGCT < 1:23525/137‑1
AGAACAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCT < 3:141346/138‑1
ttgagttCTGTCCCAACTATGATAACTAAGTATGATCTTCATGACCGCATGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTTCTGGCTGGTGAATCTCTGGAGCTTAAAGTTTTAGCTGATGAATTTGGTGTCTCAGA < 6:450459/133‑1
AACAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGA < 5:430225/140‑1
AACAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCA < 3:94532/138‑1
AGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCAGTCTGTCAGGCTATCAGTCTTTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTTGCTGATGAATTTGGTGTCTCAGAACG < 8:741115/140‑1
taCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGATTAAAGTATTAGATTAAGAATTTGGTGTCTCATAACTCACCCTA > 6:568373/3‑140
TCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTTGTGTCTCAGAACGCCCCCTA > 7:495171/1‑140
TCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTA > 6:506611/1‑140
TCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTA > 7:290033/1‑140
TCCACACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGTCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGTTGTCTCATAACGCACCCTA > 8:252974/1‑140
CCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTA < 3:233395/138‑1
CCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCACAGAACGCACCCTA > 1:128324/1‑138
CCCACTATGAAAACACAGCAAGATCATCATGACCGCCTGTCTGTCAGGCTCTCAGTCATTATCAGCCGCTTACTGGCTGGTGACTCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGACCGCACCCTA > 4:65478/1‑138
ACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCG > 7:456036/1‑140
ACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAG < 4:134992/138‑1
ACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTG < 6:96196/115‑1
ACTATGAAAACACAGCAAGATCATCATGACCGCCTGGCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCG < 6:147318/140‑1
TATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAG < 2:796321/136‑1
GAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGTCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATT > 5:456444/1‑140
GAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATT > 6:470104/1‑140
AAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATT > 3:294390/1‑138
cCAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTTCTGGCTGGTGAATCTCTGGAGCGTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCA < 1:102236/137‑1
ACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGC < 5:499961/140‑1
ACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCA < 2:599301/138‑1
CAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGATTAAAGTATTAGCTGATGAATTTGGTGTCGAAGAACGCACCCTACAGCGGGATTTTCAGCA > 5:397440/1‑140
GCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAATTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCA > 1:181643/1‑138
GCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCTGCAAC > 6:268823/1‑140
GCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCA > 2:469939/1‑138
ATGATCATCATGACCGCCTGTCTGTGAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAAC < 2:687451/138‑1
cCATCATGACCGCCTGTCGGTCAGGCTATCCGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGGCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGA < 8:587898/139‑1
TCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGA < 6:101662/140‑1
TCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGA < 5:310537/140‑1
ATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATC < 6:54903/140‑1
TCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCC > 8:174695/1‑140
ATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCC > 3:257244/1‑138
GACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCT < 5:664672/140‑1
GACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCACCAACGCCTGATCCAT > 1:245373/1‑138
CCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGC > 7:220623/1‑119
TGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTGAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATC > 3:558717/1‑138
TCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTCCAGCGGGATTTTCAGCACCGCCTGATCCCTCTGGAACTT > 3:67310/1‑138
TCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGC < 3:388341/138‑1
TCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGG < 7:247992/140‑1
TCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGG > 5:766657/1‑140
TCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGC < 2:625158/138‑1
TCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAAATTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCCGCAACTCCTGAGCCATCTGGATCTTGAGCATCGCAGCGG > 8:361659/1‑140
CAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCG < 2:228504/138‑1
TCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGT < 7:92468/140‑1
ATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGT < 1:570706/138‑1
TTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTAC < 7:629747/140‑1
TATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTTTTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGAGCTTGAGCATCGCAGCGGAAGTTACC < 6:742176/140‑1
CCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTGACCGACTTA > 7:600358/1‑140
CCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTA > 5:151570/1‑73
GCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTA > 3:684194/1‑138
GCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTA > 3:480351/1‑138
GCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTATCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTTCCGACTTA > 1:487962/1‑138
TACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCC > 4:34869/1‑138
ACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGAGTTTCAGCAACGCCTGATCCATCTGGATCTTGCGCATCGCAGCGGAAGTTACCGCCTTATCCG > 3:743294/1‑138
tTGGCTTGTGAATCTCTGGAGCTTAATGTATTAGCTGATGAATTTGGTGTCTCAGAACGGACGCTTCAGCGGGATTTTCAGCAACGCGTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTTCCGACTTATCCGCCA < 5:590871/139‑1
GGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAA < 5:454064/140‑1
GGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAA < 7:138678/140‑1
GGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCA < 1:407694/138‑1
GGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAAATTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAA < 6:387631/140‑1
TGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGG > 1:346659/1‑138
ATCTCTGGAGCTTACAGTATTAGCTGATGAATTTGGTGTCTCCGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCG < 1:622195/138‑1
ATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGG < 7:174695/140‑1
ATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCG < 2:166086/138‑1
ATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCG < 3:261941/138‑1
ATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGGCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGG < 8:687309/140‑1
CTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAG > 4:582431/1‑138
TGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCAC < 8:617843/140‑1
TGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGC < 2:380690/138‑1
TGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGC < 1:755919/138‑1
GGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACT > 5:735238/1‑140
GAGCTTAAAGTATTAGCTGATGAAATTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACTCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCCCTT > 7:423657/1‑140
AGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCACCGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACT > 1:776713/1‑138
AGCTTAAAGTATTAGCTGATGAATTTGGTGGCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCAGCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTA < 6:218779/140‑1
CTTAAAGTATTAGCTGATGAATTTGGTGTCGCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACC < 8:437563/140‑1
TAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCA > 5:542841/1‑140
TAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCA > 6:16623/1‑140
TAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACC < 3:582256/138‑1
AAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCC < 3:451838/138‑1
AGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATA > 6:292871/1‑140
TTAGCAGAAGAATTTTGTGTCGCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTTAGCATCGCAGCGGAAGTTACCGACTTATCCTCCATACCGGCCGGGAGCACTTACCCAATACA < 4:61433/138‑1
TAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTT > 8:393206/1‑140
GCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTT > 3:399376/1‑138
ATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCGTTT > 7:727047/1‑140
ATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCGTTT > 5:242992/1‑140
TGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCGTTTA > 8:128419/1‑140
TTTGGTGTCTCCGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATACATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCGTTTATACG < 7:392636/140‑1
TTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCGTTTATACG < 8:536710/140‑1
TTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCGTTTATA < 4:516028/138‑1
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ATTTTGGGAGAACAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP022686/2590427‑2590563
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCGTTTATACG > NZ_CP022686/2590564‑2590698
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
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| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
