Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F309 I0 R1 1697 197.2 6627756 95.7% 6342762 147.9

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGC  >  CP009273/3841272‑3841565
                                                                                                                                                                        |                                                                                                                                                  
CGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAACC                                                                                                                                                  >  SRR19973070.505562/1‑150 (MQ=60)
  CGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAAccag                                                                                                                                                <  SRR19973070.2589504/150‑5 (MQ=60)
  CGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCAT                                                                                                                                                >  SRR19973070.757748/1‑150 (MQ=60)
   GTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAAccagc                                                                                                                                               >  SRR19973070.213934/1‑145 (MQ=60)
     CAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAAccagcaa                                                                                                                                             >  SRR19973070.2729191/1‑143 (MQ=60)
     CAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCACCACAGAAAAAACCCCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAAccaccaa                                                                                                                                             >  SRR19973070.131442/1‑143 (MQ=60)
     CAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACCCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAAccagcaa                                                                                                                                             >  SRR19973070.129210/1‑143 (MQ=60)
            GCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAAccagcaatcatcat                                                                                                                                      <  SRR19973070.2650799/150‑15 (MQ=60)
              CCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCC                                                                                                                                           <  SRR19973070.1839611/150‑1 (MQ=60)
               CCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCC                                                                                                                                          >  SRR19973070.377309/1‑150 (MQ=60)
               CCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCC                                                                                                                                          >  SRR19973070.2207277/1‑150 (MQ=60)
                   CTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCA                                                                                                                                      <  SRR19973070.2610257/150‑1 (MQ=60)
                   CTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCA                                                                                                                                      <  SRR19973070.2610110/150‑1 (MQ=60)
                   CTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCA                                                                                                                                      <  SRR19973070.2610045/150‑1 (MQ=60)
                    TTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCAC                                                                                                                                     <  SRR19973070.1066388/150‑1 (MQ=60)
                                AATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAAT                                                                                                                         <  SRR19973070.1927155/150‑1 (MQ=60)
                                 ATTTCCAGCGCGTCGTGTCGCCATTCCCCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATG                                                                                                                        <  SRR19973070.910074/150‑1 (MQ=60)
                                 ATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATG                                                                                                                        <  SRR19973070.61531/150‑1 (MQ=60)
                                          GCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGC                                                                                                               <  SRR19973070.1468285/150‑1 (MQ=60)
                                            GTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCAT                                                                                                      >  SRR19973070.19070/1‑150 (MQ=60)
                                            GTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGACAT                                                                                                      >  SRR19973070.3257648/1‑150 (MQ=60)
                                              CGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCT                                                                                                           >  SRR19973070.2291952/1‑150 (MQ=60)
                                                TGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGC                                                                                                         >  SRR19973070.2452103/1‑150 (MQ=60)
                                                     CCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCA                                                                                                    <  SRR19973070.1294883/150‑1 (MQ=60)
                                                      CATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCAC                                                                                                   <  SRR19973070.1860327/150‑1 (MQ=60)
                                                       ATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACA                                                                                                  >  SRR19973070.804402/1‑150 (MQ=60)
                                                       ATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACA                                                                                                  >  SRR19973070.804397/1‑150 (MQ=60)
                                                         TCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAAT                                                                                                <  SRR19973070.737431/150‑1 (MQ=60)
                                                         TCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAAT                                                                                                >  SRR19973070.2194445/1‑150 (MQ=60)
                                                          CACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATG                                                                                               >  SRR19973070.3220391/1‑150 (MQ=60)
                                                           ACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGG                                                                                              <  SRR19973070.2255817/150‑1 (MQ=60)
                                                           ACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGG                                                                                              <  SRR19973070.2255820/150‑1 (MQ=60)
                                                           ACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAG                                                                                       <  SRR19973070.1294410/150‑1 (MQ=60)
                                                             CGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGA                                                                                            <  SRR19973070.1930545/150‑1 (MQ=60)
                                                                CCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATG                                                                                         <  SRR19973070.3294169/150‑1 (MQ=60)
                                                                CCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATG                                                                                         <  SRR19973070.1645995/150‑1 (MQ=60)
                                                                  GCCGTTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAG                                                                                       <  SRR19973070.2813550/150‑1 (MQ=60)
                                                                  GCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAG                                                                                       <  SRR19973070.580107/150‑1 (MQ=60)
                                                                      GTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCG                                                                                   <  SRR19973070.1299888/150‑1 (MQ=60)
                                                                      GTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCG                                                                                   <  SRR19973070.1991760/150‑1 (MQ=60)
                                                                      GTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCG                                                                                   <  SRR19973070.1299956/150‑1 (MQ=60)
                                                                      GTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCG                                                                                   <  SRR19973070.1299972/150‑1 (MQ=60)
                                                                        AAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCC                                                                                 >  SRR19973070.1016703/1‑150 (MQ=60)
                                                                        AAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCC                                                                                 <  SRR19973070.1334532/150‑1 (MQ=60)
                                                                        AAACCGAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCAGA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAGCAACCATCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCC                                                                                 <  SRR19973070.1758865/150‑1 (MQ=60)
                                                                            CTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCG                                                                             >  SRR19973070.3018776/1‑150 (MQ=60)
                                                                                   CTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTAT                                                                      <  SRR19973070.2284088/150‑1 (MQ=60)
                                                                                   CTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTAT                                                                      <  SRR19973070.97465/150‑1 (MQ=60)
                                                                                   CTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTAT                                                                      <  SRR19973070.98113/150‑1 (MQ=60)
                                                                                    TGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATG                                                                     >  SRR19973070.689658/1‑150 (MQ=60)
