Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F5 I102 R1
|
278 |
39.1 |
2251254 |
95.8% |
2156701 |
87.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NZ_CP009273 |
858,772 |
T→C |
I66V (ATT→GTT) |
ybiY ← |
glycyl‑radical enzyme activating protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP009273 | 858,772 | 0 | T | C | 100.0%
| 197.5
/ NA
| 53 | I66V (ATT→GTT) | ybiY | glycyl‑radical enzyme activating protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (26/27); total (26/27) |
GTGTCGGACAGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAT‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATACAGCAGATCCTGCGTGCGGGCG > NZ_CP009273/858685‑858854
|
gtgtCGGACAGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CAc > 2:670773/1‑91 (MQ=255)
gtgtCGGACAGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CAc > 2:555593/1‑91 (MQ=255)
gtgtCGGACAGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CAc > 2:673359/1‑91 (MQ=255)
gtgtCGGACAGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CAc > 2:257990/1‑91 (MQ=255)
gtgtCGGACAGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CAc > 1:761443/1‑91 (MQ=255)
ggACAGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCg > 2:308239/1‑91 (MQ=255)
agcagTCGTTTAACGCCGTCAGATGCCCGGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGgcgc < 1:916035/91‑1 (MQ=255)
agcagTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGgcgc < 1:780240/91‑1 (MQ=255)
agcagTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGgcgc < 2:491206/91‑1 (MQ=255)
agcagTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGgcgc < 2:1096000/91‑1 (MQ=255)
agcagTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGgcgc < 2:707359/91‑1 (MQ=255)
gcagTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGcgcg < 1:888927/91‑1 (MQ=255)
gcagTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGcgcg < 1:42060/91‑1 (MQ=255)
gcagTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGcgcg > 2:1095734/1‑91 (MQ=255)
gcagTCCGTTAACGCCGTCAGCTGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGcgcg < 2:172490/91‑1 (MQ=255)
agTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGc > 1:19023/1‑91 (MQ=255)
tAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAgcg < 1:127931/91‑1 (MQ=255)
aaCGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAgcgc > 1:505266/1‑91 (MQ=255)
aaCGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAgcgc > 1:544951/1‑91 (MQ=255)
aaCGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAgcgc < 1:402672/91‑1 (MQ=255)
cGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGcac < 1:569928/91‑1 (MQ=255)
cGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGcac < 2:835539/91‑1 (MQ=255)
cGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGcac < 2:761443/91‑1 (MQ=255)
gCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGcaca < 1:40754/91‑1 (MQ=255)
cGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGc > 2:411409/1‑91 (MQ=255)
cGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGc > 2:1026520/1‑91 (MQ=255)
aTGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAg < 1:308239/91‑1 (MQ=255)
cTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCt > 1:115559/1‑91 (MQ=255)
cTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCt > 2:243326/1‑91 (MQ=255)
ccGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGc < 1:145984/67‑1 (MQ=255)
ccGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGc > 2:145984/1‑67 (MQ=255)
ccGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTc < 1:673359/91‑1 (MQ=255)
ccGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTc < 1:488693/91‑1 (MQ=255)
tAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGacac > 1:1015999/1‑91 (MQ=255)
tAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGacac < 2:218647/91‑1 (MQ=255)
tAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGacac > 1:1068653/1‑91 (MQ=255)
tAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGacac > 1:843324/1‑91 (MQ=255)
tAACTTTTCCCGATGAATAACCAACCCATTACGCGC‑CGCCCCATGCCCTCCCGGCGCGGCCTTAGAGCCCAGCTCGCAGCCTTGCAGacac < 2:923377/91‑1 (MQ=255)
tttCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCg < 2:1098445/91‑1 (MQ=255)
tttCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCg < 1:1095734/91‑1 (MQ=255)
cGATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGt < 2:70309/91‑1 (MQ=255)
gATGAATAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTc > 1:641366/1‑91 (MQ=255)
aTAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGcc < 2:332451/65‑1 (MQ=255)
aTAAGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGcc > 1:332451/1‑65 (MQ=255)
aaGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATAcagc < 2:1068653/91‑1 (MQ=255)
aaGCAAACCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATAcagc < 2:1022101/91‑1 (MQ=255)
aaaCCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATACAGCAGAt > 1:1016818/1‑91 (MQ=255)
aCCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGc < 1:835530/36‑1 (MQ=255)
aCCATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGc > 2:835530/1‑36 (MQ=38)
cATTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATACAGCAGATCCtg > 2:1000721/1‑91 (MQ=255)
aTTCAGCGCGCGCTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATACAGCAGATCCtgc > 1:336943/1‑91 (MQ=255)
tCAGCGCGCGCTCAAC‑CCCTGGCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACTCAGTCGTGCGTCATAAAGCAGATCCtgcgt < 2:801342/91‑1 (MQ=255)
gcgcgcTCAAC‑CACTTCCGGCGCGGCCTTCGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATACAGCAGATCCTGCGTGCggg > 2:426176/1‑91 (MQ=255)
cgcgcTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCg > 2:730828/1‑61 (MQ=255)
cgcgcTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCg < 1:730828/61‑1 (MQ=255)
gcgcTCAAC‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATACAGCAGATCCTGCGTGCGGgcg > 1:664645/1‑91 (MQ=255)
|
GTGTCGGACAGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAAT‑CACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATACAGCAGATCCTGCGTGCGGGCG > NZ_CP009273/858685‑858854
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGTTAATGCCTGTGTCGGACAGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAATCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTG > NZ_CP009273/858673‑858871
|
CGGTTAATGCCTGTGTCGGACAGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACC < SRR3722125.971823/101‑1 (MQ=60)
CGGTTAATGCCTGTGTCGGACAGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACC > SRR3722125.302931/1‑101 (MQ=60)
GTTAATGCCTGTGTCGGACAGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCAC > SRR3722125.777936/1‑101 (MQ=60)
GCCTGTGTCGGACAGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGG < SRR3722125.323901/101‑1 (MQ=60)
GTCGGACAGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGC > SRR3722125.19371/1‑101 (MQ=60)
AGCAGTCGTTTAACGCCGTCAGATGCCCGGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCG < SRR3722125.936349/101‑1 (MQ=60)
AGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCG < SRR3722125.797230/101‑1 (MQ=60)
AGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCG < SRR3722125.513209/101‑1 (MQ=60)
GCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGC < SRR3722125.42811/101‑1 (MQ=60)
GCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGC < SRR3722125.908596/101‑1 (MQ=60)
GCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGC > SRR3722125.556589/1‑101 (MQ=60)
GCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGC > SRR3722125.515975/1‑101 (MQ=60)
tgtataagagacagGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCAC < SRR3722125.148762/87‑1 (MQ=60)
gatcatgcctagtctcgtgggctcggagatgtgtataagagacagGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCAC < SRR3722125.853894/56‑1 (MQ=60)
TAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGC < SRR3722125.130338/101‑1 (MQ=60)
AACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCA < SRR3722125.411130/101‑1 (MQ=60)
CGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGC < SRR3722125.582115/101‑1 (MQ=60)
GCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCC < SRR3722125.41479/101‑1 (MQ=60)
CCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCT > SRR3722125.117732/1‑101 (MQ=60)
ATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGAC < SRR3722125.314567/101‑1 (MQ=60)
GCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACAC > SRR3722125.861877/1‑101 (MQ=60)
GCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACAC > SRR3722125.1092743/1‑101 (MQ=60)
GCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACAC > SRR3722125.1038730/1‑101 (MQ=60)
CCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGT < SRR3722125.687862/101‑1 (MQ=60)
CCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGT < SRR3722125.499014/101‑1 (MQ=60)
AACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTC > SRR3722125.655192/1‑101 (MQ=60)
gagatgtgtataagagacagCCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATAC < SRR3722125.746565/81‑1 (MQ=60)
TTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATAC < SRR3722125.1120399/101‑1 (MQ=60)
TTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACctgtctcttatacaca > SRR3722125.339334/1‑85 (MQ=60)
ATGAATAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATACAGCAGAT > SRR3722125.1039580/1‑101 (MQ=60)
TAAGCAAACCATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATACAGCAGATCCTGC > SRR3722125.343949/1‑101 (MQ=60)
CATTCAGCGCGCGCTCAACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATACAGCAGATCCTGCGTGCGGGCG > SRR3722125.678962/1‑101 (MQ=60)
ACCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTG > SRR3722125.273765/1‑101 (MQ=60)
|
CGGTTAATGCCTGTGTCGGACAGCAGTCGGTTAACGCCGTCAGATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAGCGCGCGCTCAATCACTTCCGGCGCGGCCTTAGCGCACAGCTCGCAGCCTTCCAGACACAGTCGTGCGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTG > NZ_CP009273/858673‑858871
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
