Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F52 I0 R1 779 320.1 10410758 96.6% 10056792 149.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTT  >  CP009273/910511‑910805
                                                                                                                                                      |                                                                                                                                                 
CCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGG                                                                                                                                                   <  SRR19973057.733140/150‑1 (MQ=8)
 CCTGACGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGC                                                                                                                                                  <  SRR19973057.4876383/150‑1 (MQ=8)
 CCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGC                                                                                                                                                  <  SRR19973057.4876057/150‑1 (MQ=8)
  CTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCG                                                                                                                                                 <  SRR19973057.3224012/150‑1 (MQ=8)
    GAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑‑GGGGCGGCG                                                                                                                                              >  SRR19973057.4485981/1‑150 (MQ=7)
     AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCG                                                                                                                                              <  SRR19973057.3995850/150‑1 (MQ=8)
         CCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGA                                                                                                                                          <  SRR19973057.4568742/150‑1 (MQ=8)
          CGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGGC‑GGGGGCGGCGGCGGT                                                                                                                                         >  SRR19973057.2639713/1‑150 (MQ=7)
          CGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGAT                                                                                                                                         <  SRR19973057.3680601/150‑1 (MQ=8)
                AGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGGCCG                                                                                                                                   >  SRR19973057.279332/1‑150 (MQ=8)
                   CCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGGGCGCCC                                                                                                                                >  SRR19973057.1148483/1‑150 (MQ=8)
                    CACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGGCCGCCCC                                                                                                                               <  SRR19973057.4810368/150‑1 (MQ=8)
                       ATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGGCGGCGGCGATTGGCCGCCCCCT                                                                                                                             <  SRR19973057.642711/150‑1 (MQ=7)
                        TGGTTGTGGGCTGAGGGCGCGTTTTACTGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCTGCGGCTTTTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGGCCGCCCCCTGC                                                                                                                           <  SRR19973057.3395622/150‑1 (MQ=6)
                           ATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑CGGGGCGGCGGCGgattgacccccccctcgcc                                                                                                                        >  SRR19973057.2243088/1‑131 (MQ=8)
                                     AGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCCGAGCCCGGGGGTGGC‑GGGGGCGGCGGCGCTTGGCCGCCCCCCGCGCGCccccagcgc                                                                                                              >  SRR19973057.1787179/1‑141 (MQ=7)
                                     AGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGGC‑GGGGGCGGCCGGGATTGGGCGCCCCCAGCGCGCGCCATGCGC                                                                                                              >  SRR19973057.3108991/1‑150 (MQ=6)
                                         CGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCCGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTGGCCCCCCCCagcgcccgccctgcgccccg                                                                                                          >  SRR19973057.1035875/1‑130 (MQ=7)
                                         CGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑GGGGGCGGCGGCGATTGGCCCCCCCCCGCGCGCgccgtgcgcccgg                                                                                                          >  SRR19973057.3642672/1‑137 (MQ=7)
                                           CGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCATGCGCCAGTGG                                                                                                        >  SRR19973057.4765174/1‑150 (MQ=10)
                                            GTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAGTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTTGCCGCCCCCAGCGCGCGCCTTGCGCCCGGGGC                                                                                                       >  SRR19973057.4462984/1‑150 (MQ=6)
                                                  CAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCCGAGCCCGGGGGTGGA‑GGGGGCGGCGGGGATTGGCCCCCCCCAGCGCGCgccatgcgccccgggcaaaatt                                                                                                 >  SRR19973057.547545/1‑128 (MQ=7)
                                                  CAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTTGCCGCCCCCAGCGCGCTCCTGGCGCCACTGGCAAaatt                                                                                                 >  SRR19973057.547584/1‑146 (MQ=11)
