Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F1 I1 R1 404 265.1 10478538 96.8% 10143224 150.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
JC CP009974 3,858,455 (GAAGCAA)5→13 intergenic (+458/+161) RPPX_17190 → / ← RPPX_17195 aspartate‑semialdehyde dehydrogenase/hypothetical protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009974 3858418 =43 (0.160)183 (0.790)
+CTTCTTGCTTCTTGCTTC		 125/264 1.0 79.5% intergenic (+421/+198) RPPX_17190/RPPX_17195 aspartate‑semialdehyde dehydrogenase/hypothetical protein
?CP009974 = 3858455 64 (0.240)intergenic (+458/+161) RPPX_17190/RPPX_17195 aspartate‑semialdehyde dehydrogenase/hypothetical protein

Only 100 of 257 total aligned reads displayed.

TTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009974/3858567‑3858418
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGT  <  CP009974/3858455‑3858306
                                                                                                                                                      ||||||||||||||||||                                                                                                                                                      
TTTTTGGTTACTTTTGGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGGAAAGGTGAGTCGGCGTCGCCATCGCGATTGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGC                                                                                                                                                                         <  2:4619632/151‑1
 TTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCGGCGTCGCCATCGCGATTGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCT                                                                                                                                                                        <  1:435541/151‑1
 TTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCT                                                                                                                                                                        >  1:390406/1‑151
  TTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGATTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTT                                                                                                                                                                       >  1:373386/1‑151
  TTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTT                                                                                                                                                                       <  2:1173573/151‑1
    TGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCT                                                                                                                                                                     <  1:3466808/151‑1
     GGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCGGCGTCGCCATCGCGATTGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTT                                                                                                                                                                    <  1:1240859/151‑1
     GGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTT                                                                                                                                                                    >  2:3607839/1‑151
     GGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTT                                                                                                                                                                    <  2:4351255/151‑1
     GGTTACTTTTGGTCGCGGTTGACAAAAGGTGACTCGCCGGAGGGGCGAAAAGGTGAGTCGGCGTCGCCATCGCGATTGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTT                                                                                                                                                                    <  2:1982073/151‑1
      GTTACTTCTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCGGCGTCGCCATCGCGATTGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG                                                                                                                                                                   <  2:365895/151‑1
       TTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCGGCGTCGCCATCGCGATTGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGC                                                                                                                                                                  <  1:1528009/151‑1
       TTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGC                                                                                                                                                                  >  1:4234981/1‑151
       TTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTGCTTGCTTCTTGC                                                                                                                                                                  >  1:332908/1‑151
        TACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTATTGCTTCTTGCTTCTTGCT                                                                                                                                                                 >  1:2328672/1‑151
         ACTTTTTGGCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCGGCGTCGCCATCGCGATTGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTT                                                                                                                                                                <  2:1033036/151‑1
         ACTTTTGGTCGCGTTTGACAAAAAGTGGCTCGCCGTAAGGGCGAAAAGGTGAGTCGGCGTCGCCATCGCGATTGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTT                                                                                                                                                                <  2:250406/151‑1
          CTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTC                                                                                                                                                               <  2:4825526/151‑1
           tgTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCT                                                                                                                                                              <  2:1223401/149‑1
           TTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCT                                                                                                                                                              >  1:610024/1‑151
            TTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCGGCGTCGCCATCGCGATTGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTT                                                                                                                                                             <  2:2750770/151‑1
            TTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCGGCGTCGCCATCGCGATTGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTT                                                                                                                                                             >  1:3357447/1‑151
            TTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCGGCGTCGCCATCGCGATTGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTT                                                                                                                                                             <  2:3074906/151‑1
            TTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTT                                                                                                                                                             <  1:1670774/151‑1
                  CGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCT                                                                                                                                                       >  1:4847744/1‑151
                  CGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCT                                                                                                                                                       <  2:4733980/151‑1
                      TTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCT                                                                                                                                                   >  2:5000660/1‑151
                       TTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGTGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGGCAAAACAGACGAATTTGCTTCTTGCTTCTTACTTCTTCCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTT                                                                                                                                                  >  1:3997493/1‑151
                           CAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTc                                                                                                                                              >  2:2001818/1‑150
                           CAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG                                                                                                                                              <  2:1774636/151‑1
                            AAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGC                                                                                                                                             >  2:3510238/1‑151
                               AAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTC                                                                                                                                          >  1:130695/1‑151
                               AAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTC                                                                                                                                          >  1:4533331/1‑151
                                     CTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTT                                                                                                                                    >  1:5006016/1‑151
                                      TCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTTCTTCTTGCTTCTTGCTTC                                                                                                                                   >  2:534862/1‑151
                                      TCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTC                                                                                                                                   >  1:851386/1‑151
                                       CGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCT                                                                                                                                  <  2:2364606/151‑1
                                       CGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCT                                                                                                                                  >  2:1092648/1‑151
                                       CGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCT                                                                                                                                  >  2:1823010/1‑151
                                        GCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTT                                                                                                                                 >  2:4129092/1‑151
                                          CGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGC                                                                                                                               >  1:4166214/1‑151
                                           GTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCATCTTGCT                                                                                                                              >  2:3222353/1‑151
                                              AAGGCGAAGAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCT                                                                                                                           <  1:1732185/151‑1
                                               AGGCGAAGAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTT                                                                                                                          <  2:2529221/151‑1
                                                  CGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTGGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCT                                                                                                                       >  2:4805998/1‑151
                                                   aAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTT                                                                                                                      >  1:4421873/2‑151
                                                   GAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTT                                                                                                                      >  2:1676164/1‑151
