Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F1 I1 R1
|
404 |
265.1 |
10478538 |
96.8% |
10143224 |
150.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP009974 |
1,984,399 |
T→C |
intergenic (+229/+55) |
RPPX_08865 → / ← RPPX_08870 |
hypothetical protein/SulP family inorganic anion transporter |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009974 | 1,984,399 | 0 | T | C | 99.5%
| 647.1
/ NA
| 195 | intergenic (+229/+55) | RPPX_08865/RPPX_08870 | hypothetical protein/SulP family inorganic anion transporter |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (108/85); total (109/86) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 198 total aligned reads displayed.
CTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCA > CP009974/1984251‑1984544
|
ctgctgGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCGGCTGGCCAAtctc > 2:130813/1‑151 (MQ=255)
gctgGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACCCGCATCGGTGGTTCGCCACAGCCCGTCGTAGGTGCGGGTTTACCCGCGACCGGGCCGGCCCTGCTGGCCAATCTccc > 1:335461/1‑150 (MQ=14)
ctgGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCAc > 1:978287/1‑151 (MQ=255)
ggCCCATCTCCGCCGGGCGATCAGCGTGGCCGCCGCGGCCGGCTTCGCGGGTAAACCCGTCCCGACGCACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCAccc < 2:3014196/151‑1 (MQ=14)
ggCCAATCTCCCCCCGCCGTTCACCGTGGCCGCCGCTACCGTAGTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCAccc < 2:1990341/151‑1 (MQ=255)
gCCCATCTCCGCCCGCCGTCCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACccg < 2:3833026/151‑1 (MQ=255)
ccAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACccgc < 1:4641632/151‑1 (MQ=255)
aTCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGt > 1:372771/1‑151 (MQ=255)
cccACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCa < 1:1147716/150‑1 (MQ=255)
ccACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCAc < 1:1549656/151‑1 (MQ=255)
ccACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCAc > 2:330599/1‑151 (MQ=255)
ccACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCCTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCAc > 2:1522752/1‑151 (MQ=255)
ccgccgTTCACCGTTGCCGCCGCTCCCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGtt < 1:4124495/151‑1 (MQ=255)
gccgTTCACCGTTGCGCCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgc < 1:2636360/151‑1 (MQ=255)
gccgTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgc > 2:88931/1‑151 (MQ=255)
cgTTCCCCGTTGCCGCCGATACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgccg < 1:748828/151‑1 (MQ=255)
cgTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCTGGCCAATCTCCACCCGCAGTTCACCGTTcccc > 2:4473626/1‑150 (MQ=255)
gTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCCATCTCCCCCCGCCGTTCACCGTTgccgc > 2:5115295/1‑151 (MQ=255)
gTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgccgc > 2:2302750/1‑151 (MQ=255)
gTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCAGCTGGCCAATCTCCACCCGCCGTTCACCGTTgccgc > 2:3269751/1‑151 (MQ=255)
ttCACCGTTGCCGCCGCTGCCGTATCCGCGGGTAAACCCGCCCCTCCGCACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgccgcc < 2:681315/151‑1 (MQ=14)
tCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCACTCTCCACCCGCCGTTCACCGTTgccgccc > 2:5081448/1‑150 (MQ=255)
tCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCa < 1:836121/151‑1 (MQ=255)
aCCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACt < 1:3740857/151‑1 (MQ=255)
gTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGCAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCCCCCCCAcc > 2:4262613/1‑151 (MQ=255)
gTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTAcc > 1:304395/1‑151 (MQ=255)
tGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGt > 1:56476/1‑151 (MQ=255)
tGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGt < 1:330599/151‑1 (MQ=255)
gccgcTACCGTCTTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTc < 1:1123555/151‑1 (MQ=255)
gccgcTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTc > 2:1087576/1‑151 (MQ=255)
ccctcTACCATATTCACTGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTc < 1:4313480/147‑1 (MQ=17)
cTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCTAATTTCCTCCCGCCGTTCACCGTTGCTGCCACTACTGTATTCGCgg > 1:1004076/1‑151 (MQ=255)
tACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTCTTCGCggg > 1:125874/1‑151 (MQ=255)
tACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTACTCCCggg > 2:832511/1‑151 (MQ=255)
aCCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGATTACCCGCGAAAGGGCCGGCCCTGCTCGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGt > 2:3445558/1‑151 (MQ=255)
ccGTATTGCCGGATAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCGCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTa < 2:1802379/151‑1 (MQ=17)
cGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTaa > 1:4926813/1‑151 (MQ=255)
cGTATGCGCGGGTAAACCCGCCCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTaa < 1:1658707/151‑1 (MQ=255)
tATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAAc < 1:3487399/151‑1 (MQ=255)
ttCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTCTGCGCGGGTAAAccc > 2:2869248/1‑151 (MQ=255)
ttCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAAccc > 1:3100819/1‑151 (MQ=255)
cgGGTAAACCCGCCCCTACACAGGTGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTc < 1:2191096/151‑1 (MQ=17)
gggTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTACACCCACTcc > 1:132060/1‑151 (MQ=255)
gggTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTcc > 1:1968841/1‑151 (MQ=255)
gggTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGCATTCGCGGGCAAACCCACTcc > 2:3659265/1‑151 (MQ=255)
ggTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCCCGGGTAAAccccgccct > 1:504492/1‑145 (MQ=255)
tAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTAc > 1:4110320/1‑151 (MQ=255)
aaCCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGc > 1:3669805/1‑151 (MQ=255)
gCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCaa > 1:1106373/1‑151 (MQ=255)
acacacacGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAAcccccc > 2:1685067/1‑150 (MQ=255)
cacacacGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGc > 1:2998626/1‑151 (MQ=255)
acacacGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCt > 1:1192825/1‑151 (MQ=255)
cacacGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTg > 2:2664361/1‑151 (MQ=255)
acacGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGt > 2:5219424/1‑151 (MQ=255)
acGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGGCAACCCACTCCTACGCCCCAACCCCCGCCGtcg > 1:4955810/1‑149 (MQ=255)
tgCATCGGTGGTGCGGCGCAGGCGGTCGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGt < 2:4206666/150‑1 (MQ=14)
gCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTcc < 2:4663131/127‑1 (MQ=255)
gCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGACGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTc > 2:4903826/1‑151 (MQ=255)
cATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTACTcc > 2:2893073/1‑151 (MQ=255)
cGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCTCGGGTAAACCCCCTCCTACCCCCCAACCCCCGCTGTAGTCCGCa > 1:2517894/1‑151 (MQ=255)
cGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCa > 1:4623638/1‑151 (MQ=255)
ggtggtTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCCGTAGTCCGCaa > 2:967046/1‑151 (MQ=255)
gtTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGc > 1:4234120/1‑151 (MQ=255)
cGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGcccc < 1:4219618/151‑1 (MQ=255)
gccgcggCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCt < 2:2002242/145‑1 (MQ=255)
gCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCAGTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGccccc > 2:4013064/1‑150 (MQ=255)
ccACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTc > 1:3453019/1‑151 (MQ=255)
acaGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGACCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTCCCGCCACTACCGTATTCGCGGGCAAACCCACTCCCACGCTCCAACCCCCGCTGTACTCCGCTACCGCCCCTCgc > 1:101983/1‑150 (MQ=18)
caGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGAt < 2:56476/151‑1 (MQ=255)
aGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATc > 2:1707639/1‑151 (MQ=255)
gCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATcc < 1:5099958/151‑1 (MQ=255)
cccGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGCCCGCAACCGCCCCTCGATCCg > 2:3553988/1‑151 (MQ=255)
ccGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCCGTAGTCCGGAACCGCCCCTCGATccta > 2:1751094/1‑149 (MQ=255)
ggtcgtAGGAGCGGGTTAACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGAc < 2:1042400/150‑1 (MQ=255)
gtcgtAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACg < 1:2013744/151‑1 (MQ=255)
tcgtAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGc > 1:4449496/1‑151 (MQ=255)
cgtGGGAGCGGGTTAACCCGCGAGGGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATGCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCt < 2:2723937/151‑1 (MQ=21)
gtAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCCACCGCCCCTCGATCCGACGCtt > 2:942746/1‑151 (MQ=255)
gtAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCtt < 1:47899/151‑1 (MQ=255)
aGGGGCGGGTTTGCCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCa < 1:1060039/151‑1 (MQ=255)
aGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCCATCCGACGCTTcc > 2:202438/1‑150 (MQ=255)
ggAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAg < 1:823404/151‑1 (MQ=255)
gAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAgg < 2:5233228/151‑1 (MQ=255)
ggTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGcgccg > 1:2234316/1‑151 (MQ=255)
ggTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGcgccg < 2:4739362/151‑1 (MQ=255)
gTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGcgccgc < 1:3269751/151‑1 (MQ=255)
ttgccccGCGAAGGGGCCGGCCCTGCTGGCCACTCTCCACCCGCCGTTCACCGGTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCgct < 2:1188276/147‑1 (MQ=25)
ttACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCGGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCgctg > 2:4700716/1‑151 (MQ=255)
tACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCgctgc < 1:658468/151‑1 (MQ=255)
ccGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGctct < 1:2969834/151‑1 (MQ=255)
gAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCa < 2:1962356/151‑1 (MQ=255)
aaGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGc > 1:276788/1‑151 (MQ=255)
gggCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCaa < 1:644815/151‑1 (MQ=255)
ggcgggccCTGCTGGCCAGTCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCACACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAAc < 2:2387561/151‑1 (MQ=255)
ggcgcgccCTGCGGCCCAAAAGCCGCCCGCCGTGCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCGCTCCTACGCCCCAACCCCCGCTGTAGTCCGCAGCCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAAc < 2:1913636/146‑1 (MQ=25)
ggccggccCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAAc < 1:3969059/151‑1 (MQ=255)
ccggccCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCCGCTCTATCAGCAAccc > 2:4247590/1‑150 (MQ=255)
ctgGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCAtt < 2:418866/151‑1 (MQ=255)
ccAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCa < 1:2302750/151‑1 (MQ=255)
ccAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCa > 1:4760512/1‑151 (MQ=255)
|
CTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCA > CP009974/1984251‑1984544
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCAGAATT > CP009974/1984250‑1984549
|
CCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCT > SRR10918231.1750649/1‑151 (MQ=60)
CTGCTGGCCAATCTCCGCCCGCCGTTCACCGTTGCCGCGGCTACCGTATTGGCGGGTAAACCCGCTCCGACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTGACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTC < SRR10918231.3755297/151‑1 (MQ=60)
CTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTGAACCCGCTCCTACGCACAGGCATCGGGGGTTCGCCACAGCCCGTC‑‑GTAGGGGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTC < SRR10918231.2855664/151‑1 (MQ=31)
CTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTC < SRR10918231.483681/151‑1 (MQ=60)
GCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCA < SRR10918231.2604193/151‑1 (MQ=60)
CTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCAC > SRR10918231.982597/1‑151 (MQ=60)
TGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACC < SRR10918231.4054531/151‑1 (MQ=60)
CCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGC < SRR10918231.4663836/151‑1 (MQ=60)
CAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCC < SRR10918231.769699/151‑1 (MQ=60)
CAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCC > SRR10918231.5259115/1‑151 (MQ=60)
ATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTGGCCACAGCCCGTC‑‑GTAGGAGCGGGGTTACCCGCGAAAGGGCCGGCCCCGCTTGCCAATCTCCACCCGCCag > SRR10918231.938979/1‑149 (MQ=60)
ATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCTACCCGCCGG > SRR10918231.938958/1‑151 (MQ=60)
ATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGT > SRR10918231.374111/1‑151 (MQ=60)
ttcactgttgccgccgctaccgtatttgcggttaaacccgcttttttttttcaagcagaagacggcatacgaggtcttcaccagtgactggagtttagacgtgtgctctcccgatcAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCG < SRR10918231.1939378/35‑1 (MQ=0)
cccccgCCCGCCGTTCACCGTTGCCGCCGCTCCGTTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTT < SRR10918231.4603173/145‑1 (MQ=60)
ccccccCCCGCCGTTCACCGTTGCCGCCGCTCCCGGATTCGCGGGTAAACCCGCCCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTT < SRR10918231.2168708/145‑1 (MQ=60)
CCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCA < SRR10918231.1153042/151‑1 (MQ=60)
CCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCAC < SRR10918231.1556785/151‑1 (MQ=60)
CCCCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACC < SRR10918231.206470/151‑1 (MQ=60)
CCGCCGTTCACCGTTGCCGCCGCTCCCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTT < SRR10918231.4143966/151‑1 (MQ=60)
CGCCCTGCACCGTGGCCGCCGCTAGCGTCCTCGCGGGTACACCCGGCCCTACACACTCGCATCGGTGGTTCGCCACAGCCCGCC‑‑GTAGGCGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTG < SRR10918231.808094/151‑1 (MQ=40)
GCCTTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGC < SRR10918231.2064230/151‑1 (MQ=60)
GCCGTTCACCGTTGCGCCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGC < SRR10918231.2648502/151‑1 (MQ=60)
GCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGC < SRR10918231.3032833/151‑1 (MQ=60)
CCGGTCACCGGTGCCGCCCCTACCCTATCCGCGGGTCAACCCGTTCCTGCATAGGCGCATCGGTGGTTCGCCGCAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCC < SRR10918231.1648561/151‑1 (MQ=8)
ggtgcgcggttggcgccgctgcgggattgGCGGGTAAACCCGCTGCTACACACGCGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCG < SRR10918231.4763367/122‑1 (MQ=60)
CGTTCCCCGTTGCCGCCGATACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCG < SRR10918231.751809/151‑1 (MQ=60)
TCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCA < SRR10918231.839587/151‑1 (MQ=60)
ACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACT < SRR10918231.3758034/151‑1 (MQ=60)
GTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACC > SRR10918231.305480/1‑151 (MQ=60)
GTTGCCGCCGCTACCCAATTCGCGGGTAAACCCGCACCTACACACGCGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACC < SRR10918231.1140651/151‑1 (MQ=60)
gtattcgggggtagccgggctgcgacacagatgggggggggacagacctctggggtgggacgcaggccgccggGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACTGTTGCCGCCGCTACC < SRR10918231.2065783/78‑1 (MQ=0)
TGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGT < SRR10918231.331795/151‑1 (MQ=60)
TGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGT > SRR10918231.56693/1‑151 (MQ=60)
gtcgtgggtaaacccggtgctagacggattgggggtggacgcacctctggggtggcagacaggccgccggGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACTGTTGCCGCCGCTACCGTA < SRR10918231.3084078/81‑1 (MQ=0)
tggcgggttgccgggcgggtccgcggatgggggggagacacttcagggagggtgggcgcaggccggcgtGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCACCACCGTAT < SRR10918231.231622/82‑1 (MQ=0)
ccctctaccatattcactGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTC < SRR10918231.4333951/133‑1 (MQ=60)
GCCGCTACCGTCTTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTC < SRR10918231.1128727/151‑1 (MQ=60)
GCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTC < SRR10918231.1126777/151‑1 (MQ=60)
CGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGCATTCGC > SRR10918231.3849265/1‑151 (MQ=60)
CTACCGTATTCGCGGGTCAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGG < SRR10918231.3338802/151‑1 (MQ=60)
CTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCTAATTTCCTCCCGCCGTTCACCGTTGCTGCCACTACTGTATTCGCGG > SRR10918231.1008557/1‑151 (MQ=60)
CTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGCTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGG > SRR10918231.650851/1‑151 (MQ=60)
TACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTCTTCGCGGG > SRR10918231.126332/1‑151 (MQ=60)
CGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAA > SRR10918231.4950591/1‑151 (MQ=60)
CGTATGCGCGGGTAAACCCGCCCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAA < SRR10918231.1666370/151‑1 (MQ=60)
TATTCGCGGGTAAACCCGCTCCTGCACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAAC < SRR10918231.3426075/151‑1 (MQ=60)
TATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAAC < SRR10918231.3503278/151‑1 (MQ=60)
TTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCC > SRR10918231.3114984/1‑151 (MQ=60)
CGGGTAAACCCGCCCCTACACAGGTGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTC < SRR10918231.2200922/151‑1 (MQ=56)
GGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTACACCCACTCC > SRR10918231.132537/1‑151 (MQ=60)
GGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCC > SRR10918231.412870/1‑151 (MQ=60)
GGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCC > SRR10918231.1977709/1‑151 (MQ=60)
GGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCGGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCC > SRR10918231.1306286/1‑151 (MQ=60)
GGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCCCGGGTAAACCCcgccct > SRR10918231.506288/1‑145 (MQ=60)
TAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTAC > SRR10918231.4129724/1‑151 (MQ=60)
AACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGC > SRR10918231.3686589/1‑151 (MQ=60)
ACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCC > SRR10918231.3470229/1‑151 (MQ=60)
cccgccacggCACACGCGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCC < SRR10918231.2607785/141‑1 (MQ=60)
ctgcccctgcgtaggtGCATCGGTGGTTCGCCGCAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCC < SRR10918231.3255579/135‑1 (MQ=25)
CCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCC > SRR10918231.3722289/1‑151 (MQ=60)
GCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAA > SRR10918231.1111445/1‑151 (MQ=60)
CTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGCTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAAC > SRR10918231.4993958/1‑151 (MQ=60)
ccccacgcacgtGCATCGGTGGTTCGGCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACC < SRR10918231.2712643/139‑1 (MQ=60)
CCGACGCACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCC < SRR10918231.2962775/151‑1 (MQ=60)
CCGACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCC < SRR10918231.4732194/151‑1 (MQ=60)
TACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCC < SRR10918231.1235405/151‑1 (MQ=60)
ACACACGCGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCG < SRR10918231.5191086/151‑1 (MQ=60)
CACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGC > SRR10918231.3012368/1‑151 (MQ=60)
CACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGC < SRR10918231.3285248/151‑1 (MQ=60)
ggacacacctctggggttggacacaggccgccgtGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCAagatcggaagagcacatgaatgaactcctgtcactggtggaggt > SRR10918231.554292/35‑107 (MQ=0)
ACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCT > SRR10918231.1198414/1‑151 (MQ=60)
ACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGGCAACCCACTCCTACGCCCCAACCCCCGCcgtcg > SRR10918231.4979766/1‑146 (MQ=60)
cacctctggggttggacacaggccgccgtGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCACCACCGTATTCGCGGGatcggcagcgcacacgcctgaactccggtcact > SRR10918231.1329460/30‑118 (MQ=0)
GCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCagatcggaagagcacacgtctgaa > SRR10918231.4685424/1‑127 (MQ=58)
ATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCG > SRR10918231.1554368/1‑151 (MQ=60)
CGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCTCGGGTAAACCCCCTCCTACCCCCCAACCCCCGCTGTAGTCCGCA > SRR10918231.2529459/1‑151 (MQ=60)
CGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCA > SRR10918231.4645745/1‑151 (MQ=60)
CGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCA < SRR10918231.830565/151‑1 (MQ=60)
GGTGGTTGGTCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTCCCACCCGCCGTTCACCGTTGCCGCCCCTACCGTATTCGCGGGTcacccagctcgtaacccgactagccgcgcgaccccgca > SRR10918231.3684314/1‑113 (MQ=0)
GGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAA < SRR10918231.2819069/151‑1 (MQ=60)
GGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAA < SRR10918231.2820199/151‑1 (MQ=60)
TGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACC > SRR10918231.4275780/1‑151 (MQ=60)
ggttggcctgAGCCCGTC‑‑GTAGGAGCGGGTTTTCCCGGGAAGGGGCCGTCCCTGCTGGCCACTCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCG < SRR10918231.3685524/141‑1 (MQ=60)
GGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCG > SRR10918231.2845238/1‑151 (MQ=60)
GTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGC > SRR10918231.4254122/1‑151 (MQ=60)
TTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTATACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCC > SRR10918231.975562/1‑151 (MQ=60)
TTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCCGTAGTCCGCAACCGCC > SRR10918231.1089438/1‑151 (MQ=60)
CGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCC > SRR10918231.2302181/1‑151 (MQ=60)
CGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCC < SRR10918231.4239539/151‑1 (MQ=60)
GCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGCCCGCAACCGCCCCC > SRR10918231.2376237/1‑151 (MQ=60)
CCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTC > SRR10918231.3468731/1‑151 (MQ=60)
accagagcccttccgatGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCT < SRR10918231.1211851/134‑1 (MQ=60)
ACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGACCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTCCCGCCACTACCGTATTCGCGGGCAAACCCACTCCCACGCTCCAACCCCCGCTGTACTCCGCTACCGCCCCTCGC > SRR10918231.102362/1‑151 (MQ=50)
GCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCC < SRR10918231.5124876/151‑1 (MQ=60)
CCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGA < SRR10918231.2202282/151‑1 (MQ=60)
CGTC‑‑GTAGGAGCGGTTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGAC < SRR10918231.2939959/151‑1 (MQ=60)
GTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACG < SRR10918231.2022787/151‑1 (MQ=60)
TC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGC > SRR10918231.4470617/1‑151 (MQ=60)
TC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGC > SRR10918231.309797/1‑151 (MQ=60)
C‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCT > SRR10918231.1994822/1‑151 (MQ=60)
GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAGTTTC < SRR10918231.2227011/48‑1 (MQ=0)
GTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTT < SRR10918231.48087/151‑1 (MQ=60)
AGGGGCGGGTTTGCCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCA < SRR10918231.1064833/151‑1 (MQ=60)
AGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCA > SRR10918231.1045212/1‑151 (MQ=60)
GGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAG < SRR10918231.826777/151‑1 (MQ=60)
AGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGC > SRR10918231.4372690/1‑151 (MQ=60)
GCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCG > SRR10918231.4245253/1‑151 (MQ=60)
GGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCG > SRR10918231.2244354/1‑151 (MQ=60)
GTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGC < SRR10918231.3284586/151‑1 (MQ=60)
GTTTACCCGCGAAAGGGCCGGCCCTGCTGCCCAATTTCC > SRR10918231.4140659/1‑39 (MQ=0)
GTTCACCCGCGAAAGGGCCTGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGC < SRR10918231.4164123/151‑1 (MQ=60)
TACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGC < SRR10918231.660990/151‑1 (MQ=60)
CCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCT < SRR10918231.2983448/151‑1 (MQ=60)
CGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATC > SRR10918231.4968440/1‑151 (MQ=60)
CGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTCCTCTACC > SRR10918231.2681152/1‑151 (MQ=60)
GAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCC > SRR10918231.1975136/1‑151 (MQ=60)
GAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCA < SRR10918231.636437/151‑1 (MQ=60)
AAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTAGCAG > SRR10918231.32619/1‑151 (MQ=60)
AAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGC > SRR10918231.277770/1‑151 (MQ=60)
AGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCG < SRR10918231.1939453/34‑1 (MQ=0)
GGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAA < SRR10918231.647263/151‑1 (MQ=60)
GGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAA < SRR10918231.3008946/151‑1 (MQ=60)
GGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAA < SRR10918231.1620799/151‑1 (MQ=60)
GGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAAC < SRR10918231.3987651/151‑1 (MQ=60)
GGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTG > SRR10918231.5097473/1‑151 (MQ=60)
CTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCC < SRR10918231.701289/151‑1 (MQ=60)
CTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCAAT > SRR10918231.4659578/1‑151 (MQ=60)
TGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTG < SRR10918231.1155641/151‑1 (MQ=60)
CCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCA > SRR10918231.4783820/1‑151 (MQ=60)
CCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCA > SRR10918231.4783300/1‑151 (MQ=60)
CCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCA < SRR10918231.2313186/151‑1 (MQ=60)
ATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCAGAA < SRR10918231.3755602/151‑1 (MQ=60)
CTCCACCCGCCGTTCACCGTTGCCGCCACTACCTTATTCGCTGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGATGCTCTATCAGCAACCGTGACGCATTGGCAGAATT > SRR10918231.401806/1‑151 (MQ=60)
CTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCAGAATT < SRR10918231.4506673/151‑1 (MQ=60)
CTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCAGAATT < SRR10918231.4506582/151‑1 (MQ=60)
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CCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTC‑‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCAGAATT > CP009974/1984250‑1984549
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |