Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F35 I0 R1
|
195 |
10216.4 |
8585726 |
98.3% |
8439768 |
135.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,502,553 |
A→C |
27.0% |
I539S (ATC→AGC) |
selB ← |
selenocysteine‑specific translation elongation factor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,502,553 | 0 | A | C | 27.0%
| 224.3
/ 124.6
| 186 | I539S (ATC→AGC) | selB | selenocysteine‑specific translation elongation factor |
| Reads supporting (aligned to +/- strand): ref base A (69/67); new base C (20/30); total (89/97) |
| Fisher's exact test for biased strand distribution p-value = 2.47e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.41e-01 |
Only 100 of 187 total aligned reads displayed.
TGAATTGCCAGCTTGCGGCCTACGCCTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCTCGTCACCAAACAGCGGCTCTGCTTTTTGCCAGATG > NZ_CP022686/2502415‑2502690
|
tGAATTGCCAGCTTGCGGCCTACGCCTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGAt < 4:777497/140‑1 (MQ=255)
tGAATTGACAGATTGCGGCCTACGCCTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCTATCGATACGTTAATAACGATCTTTGACGAt > 4:463914/1‑140 (MQ=255)
aaTTGCCAGCTTGCGGCCTACGCCTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCg < 3:272261/140‑1 (MQ=255)
tGCCAGCTTGCGGCCTACGCCTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAg < 3:519740/140‑1 (MQ=255)
tGCCAGCGTGCGGCGGACGCCTAAGCGATCGCGGAAGGCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGc < 5:89592/138‑1 (MQ=255)
cAGCTTGCGGCCTACGCCTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTaa < 1:639616/140‑1 (MQ=255)
cAGCTTGCGGCCTACGCCTAAGCGATCGCGGAAATCAGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATATCGATCTTTGACGATCGCAGTaa > 7:767139/1‑140 (MQ=255)
gCTTGCGGCCTACGCCTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAAtt < 2:787920/140‑1 (MQ=255)
tGCGGCCTACGCCTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATc < 1:245252/140‑1 (MQ=255)
tGCGGCCTACGCCTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATc < 2:82579/140‑1 (MQ=255)
gCGGCCTACGCCTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATcc < 3:163618/140‑1 (MQ=255)
cTACGCCTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCt > 6:586475/1‑138 (MQ=255)
cGCCTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTgg > 8:688536/1‑140 (MQ=255)
gCCTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTg < 5:773970/138‑1 (MQ=255)
gCCTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGCTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTggg < 1:1112795/140‑1 (MQ=255)
ccTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTgg > 6:210840/1‑138 (MQ=255)
aaGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGgccgc < 7:318824/140‑1 (MQ=255)
aaGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGgccgc < 1:978846/140‑1 (MQ=255)
aGCGATCGCGGAAATCCGCCGCGCTGGTTTAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGTTAATAACGATCTTTGACGATCGCAGTTATTATCCCCTGTTGGgccg < 5:313861/138‑1 (MQ=255)
aGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGgccgcc < 4:111235/140‑1 (MQ=255)
aGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGgccgcc > 7:1013912/1‑140 (MQ=255)
aGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGgccgcc > 8:896161/1‑140 (MQ=255)
aGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATAATCCCCTGTTGGgccgcc > 7:711609/1‑140 (MQ=255)
cGATCGCGGAAATCCGCCGCGCAGGTTGACCCGCATTCCTGCTCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGgccgac > 5:933855/1‑136 (MQ=255)
aTCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGc > 7:439501/1‑140 (MQ=255)
tCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCg > 3:420424/1‑140 (MQ=255)
tCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCg > 8:25009/1‑140 (MQ=255)
cgcgGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGt > 4:724684/1‑140 (MQ=255)
cgcgGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGt > 1:644821/1‑140 (MQ=255)
cgcgGAAATCCGCCGCGCAGGTTGAACCGCATTACTGATCGAGATCGCGGATAATATTGGCAAATTCGACAATCCGATCGTTACGGTAATATCGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCGGGCgg > 2:1112639/1‑139 (MQ=255)
gcgGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTa < 4:500962/140‑1 (MQ=255)
