Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
343 |
268.7 |
10873516 |
97.0% |
10547310 |
150.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP009974 |
4,537,135 |
C→G |
L96L (CTG→CTC) |
RPPX_20270 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009974 | 4,537,135 | 0 | C | G | 100.0%
| 77.4
/ NA
| 33 | L96L (CTG→CTC) | RPPX_20270 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (19/14); total (19/14) |
GCAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACC > CP009974/4536988‑4537166
|
gcAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAgg > 1:1994011/1‑151 (MQ=255)
gcAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAgg > 1:578167/1‑151 (MQ=255)
aGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCGGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTCCTGCCGGGGGGAGGCa > 2:2756843/1‑151 (MQ=255)
aGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCa > 1:2628271/1‑151 (MQ=255)
gATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAg > 1:1886982/1‑151 (MQ=255)
aTGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGa > 2:1534799/1‑151 (MQ=255)
tGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGAt > 2:4736345/1‑151 (MQ=255)
tGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGAt > 2:290011/1‑151 (MQ=255)
gCCATACCCGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGACCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATg < 2:5237917/151‑1 (MQ=255)
gCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATg < 2:3286991/151‑1 (MQ=255)
ccATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATgg < 1:1402505/151‑1 (MQ=255)
ccATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGGGAGGCAGATgg > 2:3259880/1‑151 (MQ=255)
aTACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCg > 1:1460668/1‑151 (MQ=25)
aTACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCg < 2:408391/151‑1 (MQ=255)
tACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGt < 1:3121326/151‑1 (MQ=16)
tACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGt < 1:868632/151‑1 (MQ=19)
tACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGt < 2:363728/151‑1 (MQ=255)
aCCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTg > 1:3883433/1‑151 (MQ=21)
aCCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTg < 2:3736077/151‑1 (MQ=255)
gcaggagAGGGCGACGGTCAGGTTGGAGGGGCACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCAGTTCACCGGGCGCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGc < 2:4458608/150‑1 (MQ=11)
cagcagAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCa < 2:503933/151‑1 (MQ=18)
agcagAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAg > 1:840767/1‑151 (MQ=18)
agcagAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAg > 1:1690204/1‑151 (MQ=18)
gcagAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGt > 1:1190226/1‑151 (MQ=16)
gcagAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGt > 2:285286/1‑151 (MQ=18)
agagGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTgg > 2:3504514/1‑151 (MQ=17)
gagGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGc < 1:2883896/151‑1 (MQ=12)
gagGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGc < 2:1139526/151‑1 (MQ=9)
agGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCt > 1:1913058/1‑151 (MQ=9)
agGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCt > 1:2351626/1‑151 (MQ=9)
gggCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCCGATGGCGTGCAGTGGCtt > 2:4838059/1‑151 (MQ=9)
gggCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCtt < 1:432094/151‑1 (MQ=11)
gtaaGGTTGGAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGccacc < 2:1538798/148‑1 (MQ=2)
|
GCAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACC > CP009974/4536988‑4537166
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTTGCTGTCGATC > CP009974/4536988‑4537285
|
GCAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGG > SRR10918230.580229/1‑151 (MQ=41)
GCAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGG > SRR10918230.2002437/1‑151 (MQ=41)
AGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCA > SRR10918230.2639715/1‑151 (MQ=37)
GATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAG > SRR10918230.1895002/1‑151 (MQ=35)
CCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGG < SRR10918230.1408807/151‑1 (MQ=27)
ATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCG > SRR10918230.1467184/1‑151 (MQ=22)
TACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGT < SRR10918230.872052/151‑1 (MQ=20)
TACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGT < SRR10918230.3134917/151‑1 (MQ=20)
ACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTG > SRR10918230.3900402/1‑151 (MQ=20)
AGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAG > SRR10918230.1697586/1‑151 (MQ=11)
AGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAG > SRR10918230.844021/1‑151 (MQ=11)
GCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGT > SRR10918230.1195370/1‑151 (MQ=9)
GAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGC < SRR10918230.2896443/151‑1 (MQ=5)
AGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCT > SRR10918230.2361656/1‑151 (MQ=3)
AGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCT > SRR10918230.1921178/1‑151 (MQ=3)
GGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTT < SRR10918230.433588/151‑1 (MQ=1)
CGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCA < SRR10918230.5306077/151‑1 (MQ=0)
GGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCAC > SRR10918230.3097296/1‑151 (MQ=0)
GTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACC > SRR10918230.3058446/1‑151 (MQ=0)
GGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTT < SRR10918230.4878635/151‑1 (MQ=0)
AGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGCTGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTC > SRR10918230.577152/1‑151 (MQ=0)
AGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTC > SRR10918230.2985321/1‑151 (MQ=0)
GGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCA < SRR10918230.1591783/151‑1 (MQ=0)
GGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCAC < SRR10918230.484972/151‑1 (MQ=0)
AACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGG > SRR10918230.4471198/1‑151 (MQ=0)
AACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGG < SRR10918230.1368756/151‑1 (MQ=0)
ACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGG < SRR10918230.1207396/151‑1 (MQ=0)
CGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGG > SRR10918230.708189/1‑151 (MQ=0)
GGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGG > SRR10918230.5312419/1‑151 (MQ=0)
GCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGA < SRR10918230.5265625/151‑1 (MQ=0)
GCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGA < SRR10918230.1304675/151‑1 (MQ=0)
CCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGT > SRR10918230.2415460/1‑151 (MQ=0)
GAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTG > SRR10918230.571654/1‑151 (MQ=0)
ACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTC > SRR10918230.1415070/1‑151 (MQ=0)
CGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCC > SRR10918230.3788546/1‑151 (MQ=0)
GCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGG < SRR10918230.2228612/151‑1 (MQ=0)
GCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGG < SRR10918230.1358751/151‑1 (MQ=0)
CAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGG > SRR10918230.3270502/1‑151 (MQ=0)
ATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCC < SRR10918230.2594528/151‑1 (MQ=0)
TGCCAGTTCTTCTTGCCCTGCCTTTCACCCGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCCCCGGGCGGGGGGAGTTTGTCCGGGCCGT < SRR10918230.124435/151‑1 (MQ=0)
GCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTG < SRR10918230.4294735/151‑1 (MQ=0)
CAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGT < SRR10918230.3427437/151‑1 (MQ=0)
AGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTC < SRR10918230.4350265/151‑1 (MQ=0)
TCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCAT < SRR10918230.5381461/151‑1 (MQ=0)
CTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATG > SRR10918230.1054288/1‑151 (MQ=0)
TTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGA < SRR10918230.2218854/151‑1 (MQ=0)
TTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAA > SRR10918230.2739905/1‑151 (MQ=0)
TTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAG > SRR10918230.2704470/1‑151 (MQ=0)
GCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGG < SRR10918230.4742110/151‑1 (MQ=0)
GCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGG < SRR10918230.4743845/151‑1 (MQ=0)
cgtgtgctcttccgaTCTGCCGGGGTCAGGCAGATGGCGTGCAGTTGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCG < SRR10918230.1896274/136‑1 (MQ=0)
cgtgtgctcttccgaTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCG < SRR10918230.1896474/136‑1 (MQ=0)
GTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGT > SRR10918230.2734339/1‑151 (MQ=0)
AGCCAGGCTTCTGCCGGGGGGAGGCAGATGGCGTGCAGTGGCTTGTGCGACCAGTTGGGTTCACCGGGCGGGGGGAGGTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGG < SRR10918230.3009602/151‑1 (MQ=0)
GCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGT > SRR10918230.4889742/1‑151 (MQ=0)
GCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGT > SRR10918230.4178556/1‑151 (MQ=0)
GCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGT > SRR10918230.4129738/1‑151 (MQ=0)
CCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTG > SRR10918230.1671685/1‑151 (MQ=0)
CCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTG > SRR10918230.4392600/1‑151 (MQ=0)
CAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGG > SRR10918230.4099974/1‑151 (MQ=0)
CTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTC > SRR10918230.1248346/1‑151 (MQ=0)
CGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTTGCTG < SRR10918230.956434/151‑1 (MQ=0)
GGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTTGCTGT > SRR10918230.5264490/1‑151 (MQ=0)
GGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTTGCTGT < SRR10918230.1111079/151‑1 (MQ=0)
GGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTTGCTGTCG > SRR10918230.2122936/1‑151 (MQ=0)
GGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTTGCTGTCG > SRR10918230.2247200/1‑151 (MQ=0)
GAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTTGCTGTCGATC > SRR10918230.3034837/1‑151 (MQ=0)
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GCAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTTGCTGTCGATC > CP009974/4536988‑4537285
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