                                                     GGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAGTTTGTTCGCCAGAGCCCGGGGGTGCA‑AGGGGCGGCGGCGcttgggcccccccagcccgccccagtcgccactggccatattgtg                                                                                              >  SRR19973057.3598850/1‑105 (MQ=9)
                                                       ATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑GGGGGCGGCGGCGcttgggccccccccgcgcgcgccgttcgccccggggaaaaattttct                                                                                            >  SRR19973057.4886538/1‑103 (MQ=9)
                                                       ATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTTGCCGCCCCCAGCGCGCTCCGTTCGCCAGGGGCAATATGTTGCT                                                                                            >  SRR19973057.4264742/1‑150 (MQ=26)
                                                       ATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑‑GGGGCGGCGGCGATTGGCCGCCCCCAGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTT                                                                                           >  SRR19973057.4922604/1‑150 (MQ=38)
                                                       ATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGGTCGCCAGAGCCCGGGGGTGCA‑‑GGGGCGGCGGCGATGGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTT                                                                                           >  SRR19973057.4922629/1‑150 (MQ=37)
                                                         GTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGGA‑GGGGGGGGCGGCGcatggcccccccccgcgcgcaccatgcgccccaggccaaaagtttctta                                                                                          >  SRR19973057.3599192/1‑101 (MQ=9)
                                                              CTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGGC‑GGGGGCGGCGGGGGTTGGGCGCCCCCAGCGCGCgccctgggccccgggcaaaaattttgttttcggc                                                                                     >  SRR19973057.876684/1‑116 (MQ=7)
                                                              CTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCCGCGGCGATTGGCCGCCCCCGGCGCGCTCCGTGCCCCAGTGGCAAaaagttgcattggtcc                                                                                     >  SRR19973057.4780247/1‑134 (MQ=18)
                                                                   GCCCGACCCGGTAGCCGTGAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑GGGGGCGGCGGCGCTTGGCCGCCCCCCGCGCGCaccgtgcgcccggggcaaaaagttgcatatcgacagaaa                                                                                >  SRR19973057.3638916/1‑111 (MQ=8)
                                                                     CCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGGCCCCCCCCAGCGCGCTCCTTGCGCCAGGGGCAAAATTTTGCTTAGCTCATGAAAGG                                                                              >  SRR19973057.5178867/1‑150 (MQ=36)
                                                                          CCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑‑GGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCA                                                                        <  SRR19973057.2512505/150‑1 (MQ=60)
                                                                          CCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑‑GGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCA                                                                        <  SRR19973057.2512530/150‑1 (MQ=60)
                                                                           CGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCCGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTGGGCGCCCCCcgcccgcgccctgcgcccggggcaaaaattttattatctcaagaaaggagcgca                                                                        >  SRR19973057.1893456/1‑96 (MQ=8)
                                                                           CGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGGA‑GGGGGCGGCGGCGGTTGGCCCCCCCCaccgcgcaccattcgcccatggcaaaaattttcttatatcaagaaaatagcgca                                                                        >  SRR19973057.1893916/1‑96 (MQ=8)
                                                                           CGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGGTTGGCCGCCCCCCGCGCGCTCCATGCGCCCGTGGCAAAATTTTTCTTAGCGCCTGAAAGGAGCGCA                                                                        >  SRR19973057.1893453/1‑150 (MQ=20)
                                                                            GGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGGCCGCCCCCAGCGCGCGCCATTCGCCAGTGGCAAAATTTTGCTTAGCTCATGAAAGGAGCGCAA                                                                       >  SRR19973057.4654084/1‑150 (MQ=51)
                                                                              TAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGGA‑GGGGGCGGCGGGGCTTTGCCGCCCCCCGCGCGCgccaagcgccacgggcaaaaatttgattatgtcaagaaaggggccccaaa                                                                     >  SRR19973057.3183027/1‑100 (MQ=7)
                                                                                 CCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTTGCCCCCCCCAGCGCCCACCTTGCGCCACTGGCAATATTTTTCTTATCTCCTGAAAGGAGCGCAACAACA                                                                  >  SRR19973057.685448/1‑150 (MQ=32)
                                                                                 CCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGGCCGCCCCCAGCCCGCTCCGTGCGCCcctggcaaaaagtttcgtagctccagacaggagcgcaacaaca                                                                  >  SRR19973057.2909686/1‑107 (MQ=8)
                                                                                  CGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCCGAGCCCGGGGGTGCA‑AGGGGCGGCCGCGCTTGGCCCCCCCCAGCGCGCgccaagagccactggcaaaaagtttcatatcaacagaaaggcgcgccacaaaat                                                                 >  SRR19973057.4197974/1‑96 (MQ=7)
                                                                                     AAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGAATGGCCGCCCCCCGCGCCCACCATGCGCCAGTGGCAAAATTTTTCTTATCTCATGAAAGGAGCGCAACAAGATGAT                                                              >  SRR19973057.2171190/1‑150 (MQ=47)
                                                                                     AAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑‑GGGGCGGCGGCGATTGGCCGCCCCCAGCGCGCTCCTTGCGCCAGTGGCAATATTTTTCTTAGCTCATGAAAGGAGCGCAACAAGATGATG                                                             >  SRR19973057.4443526/1‑150 (MQ=60)
                                                                                      AGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑TGGGGCGGCGGCGGTTGGCCCCCCCCAGCGCGCcacatgcgccacttgcaatatttttctttgctaagttaacggtcgcaaaaagattaat                                                             >  SRR19973057.1690154/1‑92 (MQ=8)
                                                                                      AGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGGCCGCCCCCAGCGCGCGCCATTCGCCAGGGGCAATATTTTTCTTATCTCATGAAAGGAGCGCAACAAAAAGATG                                                             >  SRR19973057.1690127/1‑150 (MQ=35)
                                                                                        GGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑‑GGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAT                                                          <  SRR19973057.4457677/150‑1 (MQ=60)
                                                                                          ATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGGGGCGGCGAATTGCCGCCCCCAGCGCCCTACATGCGCCCCTGGCAATATGTTtcttaagacaagtaaggagcgcaacaaaattattaatc                                                         >  SRR19973057.3281439/1‑112 (MQ=7)
                                                                                                CGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTGGCCGCCCCCagcgcccgccgtgcgcccgtggccaaatttttgttatcacaataaaggagcgcaaaaacattatgaatcaacaaa                                                   >  SRR19973057.578803/1‑75 (MQ=0)
                                                                                                CGAGGGCACCGCGCAGCGGCGAGTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGggggggcgcctgggcccccccggcccgcgccagtggccccgggcaacaagtttgttatctgatggaaatagggcaacaaaaaaattaaaaaaaaaa                                                   >  SRR19973057.4537708/1‑54 (MQ=0)
                                                                                                   GGGCACCGCGCAGCGGCGATTTTGTTCGCCCGAGCCCGGGGGTGCC‑GGGGGGGGCGGCGGTTGGCCGCCCCCCGCGCGCgccgtgccccactggcaaaatttttgttagctcatggaacgctcgcacaaaaattattaaaaaaacaaaaa                                                >  SRR19973057.4917363/1‑79 (MQ=0)
                                                                                                   GGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTTGCCGCCCCCAGCGCGCTCCTTTCGCCCGTGGCCAAAATTTTCTTTGGTCATGAAAGGAGCGCAACAAaattatttaaaaaaaaataa                                                >  SRR19973057.4516318/1‑130 (MQ=0)
                                                                                                    GGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTTGCCCCCCCCAGCGCGCTCCATTCGCCCCTGGCAAAAAGTTGCTTAGCTCATGAAAGGGGCGCAAAAAGATGATtaataaaaaaataaa                                               >  SRR19973057.246780/1‑135 (MQ=22)
                                                                                                    GGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCCATTGGCCGCCCCCAGCGCGCGCCATGCGCCAGTGGCAAAAATTTTCTTATCTCAAGAAAGGAGCGCAACAAaaatatgaaacaaaaaaaaaa                                               >  SRR19973057.246760/1‑129 (MQ=9)
                                                                                                      CACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGGCCGCCCCCAGCGCGCGCCGTGCGCCACTGGCAATATTTTTCTTATCTCAAGAAAGGAGCGCAACAAGAATATGAATAAACAAATAACAA                                             >  SRR19973057.3474456/1‑150 (MQ=28)
                                                                                                                CGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑‑GGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAA                                  >  SRR19973057.806873/1‑150 (MQ=60)
                                                                                                                 GGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGGCCGCCCCCAGCGCGCGCCTTGCGCCAGTGGCAAAATTTTTCTTAGCGCATGAAAGGAGCGCAACAAtattattaataaacaaataacaaaaaaataaaaa                                  >  SRR19973057.2032786/1‑116 (MQ=33)
                                                                                                                    GATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGGCCGCCCCCAGCGCGCTCCATGCGCCAGTTGCAATATTTTTCGTAGCACATGAAAGGAGCGCAACAAGAAGATTAAACAACATATAACAACAACTTAAAAAAAA                               >  SRR19973057.2885965/1‑150 (MQ=46)
                                                                                                                        TTGTTCGCCAGAGCCCGGGGGTGCA‑‑GGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTG                          <  SRR19973057.2723412/150‑1 (MQ=60)
                                                                                                                         TGTTCGCCAGAGCCCGGGGGTGCC‑GGGGGCGGCGGCGCTTGGCCGCCCCCAGCGCGCTCCTTGCGCCCGTGGCAAGAAGTTGCTTATGTCATGAAAGGAGCGCAACAATAATATGAATAAACATATAAAAACAACATAAAAAAAGGCCTG                          >  SRR19973057.1127339/1‑150 (MQ=33)
                                                                                                                         TGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGGCCCCCCCCAGCGCGCGCCATGCGCCAGTGGCAAAATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATTATGAATCAACAAATAACAACATCTTAAAAAAAGGCCAG                          >  SRR19973057.3733474/1‑150 (MQ=60)
                                                                                                                                               CA‑GGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAGCAACATATAACAACCTCTGAAAAAAAGGCCTGACATTACGCCCGGCCGTCTGCG    >  SRR19973057.1865169/1‑150 (MQ=60)
                                                                                                                                                  GGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTT  >  SRR19973057.2583627/1‑150 (MQ=60)
                                                                                                                                                      |                                                                                                                                                 
CCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTT  >  CP009273/910511‑910805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