aTCCGCCGCGCAGGTTGAACCGCATTCCTGATCGCGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCa < 3:145106/140‑1 (MQ=255)
aTCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCa < 1:672933/140‑1 (MQ=255)
aTCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCa < 2:649058/140‑1 (MQ=255)
cgcgCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCa < 1:409062/140‑1 (MQ=255)
cAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGc < 8:392333/140‑1 (MQ=255)
gTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGcc < 6:371246/138‑1 (MQ=255)
gTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTg > 2:159307/1‑140 (MQ=255)
aCCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGAAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGGAGCGTCAGGCGCATTGCCTGCtcgt < 3:72434/140‑1 (MQ=255)
aCCGCATTCCTGAGCGAGATCGCGGATCATATTGGCAACTTCGACAATCCGATCGTTACGGTAATTACGATCTTTGACGATCGGAGTAATTATCACCGGTTGGTCCGACTGGCGTAGCGTCCGGCGCATTGCCTGCtcgt > 8:296072/1‑140 (MQ=255)
aTTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTTGTCGGtt > 8:1001095/1‑140 (MQ=255)
aTTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGtt > 4:345842/1‑140 (MQ=255)
aTTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGtt > 7:797302/1‑140 (MQ=255)
ccTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGGCGGTTc < 6:281346/138‑1 (MQ=255)
tGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGt < 8:161778/140‑1 (MQ=255)
tGATCGAGATCGCGGATCATATTGGCAAATTAGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGt < 2:378879/140‑1 (MQ=255)
gATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGATCGTCGGTTCCCGtc > 2:965577/1‑140 (MQ=255)
aTCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCAGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCACGTCGGTTCCCGtct > 8:967503/1‑140 (MQ=255)
cGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTctct > 2:427397/1‑140 (MQ=255)
cGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTGGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTctct > 7:380/1‑140 (MQ=255)
agagaTCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATGATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGTCGCATTGCCTGATCGTCGGTTCCCGtctcg > 3:831960/2‑139 (MQ=255)
gaTCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCtttt > 3:1008253/1‑140 (MQ=255)
gaTCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCtgtt > 8:627111/1‑140 (MQ=255)
tCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGc > 8:34575/1‑140 (MQ=255)
tCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTgg > 4:494223/1‑139 (MQ=255)
tCGCGGATCATATTGGCAAATACGACAATCCGATCGTTACGGTAATAACGAACTTTCACGATCGCAGGAATTATACCCTGGTGGGCCGCCTGGCGTAGCGACAGGCGCCTTGCCTGCTCGTCGGTTCCCGTCTCtttt > 5:947792/1‑138 (MQ=255)
cgcgGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGcc < 8:580565/140‑1 (MQ=255)
cgcgGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGcc < 3:116010/140‑1 (MQ=255)
cgcgGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTg < 6:941421/138‑1 (MQ=255)
cgcgGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGcc < 3:749136/140‑1 (MQ=255)
gATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGTTTCCCGTCTCTTTTGCCAg > 5:878667/1‑138 (MQ=255)
tCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTTAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCa < 4:629650/140‑1 (MQ=255)
tCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCa < 7:732282/140‑1 (MQ=255)
tCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATAGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGt < 5:197068/138‑1 (MQ=255)
tatTGGCAAATTCGACAATCCGATCGTTACTTTAATAACGATCTTTGACGATCTCAGTAATTATCCCATGTTGGGCCCCCTGGCGTCGCGTCAGGCGCATTGCCTGCTCGTCGGTTACCGTCTCTTTTTCAAGTTCaa > 5:438960/1‑137 (MQ=255)
atTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGca < 7:821824/140‑1 (MQ=255)
tGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGca < 5:471058/138‑1 (MQ=255)
ggCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGcaccc > 8:735194/1‑140 (MQ=255)
cAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGcccccac > 2:302785/1‑140 (MQ=255)
cAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGcacccac > 3:219867/1‑140 (MQ=255)
cGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCAAGCGACCACCATg > 6:796676/1‑138 (MQ=255)
