Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F1 I1 R1
|
404 |
265.1 |
10478538 |
96.8% |
10143224 |
150.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP009974 |
4,537,135 |
C→G |
L96L (CTG→CTC) |
RPPX_20270 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009974 | 4,537,135 | 0 | C | G | 100.0%
| 68.8
/ NA
| 26 | L96L (CTG→CTC) | RPPX_20270 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (11/15); total (11/15) |
CAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTG > CP009974/4536989‑4537159
|
cAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGc > 1:1692946/1‑151 (MQ=255)
cAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGc < 2:3906617/151‑1 (MQ=255)
cAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGc < 1:549569/151‑1 (MQ=255)
ggATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCa < 2:3016599/150‑1 (MQ=255)
aGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCa < 1:2407868/151‑1 (MQ=255)
aGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCa < 2:3685055/151‑1 (MQ=255)
gATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAg > 2:2069500/1‑151 (MQ=255)
aTGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGa < 1:4094082/151‑1 (MQ=255)
tGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGAt < 1:3326400/151‑1 (MQ=255)
ccATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATgg > 1:3901681/1‑151 (MQ=255)
ccATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATgg > 1:3901960/1‑151 (MQ=255)
aTACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGTCGGGGTGAGGCAGATGGCg < 1:862081/151‑1 (MQ=255)
tACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGt < 1:4001998/151‑1 (MQ=19)
ccAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGc > 2:191091/1‑151 (MQ=21)
cagcagAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCa < 1:191091/151‑1 (MQ=19)
cagcagAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCa > 2:3711785/1‑151 (MQ=18)
cagcagAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCa > 1:2994071/1‑151 (MQ=19)
atcagAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAg > 1:2879669/3‑151 (MQ=12)
cagAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTg > 2:2831209/1‑151 (MQ=17)
ggagGGCGACGGTCAGGTTGTGGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTGTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTgg < 2:2663356/150‑1 (MQ=255)
agagGGCGACGGTCAGGTTGTAGGGGAACGGCGCGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTgg < 2:2004258/151‑1 (MQ=9)
gagGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGc < 1:868553/151‑1 (MQ=17)
gagGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGc > 1:847188/1‑151 (MQ=17)
agGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGAGTGAGGCAGATGGCGTGCAGTGGCt > 1:2720625/1‑151 (MQ=12)
gggCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCtt < 2:139805/151‑1 (MQ=9)
ggCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTtg < 2:642921/151‑1 (MQ=2)
|
CAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTG > CP009974/4536989‑4537159
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGCAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTTGCTGTCGAT > CP009974/4536986‑4537284
|
CGGCAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGA > SRR10918231.3228773/1‑151 (MQ=46)
CAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGC > SRR10918231.1700738/1‑151 (MQ=39)
CAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGC < SRR10918231.551590/151‑1 (MQ=39)
AGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCA < SRR10918231.2418851/151‑1 (MQ=37)
ATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGA < SRR10918231.4113375/151‑1 (MQ=33)
TGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGAT < SRR10918231.3341481/151‑1 (MQ=31)
CCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGG > SRR10918231.3919851/1‑151 (MQ=27)
CCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGG > SRR10918231.3920136/1‑151 (MQ=27)
ATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGTCGGGGTGAGGCAGATGGCG < SRR10918231.865702/151‑1 (MQ=22)
TACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGT < SRR10918231.4020765/151‑1 (MQ=20)
CAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCA < SRR10918231.191781/151‑1 (MQ=16)
CAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCA > SRR10918231.3007803/1‑151 (MQ=16)
ATCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAG > SRR10918231.2892829/1‑151 (MQ=7)
GAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGC > SRR10918231.850721/1‑151 (MQ=5)
GAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGC < SRR10918231.872201/151‑1 (MQ=5)
AGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGAGTGAGGCAGATGGCGTGCAGTGGCT > SRR10918231.2733140/1‑151 (MQ=3)
CGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTG > SRR10918231.3854748/1‑151 (MQ=0)
GACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGC > SRR10918231.2874482/1‑151 (MQ=0)
ACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCC < SRR10918231.94400/151‑1 (MQ=0)
GGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCAC > SRR10918231.142001/1‑151 (MQ=0)
CAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGGGTGCAGTGGCTTGTGCCACCAG > SRR10918231.982605/1‑151 (MQ=0)
CAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAG > SRR10918231.5228139/1‑151 (MQ=0)
GTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTG < SRR10918231.1910669/151‑1 (MQ=0)
TTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGG < SRR10918231.4792973/151‑1 (MQ=0)
TGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGG > SRR10918231.1938350/1‑151 (MQ=0)
GGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCA < SRR10918231.905283/151‑1 (MQ=0)
GGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCA > SRR10918231.1127226/1‑151 (MQ=0)
AACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGG < SRR10918231.4859600/151‑1 (MQ=0)
AACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCGTAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGG < SRR10918231.2844176/151‑1 (MQ=0)
CACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGG > SRR10918231.968036/1‑151 (MQ=0)
GCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGA < SRR10918231.1715421/151‑1 (MQ=0)
CAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTT > SRR10918231.255591/1‑151 (MQ=0)
AACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGT < SRR10918231.2346183/151‑1 (MQ=0)
ACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTC > SRR10918231.62790/1‑151 (MQ=0)
ACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCAGGGGGGGTGTGTC > SRR10918231.3469309/1‑151 (MQ=0)
GGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGGCGGTTCGCCAGGGGGTATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCG < SRR10918231.5012672/151‑1 (MQ=0)
GCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCTGTTGGGTTCACCGGGCGGGGGGTGCTTGTCTGG > SRR10918231.3538478/1‑151 (MQ=0)
GCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGG < SRR10918231.1572312/151‑1 (MQ=0)
TGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGT > SRR10918231.135895/1‑151 (MQ=0)
TGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGT < SRR10918231.4691293/151‑1 (MQ=0)
GCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTG < SRR10918231.2371643/151‑1 (MQ=0)
CCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGG < SRR10918231.1766822/151‑1 (MQ=0)
CAGTTCGTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGT < SRR10918231.2586255/151‑1 (MQ=0)
AGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTC > SRR10918231.4024093/1‑151 (MQ=0)
GTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCC > SRR10918231.250657/1‑151 (MQ=0)
TTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCA > SRR10918231.4354826/1‑151 (MQ=0)
CTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATG < SRR10918231.955509/151‑1 (MQ=0)
TTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAA < SRR10918231.1012147/151‑1 (MQ=0)
TTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAA > SRR10918231.5103933/1‑151 (MQ=0)
TTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGT > SRR10918231.3550610/1‑151 (MQ=0)
TTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGT < SRR10918231.2641627/151‑1 (MQ=0)
TAGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCG < SRR10918231.1713413/151‑1 (MQ=0)
AGTGGCGCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGG < SRR10918231.110500/151‑1 (MQ=0)
TGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTT < SRR10918231.3835340/151‑1 (MQ=0)
GCCAGGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGT > SRR10918231.5021505/1‑151 (MQ=0)
GCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGT < SRR10918231.1001067/151‑1 (MQ=0)
GGCTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGT < SRR10918231.1906072/151‑1 (MQ=0)
CTTCTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTC < SRR10918231.4854420/151‑1 (MQ=0)
CTGCCGGGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTT < SRR10918231.1783885/151‑1 (MQ=0)
CTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTT < SRR10918231.478855/151‑1 (MQ=0)
CTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTT < SRR10918231.1232170/151‑1 (MQ=0)
CCGGGGTGCGGCAGATGGCGTGCAGTGGCTTGTGCCTCCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTTGCT < SRR10918231.5077524/151‑1 (MQ=0)
GGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTTGCTGTC < SRR10918231.4630711/151‑1 (MQ=0)
GGGTGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTTGCTGTC > SRR10918231.245006/1‑151 (MQ=0)
GGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTTGCTGTC < SRR10918231.1277080/151‑1 (MQ=0)
TGAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTTGCTGTCGAT < SRR10918231.5019494/151‑1 (MQ=0)
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CGGCAGATGCCATACCAGCAGAGGGCGACGGTCAGGTTGTAGGGGAACAGCACGGCCCAGAACGGCAATTGCCAGTTCTTTTTGCCCTGCATTTCACCGGGCTCGCCGGTTCGCCAGGGGGCATAGTGGCGCCAGGCTTCTGCCGGGGTCAGGCAGATGGCGTGCAGTGGCTTGTGCCACCAGTTGGGTTCACCGGGCGGGGGGAGTTTGTCCGGGCCGTGGTCCATGAAGTGGCGGAGGTATTCCCATACCTCGGCGACATGCTTGACGCCCGGTTCGGTGGGTTCGTTGCTGTCGAT > CP009974/4536986‑4537284
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