                                                    AAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTC                                                                                                                     <  1:3695051/151‑1
                                                    AAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTC                                                                                                                     <  2:2967895/151‑1
                                                       AGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG                                                                                                                  >  1:261616/1‑151
                                                          TGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGAT                                                                                                               >  2:4163243/1‑151
                                                                TGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGC                                                                                                         >  1:4500901/1‑151
                                                                TGTGTCGCCATCCGGAATGGACTGCTCGCTGAGTCAAATCAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGC                                                                                                         <  2:5153876/151‑1
                                                                  tggCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCAT                                                                                                       <  2:4449407/148‑1
                                                                  TGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTCGCTTTTTGCTGCTTCGTTGTGGGCAT                                                                                                       >  2:4566999/1‑151
                                                                   GTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATT                                                                                                      <  1:1152008/151‑1
                                                                     CGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCA                                                                                                    <  1:3083065/151‑1
                                                                        CATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACAC                                                                                                 >  1:4922276/1‑151
                                                                         ATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACC                                                                                                >  2:4339286/1‑151
                                                                          TCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCG                                                                                               <  1:1383810/151‑1
                                                                            GTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAG                                                                                             >  2:2660095/1‑151
                                                                             TGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGCTGTGTGCATTCTCGCCGAGc                                                                                            >  2:2413661/1‑150
                                                                                     CTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTC                                                                                    <  1:780358/151‑1
                                                                                       GTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCAT                                                                                  <  2:4938816/151‑1
                                                                                            CTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACG                                                                             <  1:545552/151‑1
                                                                                             TGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGC                                                                            >  1:4437867/1‑151
                                                                                                          ACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAG                                                               <  1:2099952/151‑1
                                                                                                                TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTTACGCAGCTGGAGCATAGTCACCT                                                         >  1:44699/1‑151
                                                                                                                 TGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTT                                                        <  1:2899153/151‑1
                                                                                                                  GCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTT                                                       <  2:851386/151‑1
                                                                                                                  GCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTT                                                       <  2:4234981/151‑1
                                                                                                                   CTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTC                                                      >  1:2972558/1‑151
                                                                                                                    TTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCC                                                     <  2:1584550/151‑1
                                                                                                                     TCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCG                                                    >  1:4287250/1‑151
                                                                                                                         GCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCT                                                >  1:4789612/1‑151
                                                                                                                          CTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTT                                               <  2:4478048/151‑1
                                                                                                                           TTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTA                                              >  1:2732098/1‑151
                                                                                                                             CTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACG                                            <  1:3225017/151‑1
                                                                                                                                GCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCG                                         <  1:4593701/151‑1
                                                                                                                                    CTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTC                                     <  1:306151/151‑1
                                                                                                                                     TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCC                                    >  1:4446052/1‑151
                                                                                                                                      TGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTGGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCC                                   >  2:3404413/1‑151
                                                                                                                                       GCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGTCGGGTCCCT                                  >  2:400864/1‑151
                                                                                                                                           CTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTT                              <  2:1433620/151‑1
                                                                                                                                           CTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAAGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTT                              <  1:3946469/151‑1
                                                                                                                                             TGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGT                            <  2:373386/151‑1
                                                                                                                                             TGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGT                            <  2:268259/151‑1
                                                                                                                                               CTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGTCG                          <  1:1980354/151‑1
                                                                                                                                                 TCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGTCGTG                        <  1:2785248/151‑1
                                                                                                                                                  CTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGTCGTGG                       <  1:1810479/151‑1
                                                                                                                                                  CTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGTCGTGG                       <  1:1366534/151‑1
                                                                                                                                                  CTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGTCGTGG                       <  2:3852497/151‑1
                                                                                                                                                   TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGTCGTGGC                      <  1:1092648/151‑1
                                                                                                                                                      CTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAA                   >  1:4196675/1‑151
                                                                                                                                                       TTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAA                  <  2:4018178/151‑1
                                                                                                                                                          TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCTAATAGG               >  2:2229256/1‑151
                                                                                                                                                                 TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAA        <  1:2413661/151‑1
                                                                                                                                                                   GCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAA      <  1:3177349/151‑1
                                                                                                                                                                    CTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAAC     >  1:5188788/1‑151
                                                                                                                                                                      TCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCG   >  1:1615479/1‑151
                                                                                                                                                      ||||||||||||||||||                                                                                                                                                      
TTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAAGGCGAAAAGGTGAGTATGTGTCGCCATCGTGAATGGACTGTTCGCTGAGTCAAAACAGACGAATTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009974/3858567‑3858418
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACACCGAGTAGGTATTCATTCACGCAGGTGGAGCATAGTCACCTTTCCGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGT  <  CP009974/3858455‑3858306

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

N/A