Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F1 I1 R1
|
404 |
265.1 |
10478538 |
96.8% |
10143224 |
150.7 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCTGCGCCTGTGAAATCGAGCGCCGCCAAGTGTCCGGCTCGACACATTCTGCGCCTATAAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATAATTGGCCCGAAACAAAC > CP009974/904148‑904425
|
aaggggaaaagaccgtatcggggctgccaagtgttcgccacgacagtttcagcgcctgtgagacCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACC < SRR10918231.2607615/87‑1 (MQ=0)
tttttggggggggtaaagcgagcgccggtccggcttaagttctgcggcggtgcgtAGATCGAGCACCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTT < SRR10918231.999414/96‑1 (MQ=0)
aaagaccgtatcggggctgccaagtgttcgccacgacagtttcagcgcctgtgagacCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGT < SRR10918231.230181/94‑1 (MQ=0)
tttggcggtgagatgtgtctgccataacccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGAC < SRR10918231.3623590/107‑1 (MQ=5)
ttggcggtgagatgtgtctgccataacccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACG < SRR10918231.4604126/108‑1 (MQ=5)
ggctaccaggtggccggcttgagatattcagcgcttatgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGAT < SRR10918231.3770288/112‑1 (MQ=3)
gctaccaggtggccggcttgagatattcagcgcttatgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATA < SRR10918231.1533533/113‑1 (MQ=3)
ctaccaggtggccggcttgagatattcagcgcttatgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATAT < SRR10918231.4454904/114‑1 (MQ=4)
tgagatgtgtctgccataacccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACagatcggaaga > SRR10918231.3460200/37‑140 (MQ=5)
taccaggtggccggcttgagatattcagcgcttatgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCagatcg > SRR10918231.1357514/37‑145 (MQ=3)
accaggtggccggcttgagatattcagcgcttatgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCG > SRR10918231.3102747/36‑151 (MQ=4)
agatgtgtctgccataacccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGA < SRR10918231.3020479/117‑1 (MQ=5)
gatgtgtctgccataacccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAG < SRR10918231.2900561/118‑1 (MQ=5)
atgtgtctgccataacccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGA < SRR10918231.3823499/119‑1 (MQ=7)
atgtatcacccataacccctgccgcgcctgtgaaATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGA < SRR10918231.1544008/117‑1 (MQ=9)
ggtggccggcttgagatattcagcgcttatgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGAT < SRR10918231.192658/120‑1 (MQ=9)
tgtctgccataacccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAG < SRR10918231.4953176/122‑1 (MQ=7)
tggccggcttgagatattcagcgcttatgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAG > SRR10918231.4071530/30‑151 (MQ=18)
gtctgccataccccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGG < SRR10918231.1666586/123‑1 (MQ=6)
ggccggcttgagatattcagcgcttatgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGG < SRR10918231.3021921/123‑1 (MQ=20)
tctgccataacccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGC < SRR10918231.2474875/124‑1 (MQ=6)
CCGGCTTGAGATATTCAGCGCTTATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCA < SRR10918231.3971035/151‑1 (MQ=20)
ggcttgagatattcagcgcttatgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAagatcg > SRR10918231.4178799/25‑145 (MQ=11)
ggcttgagatattcagcgcttatgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACC < SRR10918231.2900650/127‑1 (MQ=29)
gccataccccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACC < SRR10918231.3771332/127‑1 (MQ=18)
gccataccccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACC < SRR10918231.1121394/127‑1 (MQ=18)
gccataacccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACC < SRR10918231.1122768/127‑1 (MQ=18)
ccataacccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCA < SRR10918231.96854/128‑1 (MQ=20)
cacgacagtttcagcgcctgtgagacCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAA < SRR10918231.1034530/125‑1 (MQ=0)
cacgacagtttcagcgcctgtgagacCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAA > SRR10918231.3158930/27‑151 (MQ=0)
cacgacagtttcagcgcctgtgagacCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAA < SRR10918231.1034478/125‑1 (MQ=0)
tgagatattcagcgcttatgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCATTGTTGGTACGACGCGATATCGAGATAGGCACCAAGG < SRR10918231.4172030/131‑1 (MQ=36)
taacccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGG < SRR10918231.5241991/131‑1 (MQ=27)
aacccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGC < SRR10918231.360641/132‑1 (MQ=29)
cagtttcagcgcctgtgagacCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGT < SRR10918231.2533683/130‑1 (MQ=0)
ccctgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTT < SRR10918231.3170656/135‑1 (MQ=31)
ATATTCAGCGCTTATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTT < SRR10918231.1416742/151‑1 (MQ=40)
tattcagcgcttatgAGATCGAGCGCCGCCCGCTCGGCGCTTCGCGGGTAAACCCGCGTCTACGTTTGTTTCGGGCCAGTTCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTC < SRR10918231.2679445/136‑1 (MQ=60)
gtttcagcgcctgtgagacCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTC < SRR10918231.5092346/132‑1 (MQ=1)
tgcagcgcctgtgAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGC < SRR10918231.5186020/138‑1 (MQ=30)
TTCAGCGCTTATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGC < SRR10918231.104817/151‑1 (MQ=47)
cagcgcctgtgagacCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTCGCGC < SRR10918231.1382860/136‑1 (MQ=5)
cagcgcctgtgagacCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTCGCGC < SRR10918231.1383010/136‑1 (MQ=5)
cagcgcctgtgagacCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTCGCGC < SRR10918231.118342/136‑1 (MQ=5)
cagcgcctgtgagacCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTCGCGC < SRR10918231.3233117/136‑1 (MQ=5)
CAGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGC > SRR10918231.3508294/1‑151 (MQ=28)
ctgtgagacCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCATACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTCGCGCGCGAAT < SRR10918231.2471676/142‑1 (MQ=4)
TATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATC < SRR10918231.1521521/151‑1 (MQ=60)
TATGAGAGCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATC < SRR10918231.5105084/151‑1 (MQ=60)
ctggagttcagacgtgtgctcttccgatctGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTCGCGCGCGAATCCC < SRR10918231.990161/121‑1 (MQ=9)
AGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCAC < SRR10918231.1870143/151‑1 (MQ=60)
AGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCAC < SRR10918231.757226/151‑1 (MQ=60)
GCTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAATCCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACA < SRR10918231.3275808/151‑1 (MQ=60)
CGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGC < SRR10918231.2340777/151‑1 (MQ=60)
GGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCAT < SRR10918231.1714046/151‑1 (MQ=41)
AGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTCGCGCGCGAATCCCACAGGCAT < SRR10918231.811321/151‑1 (MQ=19)
AGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTCGCGCGCGAATCCCACAGGCAT < SRR10918231.4937901/151‑1 (MQ=19)
CGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaa < SRR10918231.397400/151‑3 (MQ=37)
GCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaat < SRR10918231.1241587/151‑4 (MQ=37)
GCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaat > SRR10918231.3790713/1‑148 (MQ=37)
CCGCCCGCGCGGCGCTTCGCGGGTAACCCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAG < SRR10918231.3055598/151‑1 (MQ=60)
CCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAG < SRR10918231.4447000/151‑1 (MQ=60)
CCGCCCGAGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGccccagtcgcgcgcgcccgccttggtcgtgcggtgcgcttacgcggcatgcgcctgcgcggtggcgcgcccatgcctcacggcctgcg > SRR10918231.1216418/1‑63 (MQ=0)
GCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTCGCGCGCGAATCCCACAGGCATaattgg < SRR10918231.51055/151‑7 (MQ=15)
acggcatacgagatcttcaccagtgactggagttcagacgtgtgctcttccgatCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaattggc < SRR10918231.5196338/97‑8 (MQ=44)
CCGCGCGGCGCTGCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAG < SRR10918231.4223667/151‑1 (MQ=60)
CGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTCGCGCGCGAATCCCACAGGCATaattggccc < SRR10918231.1327988/151‑10 (MQ=6)
CGCGCGGCGCTTCGCGGGAAAACCCGCTCCTACGTTTGGCTCGGGCCAGGCCGTCCCGTGCCTGGCGagccggaccacctcttaaggaggacacctgcaggtcgtaagagcccaggcctgcacgcccgtcaccggcggacatcgcgaatgg > SRR10918231.5025414/1‑67 (MQ=0)
GCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGCTCGCGCGCGAATCCCACAGGCATaattggcccg < SRR10918231.2271983/151‑11 (MQ=4)
CGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaattggcccga < SRR10918231.1954196/151‑12 (MQ=29)
CGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaattggcccga > SRR10918231.4408809/1‑140 (MQ=29)
GCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTCGCGCGCGAATCCCACAGGCATaattggcccgaa < SRR10918231.3052078/151‑13 (MQ=1)
CGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGGCCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaattggcccgaaa < SRR10918231.3452312/151‑14 (MQ=25)
CGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTCGCGCGCGAATCCCACAGGCATaattggcccgaaa < SRR10918231.246033/151‑14 (MQ=0)
GGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTCGCGCGCGAATCCCACAGGCATaattggcccgaaac < SRR10918231.1076880/151‑15 (MQ=0)
GGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaattggcccgaaac < SRR10918231.3114487/151‑15 (MQ=23)
GGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaattggcccgaaac < SRR10918231.3114311/151‑15 (MQ=23)
GGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGGACGACGCGATATCCAGATAGGCACCAAGGCGGTCGCGCGCAAACCCCACCGGCATCGAGgcaggcaccc > SRR10918231.2400276/1‑141 (MQ=58)
GCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTCGCGCGCGAATCCCACAGGCATaattggcccgaaaca > SRR10918231.1004706/1‑136 (MQ=0)
GCGCTTCGCGGGTAAACCCGCGCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaattggccagaaaca < SRR10918231.4501602/151‑16 (MQ=31)
CGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaattggcccgaaacaa < SRR10918231.1169171/151‑17 (MQ=19)
CGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaattggcccgaaacaa < SRR10918231.1169022/151‑17 (MQ=19)
CGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAG < SRR10918231.2741769/151‑1 (MQ=60)
GCTTCGCGGGTAAGCCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGGCCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGG < SRR10918231.3300353/151‑1 (MQ=60)
GCTTCGCGGGTAAACCCGCTCCTACGTTTGCTTCGGGCCAGTCCATCCTGCGCCTGGCGCGCGCGACCGCCCAGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTGGCGCGgaaagcccccacgcctcgagaacagcaccaagc > SRR10918231.2662475/1‑118 (MQ=28)
CTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTTGTTCGACGCGATATCGAGACAGGCACCAAAGCGTTCGCGCGCGCATCCCACAGGCATaattagcccgaaacaaac > SRR10918231.3232729/1‑133 (MQ=0)
CTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGAGATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGGGACAGGCACCAAGGC > SRR10918231.4087219/1‑151 (MQ=60)
CGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaattggcccgaaacaaacgta > SRR10918231.165884/1‑130 (MQ=6)
CGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTT > SRR10918231.3186005/1‑151 (MQ=60)
CGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCAGCCTGTGCCCGGCGCGCGCGACCGCCaggatggcccgacgcgataacgaggtgggagcgcaggcggtcgcccgcatatcccacacgcagcgggcagcgcgcccgggcggg > SRR10918231.4089708/1‑67 (MQ=0)
CGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaattggcccgaaacaaacgtagg > SRR10918231.3093832/1‑128 (MQ=1)
GGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaattggcccgaaacaaacgtagga > SRR10918231.2752454/1‑127 (MQ=0)
GGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaattggcccgaaacaaacgtagga < SRR10918231.3969916/151‑25 (MQ=0)
GGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGACAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATaattggcccgaaacaaacgtagga < SRR10918231.252517/151‑25 (MQ=0)
GGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGC < SRR10918231.4629963/151‑1 (MQ=60)
GTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGatcggaagagcacacgtc > SRR10918231.1008513/1‑133 (MQ=60)
TAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCG < SRR10918231.1969534/151‑1 (MQ=60)
AAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGAGAGGCACCAAGGCGTTCGCGCGC > SRR10918231.4245706/1‑151 (MQ=60)
AACCCGCTCGTACGTTTGTTTGGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCG < SRR10918231.4792026/151‑1 (MQ=60)
AACCCGCTCGTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCG < SRR10918231.3064972/151‑1 (MQ=60)
AACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCG < SRR10918231.3064986/151‑1 (MQ=60)
CCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAA < SRR10918231.4941563/151‑1 (MQ=60)
GCGCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCC < SRR10918231.3156053/151‑1 (MQ=60)
TCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCA < SRR10918231.2034477/151‑1 (MQ=60)
CCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCAC > SRR10918231.2161213/1‑151 (MQ=60)
CCTACGTGTGTTTCGGGCCAGTCCATCCTGTACCTGGCGCGCGCGCCCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCAC < SRR10918231.3603664/151‑1 (MQ=60)
CTCCGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACA < SRR10918231.3400074/151‑1 (MQ=60)
ACGTTTGTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGG < SRR10918231.4615863/151‑1 (MQ=60)
GTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACCGGCATAAT > SRR10918231.1416881/1‑151 (MQ=60)
GTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATAAT > SRR10918231.821079/1‑151 (MQ=60)
GTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATAAT > SRR10918231.818894/1‑151 (MQ=60)
GTTTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCAGCGCGATAGGCACCAAGGCGTTCGCGCGCGAATCCAACAGGCGTAAT > SRR10918231.1784654/1‑151 (MQ=60)
TTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATAATTG > SRR10918231.4955808/1‑151 (MQ=60)
TTCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATAATTG > SRR10918231.5234865/1‑151 (MQ=60)
TCGGGCCAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATAATTGG > SRR10918231.1946692/1‑151 (MQ=60)
CAGTCCATCCTGTGCGTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATAATTGGCCCGAA < SRR10918231.2219594/151‑1 (MQ=60)
CAGTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATAATTGGCCCGAA > SRR10918231.755173/1‑151 (MQ=60)
GTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTGCGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATAATTGGCCCGAAAC < SRR10918231.800362/151‑1 (MQ=60)
GTCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATAATTGGCCCGAAAC > SRR10918231.1548434/1‑151 (MQ=60)
TCCATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATAATTGGCCCGAAACA < SRR10918231.1021128/151‑1 (MQ=60)
CATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCTCGCGAATCCCCCAGGCATAATTGGCCCGAAACAAA > SRR10918231.1207280/1‑151 (MQ=60)
ATCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATAATTGGCCCGAAACAAAC > SRR10918231.2607633/1‑151 (MQ=60)
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TTCTGCGCCTGTGAAATCGAGCGCCGCCAAGTGTCCGGCTCGACACATTCTGCGCCTATAAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCCTCCTGTGCCTGGCGCGCGCGACCGCCTTGTTGGTACGACGCGATATCGAGATAGGCACCAAGGCGTTCGCGCGCAAATCCCACAGGCATCGAGATAGGCACCAAGGCGTTCGCGCGCGAATCCCACAGGCATAATTGGCCCGAAACAAAC > CP009974/904148‑904425
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