                                                                                     GCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGC                                                                    <  SRR19973070.2643202/150‑1 (MQ=60)
                                                                                       GGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGC                                                                  >  SRR19973070.3029511/1‑150 (MQ=60)
                                                                                         GCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCG                                                                <  SRR19973070.2136532/150‑1 (MQ=60)
                                                                                           GATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTG                                                              >  SRR19973070.3229563/1‑150 (MQ=60)
                                                                                           GATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTG                                                              >  SRR19973070.2675772/1‑150 (MQ=60)
                                                                                           GATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTG                                                              >  SRR19973070.1810695/1‑150 (MQ=60)
                                                                                                  TAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATA                                                       >  SRR19973070.115761/1‑150 (MQ=60)
                                                                                                   AGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAA                                                      >  SRR19973070.2644219/1‑150 (MQ=60)
                                                                                                   AGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAA                                                      >  SRR19973070.457284/1‑150 (MQ=60)
                                                                                                    GCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAAT                                                     <  SRR19973070.2888318/150‑1 (MQ=60)
                                                                                                    GCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAAT                                                     <  SRR19973070.2888506/150‑1 (MQ=60)
                                                                                                       GCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCC                                                  <  SRR19973070.821335/150‑1 (MQ=60)
                                                                                                         CAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCA                                                <  SRR19973070.836858/150‑1 (MQ=60)
                                                                                                          AGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCAC                                               >  SRR19973070.1269419/1‑150 (MQ=60)
                                                                                                          AGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCAC                                               >  SRR19973070.1269437/1‑150 (MQ=60)
                                                                                                            CAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCA                                             >  SRR19973070.679572/1‑150 (MQ=60)
                                                                                                            CAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCA                                             >  SRR19973070.2700854/1‑150 (MQ=60)
                                                                                                            CAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCA                                             >  SRR19973070.338939/1‑150 (MQ=60)
                                                                                                            CAGAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCA                                             >  SRR19973070.338918/1‑150 (MQ=60)
                                                                                                            CAGAGAAAAATCCCCACGACAATCGCCATA‑‑‑‑‑‑‑CAACCAGAAACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCCCAATGGGAATGAGAGCGCCGCCGACGTTATGCGCCGTGTTCCAAAATGCCCACCA                                             >  SRR19973070.1363778/1‑150 (MQ=60)
                                                                                                              GAGAAAAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAAC                                           <  SRR19973070.1205584/150‑1 (MQ=60)
                                                                                                                GAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCT                                  >  SRR19973070.1998785/1‑150 (MQ=60)
                                                                                                                   AAATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCG                                      <  SRR19973070.1900077/150‑1 (MQ=60)
                                                                                                                    AATCCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGC                                     >  SRR19973070.1904075/1‑150 (MQ=60)
                                                                                                                       CCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCT                                  >  SRR19973070.125016/1‑150 (MQ=60)
                                                                                                                       CCCCACGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCT                                  >  SRR19973070.3109514/1‑150 (MQ=60)
                                                                                                                         CCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTG                         <  SRR19973070.2996690/150‑1 (MQ=60)
                                                                                                                         CCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTG                         <  SRR19973070.1338675/150‑1 (MQ=60)
                                                                                                                         CCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTG                         <  SRR19973070.1239853/150‑1 (MQ=60)
                                                                                                                           ACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAA                       <  SRR19973070.430818/150‑1 (MQ=60)
                                                                                                                            CGACTATCGCCATACAACCAGC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTA                             >  SRR19973070.2130821/1‑150 (MQ=60)
                                                                                                                                     ccatacaaccagC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATAC                    >  SRR19973070.1774324/13‑150 (MQ=60)
                                                                                                                                     ccatacaaccagC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATAC                    >  SRR19973070.1446734/13‑150 (MQ=60)
                                                                                                                                       atacaaccagC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCA                  >  SRR19973070.1723827/11‑150 (MQ=60)
                                                                                                                                       atacaaccagC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCA                  >  SRR19973070.1722401/11‑150 (MQ=60)
                                                                                                                                       atacaaccagC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCA                  <  SRR19973070.482224/140‑1 (MQ=60)
                                                                                                                                         acaaccagC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGG                >  SRR19973070.1607278/9‑150 (MQ=60)
                                                                                                                                         acaaccagC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGG                >  SRR19973070.1606093/9‑150 (MQ=60)
                                                                                                                                           aaccagC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCC              >  SRR19973070.2072137/7‑150 (MQ=60)
                                                                                                                                             ccagC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGT            >  SRR19973070.2057425/5‑150 (MQ=60)
                                                                                                                                             ccagC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGT            >  SRR19973070.2057457/5‑150 (MQ=60)
                                                                                                                                             ccagC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGT            >  SRR19973070.2057389/5‑150 (MQ=60)
                                                                                                                                              cagC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTT           <  SRR19973070.2949626/147‑1 (MQ=60)
                                                                                                                                               agC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTA          <  SRR19973070.1259795/148‑1 (MQ=60)
                                                                                                                                               agC‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTA          <  SRR19973070.1259933/148‑1 (MQ=60)
                                                                                                                                                 C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAAC        <  SRR19973070.835995/150‑1 (MQ=60)
                                                                                                                                                 C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAAC        <  SRR19973070.1289372/150‑1 (MQ=60)
                                                                                                                                                           CCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGA     <  SRR19973070.1444397/150‑1 (MQ=60)
                                                                                                                                                            CAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGAC    <  SRR19973070.1936325/150‑1 (MQ=60)
                                                                                                                                                              G‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGC  >  SRR19973070.142240/1‑150 (MQ=60)
                                                                                                                                                                        |                                                                                                                                                  
CGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑C‑‑‑‑‑‑‑AACCAG‑‑‑‑‑‑‑CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGC  >  CP009273/3841272‑3841565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