gACACTCCGATCGTTACGGTAATAACGATCTTTGACGCGCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCGGCTCGTCGGTTCCCGTCTCTTTTGCCAGGGCACGCACCCACCATgg < 6:110196/138‑1 (MQ=255)
gACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATgg < 5:696644/138‑1 (MQ=255)
gACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTAGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCt < 8:17864/140‑1 (MQ=255)
gACAATCCAATCGTTACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCt < 2:416714/140‑1 (MQ=255)
aCAATCCGATCGTTACCGTAATAGCGATCTTTGACGCTCGATGTAATTATCCCCTGTTGGGCCGCCTGGCGTATCTTCAGGCGCATTGCCGTCTCGTCGGGTCTCGTCTATTTTTCCAGGACACGCCCGCACCATGGCta > 8:114685/1‑139 (MQ=255)
cAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCTCg < 1:219998/140‑1 (MQ=255)
cAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTGTTGCCAGGTCACGCACCCACCATGGCTCg > 3:258689/1‑140 (MQ=255)
tCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACccacca < 7:262647/125‑1 (MQ=255)
tCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACccacca > 8:262647/1‑125 (MQ=255)
tCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCTCGTCACCaaa > 8:204460/1‑140 (MQ=255)
ttACGGTAATAACGATCTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCTCGTCACCAAACAg < 7:386835/140‑1 (MQ=255)
tACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGGTCCCGTGTCTTTTGCCAGGTCACGCACCCCCCATGGCTCGTCACCAAACAGc > 8:500131/1‑140 (MQ=255)
aCGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCAGCTCGTCGGATCCCGTCTCATTTGCCAGGTCACGCACCCACACTGGCTCGACACCATACAGCg > 4:79688/1‑140 (MQ=255)
aataaCGATCTTTGCCGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCTCGTCACCAAACAGCGGctcg > 8:96303/1‑139 (MQ=255)
aaCGATCTTTGACGATCGCAGTAATTATCCCCGGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGGCGGTTCCCGGCTCTTTTGCCAGGTCACGCACCCACCATGGCTCGTCACCAAACAGCGGCTCTg < 6:517741/138‑1 (MQ=255)
aTCTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCTCGTCACCAAACAGCGGCTCTGCttttt > 4:460886/1‑140 (MQ=255)
aTCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCCCCCACCATGGCTCGTCACCAAACAGCGGCTCTGCttttt > 2:1053729/1‑140 (MQ=255)
aTCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCTCGTCACCAAACAGCGGCTCTGCttttt > 3:689469/1‑140 (MQ=255)
aTCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCTCGTCACCAAACAGCGGCTCTGCttttt > 4:997115/1‑140 (MQ=255)
cTTTGACGCTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCCTGGCTCGTCACCAAACAGCGGCTCTGCTTTTTGc > 7:212443/1‑140 (MQ=255)
cTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCCCCCACCATGGCTCGTCACCAAACAGCGGCTCTGCTTTTTGc > 7:682332/1‑140 (MQ=255)
gACGCTCGCAGTAATTATCCCCTTTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGGCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCTCGTCACCAAACAGCGGCTCTGCTTTTTGCCAGa < 1:1012052/140‑1 (MQ=255)
gACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCATGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGGCCCGCACCCACCATGGCTCGTCACCAAACAGCGGCTCTGCTTTTTGCCAGa < 3:704914/140‑1 (MQ=255)
gACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCTCGTCACCAAACAGCGGCTCTGCTTTTTGCCAGa < 1:778734/140‑1 (MQ=255)
gACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCTCGTCACCAAACAGCGGCTCTGCTTTTTGCCAGa < 4:379845/140‑1 (MQ=255)
gACGATCGCAGTAATTATCCCCTGTTGGGCCGCCGGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGCTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCTCGTCACCAAACAGCGGCTCTGCTTTTTGCCa < 6:221848/138‑1 (MQ=255)
gACGATCGCAGTAATTATCCCCTGTGTGGGCGCCTGGCGGAGCGTCAGGCGCATTGCCTGCGCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCTCGTCACCAAACAGCGGCTCTGCTTTTTGCCa < 6:458822/138‑1 (MQ=255)
cGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCTCGTCACCAAACAGCGGCTCTGCTTTTTGCCAGa < 6:680776/138‑1 (MQ=255)
aTCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGGCACGCACCCACCATGGCTCGTCACCAAAAAGCGGCGCTGCTTTTTGCCAGATg > 5:1002035/1‑138 (MQ=255)
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TGAATTGCCAGCTTGCGGCCTACGCCTAAGCGATCGCGGAAATCCGCCGCGCAGGTTGAACCGCATTCCTGATCGAGATCGCGGATCATATTGGCAAATTCGACAATCCGATCGTTACGGTAATAACGATCTTTGACGATCGCAGTAATTATCCCCTGTTGGGCCGCCTGGCGTAGCGTCAGGCGCATTGCCTGCTCGTCGGTTCCCGTCTCTTTTGCCAGGTCACGCACCCACCATGGCTCGTCACCAAACAGCGGCTCTGCTTTTTGCCAGATG > NZ_CP022686/2502415‑2502690
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
